BLASTX nr result

ID: Atractylodes22_contig00012734 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00012734
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21840.3| unnamed protein product [Vitis vinifera]              107   8e-22
ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containi...   107   8e-22
emb|CAN73453.1| hypothetical protein VITISV_024964 [Vitis vinifera]   105   5e-21
gb|AFK47046.1| unknown [Lotus japonicus]                              102   3e-20
ref|XP_002517926.1| pentatricopeptide repeat-containing protein,...    92   6e-17

>emb|CBI21840.3| unnamed protein product [Vitis vinifera]
          Length = 446

 Score =  107 bits (268), Expect = 8e-22
 Identities = 49/97 (50%), Positives = 73/97 (75%)
 Frame = -3

Query: 341 YCKKGLLEKAETLVKKLIESGKDPNASTWSRMALGYVKNDRMEEAVEAMRKSILGSLSGW 162
           YCKKGLLEKAE LV + IE G++P A TW  +A GY +N++ME+AV+ ++K++L +  GW
Sbjct: 303 YCKKGLLEKAEQLVSRAIEQGEEPIAVTWDALAAGYHENNQMEKAVDTLKKALLATSQGW 362

Query: 161 TVDTASLSACLDFLNRKGRLDEAEEMIKLLREKGHLS 51
             +  +LSACL++L  KG ++EAE +I+LLRE+  +S
Sbjct: 363 KPNPVTLSACLEYLKGKGDVEEAENLIRLLREQSLVS 399


>ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial [Vitis vinifera]
          Length = 499

 Score =  107 bits (268), Expect = 8e-22
 Identities = 49/97 (50%), Positives = 73/97 (75%)
 Frame = -3

Query: 341 YCKKGLLEKAETLVKKLIESGKDPNASTWSRMALGYVKNDRMEEAVEAMRKSILGSLSGW 162
           YCKKGLLEKAE LV + IE G++P A TW  +A GY +N++ME+AV+ ++K++L +  GW
Sbjct: 356 YCKKGLLEKAEQLVSRAIEQGEEPIAVTWDALAAGYHENNQMEKAVDTLKKALLATSQGW 415

Query: 161 TVDTASLSACLDFLNRKGRLDEAEEMIKLLREKGHLS 51
             +  +LSACL++L  KG ++EAE +I+LLRE+  +S
Sbjct: 416 KPNPVTLSACLEYLKGKGDVEEAENLIRLLREQSLVS 452


>emb|CAN73453.1| hypothetical protein VITISV_024964 [Vitis vinifera]
          Length = 499

 Score =  105 bits (261), Expect = 5e-21
 Identities = 48/97 (49%), Positives = 72/97 (74%)
 Frame = -3

Query: 341 YCKKGLLEKAETLVKKLIESGKDPNASTWSRMALGYVKNDRMEEAVEAMRKSILGSLSGW 162
           YCKKGLLEKAE LV + IE G++P A TW  +A GY +N++ME+AV+ ++K++L +  GW
Sbjct: 356 YCKKGLLEKAEQLVSRAIEQGEEPIAVTWDALAAGYHENNQMEKAVDTLKKALLATSQGW 415

Query: 161 TVDTASLSACLDFLNRKGRLDEAEEMIKLLREKGHLS 51
             +  +LSACL++L  K  ++EAE +I+LLRE+  +S
Sbjct: 416 KPNPVTLSACLEYLKGKXDVEEAENLIRLLREQSLVS 452


>gb|AFK47046.1| unknown [Lotus japonicus]
          Length = 496

 Score =  102 bits (254), Expect = 3e-20
 Identities = 47/105 (44%), Positives = 72/105 (68%)
 Frame = -3

Query: 341 YCKKGLLEKAETLVKKLIESGKDPNASTWSRMALGYVKNDRMEEAVEAMRKSILGSLSGW 162
           YCK+GLL+KAE  ++KL++SGK  + S+W RMA GY  ++ ME+AV+ M+K+IL +  GW
Sbjct: 355 YCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGYHMDNDMEKAVQTMKKAILANRPGW 414

Query: 161 TVDTASLSACLDFLNRKGRLDEAEEMIKLLREKGHLSKAVYMGIV 27
               ++L AC+ +L  K  L+ A E++KL +E GH+    Y G+V
Sbjct: 415 RPSPSTLVACITYLKEKLDLESALEILKLCKEDGHIKITTYDGLV 459


>ref|XP_002517926.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542908|gb|EEF44444.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 504

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 43/102 (42%), Positives = 67/102 (65%)
 Frame = -3

Query: 344 VYCKKGLLEKAETLVKKLIESGKDPNASTWSRMALGYVKNDRMEEAVEAMRKSILGSLSG 165
           VY +KG LEKAET + K++ SG++P+A++W+ +A GY  + +M +AVE +RK+I  S  G
Sbjct: 360 VYSRKGHLEKAETYINKIVASGEEPDATSWNHLAAGYHSSGQMTKAVETIRKAISVSKPG 419

Query: 164 WTVDTASLSACLDFLNRKGRLDEAEEMIKLLREKGHLSKAVY 39
           W     +LSACL+FL  +G  +  EE++K+ +E    S   Y
Sbjct: 420 WKPSLLTLSACLEFLKGQGDAETLEELLKIAKEHCCFSAGAY 461


Top