BLASTX nr result

ID: Atractylodes22_contig00012678 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00012678
         (1273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   203   9e-50
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                   185   2e-44
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                   176   9e-42
emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]   129   2e-27
ref|XP_002532644.1| conserved hypothetical protein [Ricinus comm...   128   4e-27

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  203 bits (516), Expect = 9e-50
 Identities = 124/306 (40%), Positives = 164/306 (53%), Gaps = 31/306 (10%)
 Frame = +1

Query: 448  PTQAQRLDQLEGQFAIIQSSITXXXXXXXXXXXXXMQKSLATQIAASLEQITKKFGEDLN 627
            PT  QRLD LE Q A +Q+SI               + ++A QI+  +E+  KK  EDL+
Sbjct: 4    PTTNQRLDLLEAQMANLQNSIAAQISDSVGLAMEAAKITIADQISQRMEEAMKKSKEDLD 63

Query: 628  TMSTRLEGRINRSREYQESLIAKVKDDQ-----------LKLQSEIQ*TNGR--VAPF-- 762
              + RLEGRI R+RE  E ++   + DQ            KLQ E +    R  V+P   
Sbjct: 64   VANFRLEGRIERTRENLEGMLTVARADQNKFQTEVSSALAKLQPEKEKNGNRKEVSPHTV 123

Query: 763  -----GKETLN----------DDVFTVYAPGKFXXXXXXXXXXXXXXXXXXXXXWRFRKL 897
                 G+E L           ++VF     G                       WR +KL
Sbjct: 124  DLELEGREGLRGERAMDRRGENEVFDGGGIG------GGRGEAWSRGHSGPGGNWRHKKL 177

Query: 898  DMPIFDGSNPDGWILRAERYFQFYKLNE-EKMEAAVARMEGDALLWFQWEHRRRSISRWE 1074
            DMP FD ++PDGWILR ER+F FY L + EKMEAAV  MEGDAL W+QWE++RR    WE
Sbjct: 178  DMPAFDDTDPDGWILRGERFFAFYGLTDAEKMEAAVVAMEGDALRWYQWENKRRPFRNWE 237

Query: 1075 ELKSLMLKRFRPTHSGSLHEQWLTLKQMGTVEEYQRSFIELMAPLTNVPEDIALGNFING 1254
             +KS +L +FRP + GSLHEQWL+  Q  +V EY+R F+E  APL  +PE+I +G FI+G
Sbjct: 238  SMKSFVLTQFRPLNVGSLHEQWLSTTQTASVWEYRRKFVETAAPLDGIPEEILMGKFIHG 297

Query: 1255 LKGEIQ 1272
            L  E+Q
Sbjct: 298  LNPELQ 303


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score =  185 bits (469), Expect = 2e-44
 Identities = 103/241 (42%), Positives = 140/241 (58%), Gaps = 1/241 (0%)
 Frame = +1

Query: 553  MQKSLATQIAASLEQITKKFGEDLNTMSTRLEGRINRSREYQESLIAKVKDDQLKLQSEI 732
            MQ++LATQIA SLE+ TKK GED+  ++ R++      RE  E                 
Sbjct: 1    MQQTLATQIADSLEKTTKKIGEDMAKLAERIDSSAESRREASE----------------- 43

Query: 733  Q*TNGRVAPFGKETLNDDVFTVYAPGKFXXXXXXXXXXXXXXXXXXXXXWRFRKLDMPIF 912
                 R +P  +    +    V   G                       W+ ++LD+PIF
Sbjct: 44   -----RGSPDERRDWEEREGFVRGDGD-----------GYEGGFRGGGGWKAKRLDLPIF 87

Query: 913  DGSNPDGWILRAERYFQFYKLN-EEKMEAAVARMEGDALLWFQWEHRRRSISRWEELKSL 1089
             G+NPDGWILR ERYF FY+L  EE++EAAV  ++G+ALLWFQWEHR R I+ W E+K++
Sbjct: 88   TGTNPDGWILRTERYFGFYRLAAEEQLEAAVVALDGEALLWFQWEHRHRPITGWPEMKAM 147

Query: 1090 MLKRFRPTHSGSLHEQWLTLKQMGTVEEYQRSFIELMAPLTNVPEDIALGNFINGLKGEI 1269
            +L++FR T  GSL EQW+   Q G+V+EY+  FIELMAPL N+PE+IA   FI+ LK EI
Sbjct: 148  LLRQFRDTALGSLQEQWMNHHQEGSVKEYKSRFIELMAPLDNIPENIAQAQFISKLKEEI 207

Query: 1270 Q 1272
            +
Sbjct: 208  K 208


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score =  176 bits (447), Expect = 9e-42
 Identities = 105/279 (37%), Positives = 151/279 (54%), Gaps = 1/279 (0%)
 Frame = +1

Query: 439  IMAPTQAQRLDQLEGQFAIIQSSITXXXXXXXXXXXXXMQKSLATQIAASLEQITKKFGE 618
            ++ P+  QRLDQLE   A +++S++             +Q++LATQIA S          
Sbjct: 1    MVVPSNTQRLDQLEQGIADLRASLSGEVASAVGKAVETLQETLATQIAVS---------- 50

Query: 619  DLNTMSTRLEGRINRSREYQESLIAKVKDDQLKLQSEIQ*TNGRVAPFGKETLNDDVFTV 798
                        + R+ +     +AK+++   + + E                NDD    
Sbjct: 51   ------------LERATQQLREEVAKIQERGDERRDE-------------RRENDDGEGE 85

Query: 799  YAPGKFXXXXXXXXXXXXXXXXXXXXXWRFRKLDMPIFDGSNPDGWILRAERYFQFYKLN 978
               G F                     WR +KLD+P+F G+NPDGWI+RAER+FQFY+L 
Sbjct: 86   GFGGGFRGGGS----------------WRAKKLDLPVFSGNNPDGWIIRAERFFQFYRLT 129

Query: 979  E-EKMEAAVARMEGDALLWFQWEHRRRSISRWEELKSLMLKRFRPTHSGSLHEQWLTLKQ 1155
            E EK+EAAV  ++G+ALLW+QWE+RRR I RW E++ ++L+RFR T  GSL EQWL+ +Q
Sbjct: 130  EDEKVEAAVVSLDGEALLWYQWENRRRPIHRWSEMRWMLLRRFRETALGSLQEQWLSHEQ 189

Query: 1156 MGTVEEYQRSFIELMAPLTNVPEDIALGNFINGLKGEIQ 1272
               V EY+R FIEL+APL  +PE IA   F++ LK EI+
Sbjct: 190  EEGVVEYRRKFIELLAPLEGIPESIAQAQFVSKLKEEIK 228


>emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
          Length = 2232

 Score =  129 bits (323), Expect = 2e-27
 Identities = 65/133 (48%), Positives = 83/133 (62%), Gaps = 2/133 (1%)
 Frame = +1

Query: 880  WR-FRKLDMPIFDGSNPDGWILRAERYFQFYKLNEE-KMEAAVARMEGDALLWFQWEHRR 1053
            WR  R+++MP+F G NPDGWI RA+RYF  Y L EE K+ AA   ++GDAL W+QW   R
Sbjct: 767  WRGSRRVEMPVFTGENPDGWIFRADRYFATYGLTEEEKLVAAAMSLDGDALSWYQWTDSR 826

Query: 1054 RSISRWEELKSLMLKRFRPTHSGSLHEQWLTLKQMGTVEEYQRSFIELMAPLTNVPEDIA 1233
                 WE LK  +L RFR T  GSL EQ+L ++Q GTV  Y R F  L  PL  + E++ 
Sbjct: 827  EVFGSWENLKRRLLLRFRLTQEGSLCEQFLAVRQQGTVAAYWREFEILETPLKGISEEVM 886

Query: 1234 LGNFINGLKGEIQ 1272
               F+NGL  EI+
Sbjct: 887  ESTFMNGLLPEIR 899


>ref|XP_002532644.1| conserved hypothetical protein [Ricinus communis]
            gi|223527635|gb|EEF29747.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 462

 Score =  128 bits (321), Expect = 4e-27
 Identities = 60/129 (46%), Positives = 84/129 (65%), Gaps = 1/129 (0%)
 Frame = +1

Query: 889  RKLDMPIFDGSNPDGWILRAERYFQFYKLNE-EKMEAAVARMEGDALLWFQWEHRRRSIS 1065
            RKL +P+F+G NPDGWI RAERYF    +   ++++AA   +EGDAL WFQWE  RR   
Sbjct: 106  RKLKLPVFEGENPDGWIFRAERYFDINNIPVVDRLKAASVCLEGDALAWFQWEEGRRPFR 165

Query: 1066 RWEELKSLMLKRFRPTHSGSLHEQWLTLKQMGTVEEYQRSFIELMAPLTNVPEDIALGNF 1245
             W + K  ++  FR T  G+LH+Q L LKQ  TV+E++R F  + APL  + ED+    F
Sbjct: 166  SWVDFKESLIVCFRSTQEGTLHDQLLALKQTTTVKEFRRQFEIIAAPLKGLAEDVLEAAF 225

Query: 1246 INGLKGEIQ 1272
            +NGL+ ++Q
Sbjct: 226  VNGLRPDMQ 234


Top