BLASTX nr result

ID: Atractylodes22_contig00012784 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00012784
         (446 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19627.3| unnamed protein product [Vitis vinifera]               59   3e-07
ref|XP_002281901.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...    59   3e-07
ref|XP_003550361.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...    59   5e-07
emb|CAN79162.1| hypothetical protein VITISV_019244 [Vitis vinifera]    59   5e-07
ref|XP_002510330.1| ubiquitin-protein ligase, putative [Ricinus ...    56   4e-06

>emb|CBI19627.3| unnamed protein product [Vitis vinifera]
          Length = 346

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 30/75 (40%), Positives = 46/75 (61%)
 Frame = -3

Query: 441 DHTFNQLETVEIKTFGGSRPEFLFIKLLLAHSPSLQKMTIEPSGTSDVHKRLDIAKDVMR 262
           +++F  L  V++    G  P+  FI  LLA+SP L+KMT++P+         ++ KD++R
Sbjct: 275 NYSFAHLRVVKLTGISGVGPQLDFINFLLAYSPVLEKMTVKPASGDGA---WELIKDLLR 331

Query: 261 FSRVSPEAEMIYLDP 217
           F R S  AE+IYLDP
Sbjct: 332 FRRASVRAEIIYLDP 346


>ref|XP_002281901.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Vitis
           vinifera]
          Length = 416

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 30/75 (40%), Positives = 46/75 (61%)
 Frame = -3

Query: 441 DHTFNQLETVEIKTFGGSRPEFLFIKLLLAHSPSLQKMTIEPSGTSDVHKRLDIAKDVMR 262
           +++F  L  V++    G  P+  FI  LLA+SP L+KMT++P+         ++ KD++R
Sbjct: 345 NYSFAHLRVVKLTGISGVGPQLDFINFLLAYSPVLEKMTVKPASGDGA---WELIKDLLR 401

Query: 261 FSRVSPEAEMIYLDP 217
           F R S  AE+IYLDP
Sbjct: 402 FRRASVRAEIIYLDP 416


>ref|XP_003550361.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Glycine
           max]
          Length = 427

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 30/70 (42%), Positives = 45/70 (64%)
 Frame = -3

Query: 426 QLETVEIKTFGGSRPEFLFIKLLLAHSPSLQKMTIEPSGTSDVHKRLDIAKDVMRFSRVS 247
           QL  V+I    G +PE  FI  LL HSP L++MT++P      +  L++ K+++RF R S
Sbjct: 361 QLRYVKIDGISGIKPELDFINFLLLHSPVLERMTVKPV----ANVGLELMKELLRFRRAS 416

Query: 246 PEAEMIYLDP 217
            +AE+IYL+P
Sbjct: 417 GQAEIIYLEP 426


>emb|CAN79162.1| hypothetical protein VITISV_019244 [Vitis vinifera]
          Length = 416

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 30/75 (40%), Positives = 45/75 (60%)
 Frame = -3

Query: 441 DHTFNQLETVEIKTFGGSRPEFLFIKLLLAHSPSLQKMTIEPSGTSDVHKRLDIAKDVMR 262
           ++ F  L  V++    G  P+  FI  LLA+SP L+KMT++P+         ++ KD++R
Sbjct: 345 NYXFAHLRVVKLTGISGVGPQLDFINFLLAYSPVLEKMTVKPASGDGA---WELIKDLLR 401

Query: 261 FSRVSPEAEMIYLDP 217
           F R S  AE+IYLDP
Sbjct: 402 FRRASVRAEIIYLDP 416


>ref|XP_002510330.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551031|gb|EEF52517.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 426

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 29/75 (38%), Positives = 46/75 (61%)
 Frame = -3

Query: 441 DHTFNQLETVEIKTFGGSRPEFLFIKLLLAHSPSLQKMTIEPSGTSDVHKRLDIAKDVMR 262
           ++ F QL  V I    G R E  F+  LL++SP L++MT++P+ +       ++ K+++R
Sbjct: 355 NNLFGQLRLVRIVGISGIRCELDFMNFLLSNSPVLERMTVKPASSDG---GWELIKELLR 411

Query: 261 FSRVSPEAEMIYLDP 217
           F R S  AE+IYLDP
Sbjct: 412 FRRASARAEIIYLDP 426


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