BLASTX nr result

ID: Atractylodes22_contig00012745 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00012745
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517473.1| structure-specific recognition protein, puta...   152   3e-35
ref|XP_002282538.1| PREDICTED: FACT complex subunit SSRP1 [Vitis...   150   1e-34
emb|CAN79926.1| hypothetical protein VITISV_042446 [Vitis vinifera]   150   1e-34
sp|Q39601.1|SSRP1_CATRO RecName: Full=FACT complex subunit SSRP1...   149   2e-34
ref|XP_003517023.1| PREDICTED: FACT complex subunit SSRP1-like [...   143   1e-32

>ref|XP_002517473.1| structure-specific recognition protein, putative [Ricinus communis]
           gi|223543484|gb|EEF45015.1| structure-specific
           recognition protein, putative [Ricinus communis]
          Length = 640

 Score =  152 bits (384), Expect = 3e-35
 Identities = 70/80 (87%), Positives = 75/80 (93%)
 Frame = -3

Query: 240 MADGHLFNNISLGGRGGTNPGQLKVHAGGILWKKQGGGKAVQVDKSDILGLTWMKVPRTN 61
           M DGHLFNNISLGGRGGTNPGQLK+H+GGILWKKQGGGKAV+VDK+DI GLTWMKVPRTN
Sbjct: 1   MTDGHLFNNISLGGRGGTNPGQLKLHSGGILWKKQGGGKAVEVDKADIAGLTWMKVPRTN 60

Query: 60  QLAVKNKDGLKYKFTGFRDQ 1
           QL V+ KDGL YKFTGFRDQ
Sbjct: 61  QLGVRIKDGLFYKFTGFRDQ 80


>ref|XP_002282538.1| PREDICTED: FACT complex subunit SSRP1 [Vitis vinifera]
           gi|296082859|emb|CBI22160.3| unnamed protein product
           [Vitis vinifera]
          Length = 644

 Score =  150 bits (378), Expect = 1e-34
 Identities = 68/80 (85%), Positives = 76/80 (95%)
 Frame = -3

Query: 240 MADGHLFNNISLGGRGGTNPGQLKVHAGGILWKKQGGGKAVQVDKSDILGLTWMKVPRTN 61
           M++GHLFNNISLGGRGGTNPGQL+VH GGILWKKQGGGKAV+VDKSDI+G+TWMKVPRTN
Sbjct: 1   MSEGHLFNNISLGGRGGTNPGQLRVHPGGILWKKQGGGKAVEVDKSDIVGVTWMKVPRTN 60

Query: 60  QLAVKNKDGLKYKFTGFRDQ 1
           QL V+ KDGL YKFTGFR+Q
Sbjct: 61  QLGVRVKDGLYYKFTGFREQ 80


>emb|CAN79926.1| hypothetical protein VITISV_042446 [Vitis vinifera]
          Length = 644

 Score =  150 bits (378), Expect = 1e-34
 Identities = 68/80 (85%), Positives = 76/80 (95%)
 Frame = -3

Query: 240 MADGHLFNNISLGGRGGTNPGQLKVHAGGILWKKQGGGKAVQVDKSDILGLTWMKVPRTN 61
           M++GHLFNNISLGGRGGTNPGQL+VH GGILWKKQGGGKAV+VDKSDI+G+TWMKVPRTN
Sbjct: 1   MSEGHLFNNISLGGRGGTNPGQLRVHPGGILWKKQGGGKAVEVDKSDIVGVTWMKVPRTN 60

Query: 60  QLAVKNKDGLKYKFTGFRDQ 1
           QL V+ KDGL YKFTGFR+Q
Sbjct: 61  QLGVRVKDGLYYKFTGFREQ 80


>sp|Q39601.1|SSRP1_CATRO RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates
           chromatin transcription complex subunit SSRP1; AltName:
           Full=Recombination signal sequence recognition protein 1
           gi|433872|emb|CAA82251.1| HMG protein [Catharanthus
           roseus]
          Length = 639

 Score =  149 bits (377), Expect = 2e-34
 Identities = 68/80 (85%), Positives = 76/80 (95%)
 Frame = -3

Query: 240 MADGHLFNNISLGGRGGTNPGQLKVHAGGILWKKQGGGKAVQVDKSDILGLTWMKVPRTN 61
           MADGHLFNNI+LGGRGGTNPGQL+VH+GGILWKKQGG KAV+VDKSD++GLTWMKVPR+N
Sbjct: 1   MADGHLFNNITLGGRGGTNPGQLRVHSGGILWKKQGGAKAVEVDKSDMVGLTWMKVPRSN 60

Query: 60  QLAVKNKDGLKYKFTGFRDQ 1
           QL V+ KDGL YKFTGFRDQ
Sbjct: 61  QLGVRIKDGLFYKFTGFRDQ 80


>ref|XP_003517023.1| PREDICTED: FACT complex subunit SSRP1-like [Glycine max]
          Length = 640

 Score =  143 bits (361), Expect = 1e-32
 Identities = 62/80 (77%), Positives = 74/80 (92%)
 Frame = -3

Query: 240 MADGHLFNNISLGGRGGTNPGQLKVHAGGILWKKQGGGKAVQVDKSDILGLTWMKVPRTN 61
           M DGHLFNNI+LGGRGGTNPGQ+K++ GGI+WK+QGGGK ++VDKSDI+G+TWMKVPR+N
Sbjct: 1   MTDGHLFNNITLGGRGGTNPGQIKIYPGGIIWKRQGGGKLIEVDKSDIMGVTWMKVPRSN 60

Query: 60  QLAVKNKDGLKYKFTGFRDQ 1
           QL V+ KDGL YKFTGFRDQ
Sbjct: 61  QLGVQIKDGLYYKFTGFRDQ 80


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