BLASTX nr result

ID: Atractylodes22_contig00012853 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00012853
         (1321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323210.1| predicted protein [Populus trichocarpa] gi|2...   296   8e-78
ref|XP_002308856.1| predicted protein [Populus trichocarpa] gi|2...   294   4e-77
ref|XP_002266870.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   283   9e-74
ref|XP_004136656.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   278   2e-72
ref|XP_003518992.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   272   2e-70

>ref|XP_002323210.1| predicted protein [Populus trichocarpa] gi|222867840|gb|EEF04971.1|
            predicted protein [Populus trichocarpa]
          Length = 308

 Score =  296 bits (758), Expect = 8e-78
 Identities = 154/287 (53%), Positives = 183/287 (63%), Gaps = 9/287 (3%)
 Frame = +2

Query: 224  MSSGSNTHWCYQCQQPVRLRGHNPVCPHCSGGFVQELSEVVEAGQQDLGPTHAHEPSDYG 403
            MSS  NTHWCY C++PVRLRG +  CP+CSGGFVQEL ++           H   P D+ 
Sbjct: 1    MSSSRNTHWCYSCRRPVRLRGRDSACPYCSGGFVQELDDM-----------HRISPLDFF 49

Query: 404  FMEPFPDPRNR--IMDAFAELIRQRMAGRNPNFDVRRRSGLVPEH--GVVPWFIFDGQAP 571
             M+   D   R  +M+AF++ +RQRMA R+ N D+R RS  VP H  G  P  IF GQ P
Sbjct: 50   GMDSDDDRDQRFGLMEAFSDFMRQRMADRSHNHDIRSRSDSVPGHNPGFGPLLIFGGQVP 109

Query: 572  ARMSANDRFEFFFNGAPPGP-RRSNVSNIFMGPGLQELIEQLTVNDSRQGPPPATRSAID 748
             R+S N  FE  F+GAP     R N  + F+GPGL+EL EQL+ ND R GPPPATRS+ID
Sbjct: 110  FRLSGNGGFEALFSGAPGVAFARGNAGDYFIGPGLEELFEQLSANDQR-GPPPATRSSID 168

Query: 749  SMPTIRITNRHLNTDSHCPVCKDKFELGSEARQMPCNHIYHSGCIEPWLVQHNSCPVCRL 928
            +MPTI+IT +HL +DSHCPVCKDKFELGSEARQMPC+H+YHS CI PWLVQHNSCPVCR 
Sbjct: 169  AMPTIKITQKHLRSDSHCPVCKDKFELGSEARQMPCDHLYHSDCIVPWLVQHNSCPVCRQ 228

Query: 929  ELPAQ----XXXXXXXXXXXXXXXXXXXXXXXXXXXNPLSFLWPFRS 1057
            ELP Q                               NPLS+LWPFRS
Sbjct: 229  ELPPQGSSSRHSYQSSSSRSRSSNYSGRENSRGGRRNPLSYLWPFRS 275


>ref|XP_002308856.1| predicted protein [Populus trichocarpa] gi|222854832|gb|EEE92379.1|
            predicted protein [Populus trichocarpa]
          Length = 311

 Score =  294 bits (752), Expect = 4e-77
 Identities = 152/289 (52%), Positives = 184/289 (63%), Gaps = 9/289 (3%)
 Frame = +2

Query: 218  RAMSSGSNTHWCYQCQQPVRLRGHNPVCPHCSGGFVQELSEVVEAGQQDLGPTHAHEPSD 397
            + MSS  NTHWCY C++PVRLRG +  CP+CSGGFVQEL ++           H   P D
Sbjct: 2    KRMSSSRNTHWCYSCRRPVRLRGRDAACPYCSGGFVQELDDM-----------HRINPLD 50

Query: 398  YGFMEPFPDPRNR--IMDAFAELIRQRMAGRNPNFDVRRRSGLVPEH--GVVPWFIFDGQ 565
            +  M+   D  N   +M+AF+  +RQRMA R+ N D+R RS  +PEH  G  P  IF GQ
Sbjct: 51   FFGMDGDDDHDNMFGLMEAFSAFMRQRMADRSHNHDIRSRSDSIPEHNPGFGPLLIFGGQ 110

Query: 566  APARMSANDRFEFFFNGAPPGP-RRSNVSNIFMGPGLQELIEQLTVNDSRQGPPPATRSA 742
             P R+S N   E  F+G+P     R N  + F+GPGL+EL EQL+ ND R+GPPPATRS+
Sbjct: 111  IPFRLSGNGGLEALFSGSPGVAFARGNAGDYFVGPGLEELFEQLSAND-RRGPPPATRSS 169

Query: 743  IDSMPTIRITNRHLNTDSHCPVCKDKFELGSEARQMPCNHIYHSGCIEPWLVQHNSCPVC 922
            ID+MPTI+IT +HL +DSHCPVCKDKFELGSEARQMPC+H+YHS CI PWLVQHNSCPVC
Sbjct: 170  IDAMPTIKITQKHLRSDSHCPVCKDKFELGSEARQMPCDHLYHSDCIVPWLVQHNSCPVC 229

Query: 923  RLELPAQ----XXXXXXXXXXXXXXXXXXXXXXXXXXXNPLSFLWPFRS 1057
            R ELP Q                               NPLS+LWPFRS
Sbjct: 230  RQELPPQGSNSGHSYQSSSSRSRSSNYSGRENSREGRRNPLSYLWPFRS 278


>ref|XP_002266870.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1 [Vitis
           vinifera]
          Length = 336

 Score =  283 bits (723), Expect = 9e-74
 Identities = 147/257 (57%), Positives = 177/257 (68%), Gaps = 17/257 (6%)
 Frame = +2

Query: 224 MSSGSNTHWCYQCQQPVRLRGHNPVCPHCSGGFVQELSE----VVEA--GQQDLGPTHAH 385
           MS+G NTHWCYQC++ VRL+G + VC +C GGF+QEL++    V EA  G Q+    H  
Sbjct: 1   MSTGGNTHWCYQCRRRVRLQGRDTVCSYCYGGFIQELNDLEGLVPEAFLGSQNSEDNHGQ 60

Query: 386 EPSDYGFMEPF-----PDPRNRIMDAFAELIRQRMAGRNPNFDVRRRSGLVPEHGVV--- 541
             S +            D R  +++A  + +RQRMAGRNPNFDVR RSGLVPE   +   
Sbjct: 61  MSSIFDAFNGLVRQGNADQRFGLVNAVNDFMRQRMAGRNPNFDVRVRSGLVPEDNSMSGY 120

Query: 542 ---PWFIFDGQAPARMSANDRFEFFFNGAPPGPRRSNVSNIFMGPGLQELIEQLTVNDSR 712
              PW +F GQ P         E  F+G     R  NV ++F+GPGL+ELIEQLT+ND R
Sbjct: 121 RSGPWLVFHGQIPV--------EALFSGGTG--RGGNVGDLFLGPGLEELIEQLTMND-R 169

Query: 713 QGPPPATRSAIDSMPTIRITNRHLNTDSHCPVCKDKFELGSEARQMPCNHIYHSGCIEPW 892
           +GPPPATRS+ID+MPTI+IT RHL +DSHCPVCKDKFELGSEARQMPC+HIYHS CI PW
Sbjct: 170 RGPPPATRSSIDAMPTIKITQRHLRSDSHCPVCKDKFELGSEARQMPCDHIYHSDCIVPW 229

Query: 893 LVQHNSCPVCRLELPAQ 943
           LVQHNSCPVCR ELP Q
Sbjct: 230 LVQHNSCPVCRQELPPQ 246


>ref|XP_004136656.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
            gi|449529445|ref|XP_004171710.1| PREDICTED: E3
            ubiquitin-protein ligase RING1-like [Cucumis sativus]
          Length = 305

 Score =  278 bits (712), Expect = 2e-72
 Identities = 141/283 (49%), Positives = 180/283 (63%), Gaps = 7/283 (2%)
 Frame = +2

Query: 230  SGSNTHWCYQCQQPVRLRGHNPVCPHCSGGFVQELSEVVEAGQQDLGPTHAHEPSDYGFM 409
            S +NTHWCY+C+QPVRLRG +  C  C+GGFVQEL E++E    DL     +E       
Sbjct: 2    STANTHWCYRCEQPVRLRGRDMTCLSCNGGFVQELDEMMERSPLDLFGASGNE------- 54

Query: 410  EPFPDPRNRIMDAFAELIRQRMAGRNPNFDVRRRSGLVPEHG--VVPWFIFDGQAPARMS 583
              + + R  +++ F+  +RQR+  RN   D+R R   +P+HG    PW IF GQ P R+S
Sbjct: 55   --YQNRRLGLLELFSNFMRQRLVDRN---DIRGRLDSIPDHGPGFGPWLIFGGQIPVRLS 109

Query: 584  ANDRFEFFFNGAPP-GPRRSNVSNIFMGPGLQELIEQLTVNDSRQGPPPATRSAIDSMPT 760
             +  FE FFNG P  G  RSN  + F+GPGL+EL EQL+ ND R+GPPPA+RS+ID+MP 
Sbjct: 110  GHGGFEAFFNGVPGIGVSRSNGGDYFIGPGLEELFEQLSAND-RRGPPPASRSSIDAMPV 168

Query: 761  IRITNRHLNTDSHCPVCKDKFELGSEARQMPCNHIYHSGCIEPWLVQHNSCPVCRLELPA 940
            ++IT RH+ ++SHCPVC+DKFELGSEARQMPC+H+YHS CI PWLVQHNSCPVCR ELPA
Sbjct: 169  VKITQRHIRSNSHCPVCQDKFELGSEARQMPCDHMYHSDCIVPWLVQHNSCPVCRQELPA 228

Query: 941  Q----XXXXXXXXXXXXXXXXXXXXXXXXXXXNPLSFLWPFRS 1057
            Q                               NP + LWPFR+
Sbjct: 229  QGSGSSHSSSGSNNSSRNSRDRENGRTTQGRRNPFTSLWPFRA 271


>ref|XP_003518992.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
          Length = 309

 Score =  272 bits (695), Expect = 2e-70
 Identities = 142/283 (50%), Positives = 174/283 (61%), Gaps = 5/283 (1%)
 Frame = +2

Query: 224  MSSGSNTHWCYQCQQPVRLRGHNPVCPHCSGGFVQELSEVVEAGQQDLGPTHAHEPSDYG 403
            MS+  NTHWCY C++PV L   + VCP C+ GFV EL+++V     DL     +E  D  
Sbjct: 1    MSNSRNTHWCYSCRRPVWLGRRDAVCPSCNEGFVHELNDMVHVNPFDLFEMDNNEERDQ- 59

Query: 404  FMEPFPDPRNRIMDAFAELIRQRMAGRNPNFDVRRRSGLVPEH--GVVPWFIFDGQAPAR 577
                    R  +M+ F+  +R +MA R  + D+R ++   PEH  G  P  IF GQ P R
Sbjct: 60   --------RLGLMETFSAFMRHQMADRGRSHDIRAQTDSNPEHSAGFAPLLIFGGQIPFR 111

Query: 578  MSANDRFEFFFNGAPP-GPRRSNVSNIFMGPGLQELIEQLTVNDSRQGPPPATRSAIDSM 754
            +S +  FE  FNGAP  G  R N  + F+GPGL+EL EQL+ N+ RQGPPPA+RS+ID+M
Sbjct: 112  LSGHGGFEALFNGAPGIGLTRGNTGDYFIGPGLEELFEQLSANN-RQGPPPASRSSIDAM 170

Query: 755  PTIRITNRHLNTDSHCPVCKDKFELGSEARQMPCNHIYHSGCIEPWLVQHNSCPVCRLEL 934
            PTI+IT RHL +DSHCPVCKDKFE+GSEARQMPCNH+YHS CI PWLVQHNSCPVCR EL
Sbjct: 171  PTIKITQRHLRSDSHCPVCKDKFEVGSEARQMPCNHLYHSDCIVPWLVQHNSCPVCRQEL 230

Query: 935  PAQ--XXXXXXXXXXXXXXXXXXXXXXXXXXXNPLSFLWPFRS 1057
              Q                             NP SFLWPFRS
Sbjct: 231  LPQGLSSSNRSTNGRSRSASLSSSGRESHGRRNPFSFLWPFRS 273


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