BLASTX nr result

ID: Atractylodes22_contig00012878 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00012878
         (1421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280795.2| PREDICTED: uncharacterized protein LOC100263...   323   7e-86
ref|XP_002319537.1| predicted protein [Populus trichocarpa] gi|2...   318   2e-84
ref|XP_002512380.1| pentatricopeptide repeat-containing protein,...   316   1e-83
emb|CAN60541.1| hypothetical protein VITISV_018290 [Vitis vinifera]   313   9e-83
ref|XP_004156421.1| PREDICTED: putative pentatricopeptide repeat...   296   1e-77

>ref|XP_002280795.2| PREDICTED: uncharacterized protein LOC100263014 [Vitis vinifera]
           gi|296088328|emb|CBI36773.3| unnamed protein product
           [Vitis vinifera]
          Length = 265

 Score =  323 bits (828), Expect = 7e-86
 Identities = 161/229 (70%), Positives = 181/229 (79%)
 Frame = -1

Query: 965 FSSNTNKQFRVNSVRDSSGDQTTMSTSSAYQVLDVMPDCTLSDLKAAFRAKVKQFHPDVR 786
           FSS++  +F VN  RD +G++  +S SSAY VL V P C+  +LKAAFRAKVKQFHPDV 
Sbjct: 39  FSSSSTSRFTVNC-RDRTGEEPKLSDSSAYAVLGVDPSCSAPELKAAFRAKVKQFHPDVN 97

Query: 785 KSDDDSSDTMIRRVIQAYXXXXXXXXXXXXXXECLDPFDAPECVAFDIFVNEVLCVGKGC 606
           K   DS D MIR VIQAY              ECLDPFD PEC AFD+FVNEVLCVGKGC
Sbjct: 98  KEGGDS-DKMIRLVIQAYELLSCCSRSEIIERECLDPFDEPECEAFDLFVNEVLCVGKGC 156

Query: 605 PYSCVKTAPHAFTFSSATGTAYATSQGHGEDYQVQLAVGQCPRSCIHYVTPSQRVILEEL 426
           PYSCV  APHAFTF S+TGTA ATSQGHGEDYQVQLAVGQCPRSCIHYVTPSQR++LEEL
Sbjct: 157 PYSCVNKAPHAFTFVSSTGTARATSQGHGEDYQVQLAVGQCPRSCIHYVTPSQRIVLEEL 216

Query: 425 IASILNVPFDCSAEADLLYSLIIKAKFENNRYRKPKKQPNVSTQHVDWY 279
           + SIL+ P+D SAEADLLYSLI+KA+FENNRY+KPK QP  STQHVDW+
Sbjct: 217 LDSILDTPYDTSAEADLLYSLIVKARFENNRYQKPKNQPKGSTQHVDWF 265


>ref|XP_002319537.1| predicted protein [Populus trichocarpa] gi|222857913|gb|EEE95460.1|
            predicted protein [Populus trichocarpa]
          Length = 266

 Score =  318 bits (816), Expect = 2e-84
 Identities = 169/276 (61%), Positives = 203/276 (73%), Gaps = 4/276 (1%)
 Frame = -1

Query: 1094 SLCSFYQAQPPI--FKRI--HHHKCQQRPFESSFQWRVRSTIEYPHRFSSNTNKQFRVNS 927
            SLC FY + PPI  F++   + + C   P +         TI      S +T+ +F+ + 
Sbjct: 3    SLC-FYSSLPPIPPFQKTVTNPNNCHNFPSK---------TIPIRLFPSLSTSSKFKPHC 52

Query: 926  VRDSSGDQTTMSTSSAYQVLDVMPDCTLSDLKAAFRAKVKQFHPDVRKSDDDSSDTMIRR 747
            +  +  D + +STSSAY VL + P C+ + +KAAFRAKVKQFHPD+ K D   SD MIRR
Sbjct: 53   LGRAEED-SPLSTSSAYTVLGIKPGCSAAAIKAAFRAKVKQFHPDLNK-DGKVSDLMIRR 110

Query: 746  VIQAYXXXXXXXXXXXXXXECLDPFDAPECVAFDIFVNEVLCVGKGCPYSCVKTAPHAFT 567
            VIQAY              ECLDPF+ PEC AFDIFVNEVLCVGKGCPYSCV+ AP+AFT
Sbjct: 111  VIQAYEMLSNFSRPEIIERECLDPFEEPECEAFDIFVNEVLCVGKGCPYSCVQRAPYAFT 170

Query: 566  FSSATGTAYATSQGHGEDYQVQLAVGQCPRSCIHYVTPSQRVILEELIASILNVPFDCSA 387
            ++S+TGTA ATSQGHGEDYQVQLAVGQCPRSCIHYVTPSQR+ILEEL+ SIL VP+DCSA
Sbjct: 171  YASSTGTARATSQGHGEDYQVQLAVGQCPRSCIHYVTPSQRIILEELLDSILEVPYDCSA 230

Query: 386  EADLLYSLIIKAKFENNRYRKPKKQPNVSTQHVDWY 279
            EADLLYSLI+KA+FENNR+RKPKKQP  ST+HVDW+
Sbjct: 231  EADLLYSLIVKARFENNRFRKPKKQPKTSTEHVDWF 266


>ref|XP_002512380.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223548341|gb|EEF49832.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 736

 Score =  316 bits (809), Expect = 1e-83
 Identities = 156/232 (67%), Positives = 180/232 (77%)
 Frame = -1

Query: 974  PHRFSSNTNKQFRVNSVRDSSGDQTTMSTSSAYQVLDVMPDCTLSDLKAAFRAKVKQFHP 795
            P RF S++N +F VN       D    S+S+A+ VL V P C+ ++LKAAFRAKVKQFHP
Sbjct: 506  PLRFPSHSNSKFTVNCSERIGDDTPLSSSSAAHMVLGVDPGCSAAELKAAFRAKVKQFHP 565

Query: 794  DVRKSDDDSSDTMIRRVIQAYXXXXXXXXXXXXXXECLDPFDAPECVAFDIFVNEVLCVG 615
            DV + D    DTMIRRVIQAY              ECLDPFD PEC AFDIFVNEVLC G
Sbjct: 566  DVNR-DRKFPDTMIRRVIQAYEILSNFSRSEIIESECLDPFDNPECEAFDIFVNEVLCAG 624

Query: 614  KGCPYSCVKTAPHAFTFSSATGTAYATSQGHGEDYQVQLAVGQCPRSCIHYVTPSQRVIL 435
            KGCPYSCV+TAPHAF ++S+TGTA A SQGHGEDY+VQLAVGQCPRSCIHYVTPSQR+IL
Sbjct: 625  KGCPYSCVQTAPHAFAYASSTGTARAISQGHGEDYKVQLAVGQCPRSCIHYVTPSQRIIL 684

Query: 434  EELIASILNVPFDCSAEADLLYSLIIKAKFENNRYRKPKKQPNVSTQHVDWY 279
            EEL+ SIL VP+D SAEAD+LYSLI+KA +ENNRY+KPKKQP  STQHV+W+
Sbjct: 685  EELLDSILGVPYDNSAEADMLYSLIVKATYENNRYQKPKKQPKTSTQHVEWF 736


>emb|CAN60541.1| hypothetical protein VITISV_018290 [Vitis vinifera]
          Length = 322

 Score =  313 bits (801), Expect = 9e-83
 Identities = 157/225 (69%), Positives = 177/225 (78%)
 Frame = -1

Query: 965 FSSNTNKQFRVNSVRDSSGDQTTMSTSSAYQVLDVMPDCTLSDLKAAFRAKVKQFHPDVR 786
           FSS++  +F VN  RD +G++  +S SSAY VL V P C+ ++LKAAFRAKVKQFHPDV 
Sbjct: 38  FSSSSTSRFTVNC-RDRTGEEPKLSDSSAYAVLGVDPSCSAAELKAAFRAKVKQFHPDVN 96

Query: 785 KSDDDSSDTMIRRVIQAYXXXXXXXXXXXXXXECLDPFDAPECVAFDIFVNEVLCVGKGC 606
           K   DS D MIR VIQAY              ECLDPFD PEC AFD+FVNEVLCVG GC
Sbjct: 97  KEGGDS-DKMIRLVIQAYELLSCCSRSEIIERECLDPFDEPECEAFDLFVNEVLCVGNGC 155

Query: 605 PYSCVKTAPHAFTFSSATGTAYATSQGHGEDYQVQLAVGQCPRSCIHYVTPSQRVILEEL 426
           PYSCV  APHAFTF S+TGTA ATSQGHGEDYQVQLAVGQCPRSCIHYVTPSQR++LEEL
Sbjct: 156 PYSCVNKAPHAFTFVSSTGTARATSQGHGEDYQVQLAVGQCPRSCIHYVTPSQRIVLEEL 215

Query: 425 IASILNVPFDCSAEADLLYSLIIKAKFENNRYRKPKKQPNVSTQH 291
           + SIL+ P+D SAEADLLYSLI+KA+FENNRY+KPK QP  STQH
Sbjct: 216 LDSILDTPYDTSAEADLLYSLIVKARFENNRYQKPKNQPKGSTQH 260


>ref|XP_004156421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At1g68930-like [Cucumis sativus]
          Length = 833

 Score =  296 bits (757), Expect = 1e-77
 Identities = 149/245 (60%), Positives = 183/245 (74%)
 Frame = -1

Query: 1013 SSFQWRVRSTIEYPHRFSSNTNKQFRVNSVRDSSGDQTTMSTSSAYQVLDVMPDCTLSDL 834
            S+F    +S+I +P   SS+T++   +   R    D       +AY++L + P C+ S+L
Sbjct: 593  SNFPSISKSSILFP---SSSTSRFTPICRQRTEGEDTLLSGPMAAYRLLGLDPTCSESEL 649

Query: 833  KAAFRAKVKQFHPDVRKSDDDSSDTMIRRVIQAYXXXXXXXXXXXXXXECLDPFDAPECV 654
            KAAFRAKVKQFHPDV ++ +DS D+MIRRVIQAY              ECLDPF+ PEC 
Sbjct: 650  KAAFRAKVKQFHPDVNRNGNDS-DSMIRRVIQAYEMLSSYSRTEFIERECLDPFENPECE 708

Query: 653  AFDIFVNEVLCVGKGCPYSCVKTAPHAFTFSSATGTAYATSQGHGEDYQVQLAVGQCPRS 474
            AFD+FVNE LCVGKGCPYSCV  APH FTF+S+TGTA A SQGH EDYQ+Q+AVGQCPRS
Sbjct: 709  AFDVFVNEFLCVGKGCPYSCVDRAPHVFTFASSTGTARAMSQGHSEDYQLQMAVGQCPRS 768

Query: 473  CIHYVTPSQRVILEELIASILNVPFDCSAEADLLYSLIIKAKFENNRYRKPKKQPNVSTQ 294
            CIHYVTP QR+ILEEL+ S L+VP+D SAEADLLYSLI+K+KFENNRY+KPK++P  ST+
Sbjct: 769  CIHYVTPLQRIILEELLDSALDVPYDNSAEADLLYSLIVKSKFENNRYKKPKREPKNSTE 828

Query: 293  HVDWY 279
             VDWY
Sbjct: 829  QVDWY 833


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