BLASTX nr result

ID: Atractylodes22_contig00012656 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00012656
         (840 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27434.3| unnamed protein product [Vitis vinifera]               84   5e-27
ref|XP_002315980.1| predicted protein [Populus trichocarpa] gi|2...    78   2e-26
ref|XP_002514537.1| ubiquitin-protein ligase, putative [Ricinus ...    80   7e-26
ref|XP_003589313.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    81   7e-26
ref|XP_003589307.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    77   2e-25

>emb|CBI27434.3| unnamed protein product [Vitis vinifera]
          Length = 452

 Score = 84.0 bits (206), Expect(2) = 5e-27
 Identities = 45/110 (40%), Positives = 69/110 (62%), Gaps = 2/110 (1%)
 Frame = -1

Query: 507 HKGPISKFSLHIPNMYLDSFQEIDQWMLFLSRNNVRELVLTNSN-RRYALPSYVFSCLEL 331
           HKGPI KF L +    L+S+ +ID W+ FLS ++++E  L+ +    Y LPSY F+ L L
Sbjct: 117 HKGPIVKFVLEVDE--LESYSDIDHWINFLSNHDIQEFTLSRAKTEHYKLPSYFFTFLHL 174

Query: 330 RQLRLATCIFKPPLEFEGFLNLEDLFLQNVEFRANSCGTLV-TLPQLKKL 184
           R L+L  C F+PP  F+GF  L  L L+++   A + G+L+ + P L++L
Sbjct: 175 RHLKLRGCAFRPPPRFKGFSKLISLQLEDILMDAETFGSLISSCPLLEQL 224



 Score = 63.9 bits (154), Expect(2) = 5e-27
 Identities = 31/74 (41%), Positives = 45/74 (60%)
 Frame = -2

Query: 728 DRISNLSEDLINSILERLPVQDVVRASILSKKWRYRWTTMRALVFDDQFSKKFAKNGAFG 549
           D IS+L  ++I +IL RLP+ D V  SILSKKWRY+W T+  LV D+   KK        
Sbjct: 43  DIISDLPNNIIENILMRLPICDAVGTSILSKKWRYKWLTLPHLVIDNALGKKLLGRQQSA 102

Query: 548 RNGFIRIINQLVML 507
           +N  +  + Q+++L
Sbjct: 103 KNELVSAVYQVLLL 116


>ref|XP_002315980.1| predicted protein [Populus trichocarpa] gi|222865020|gb|EEF02151.1|
           predicted protein [Populus trichocarpa]
          Length = 420

 Score = 77.8 bits (190), Expect(2) = 2e-26
 Identities = 53/156 (33%), Positives = 83/156 (53%), Gaps = 2/156 (1%)
 Frame = -1

Query: 507 HKGPISKFSLHIPNMYLDSFQEIDQWMLFLSRNNVRELVLT-NSNRRYALPSYVFSCLEL 331
           H+GPI KF L     YL    +IDQW+LFLSR++++ELVL       + +PS +F+C +L
Sbjct: 81  HQGPIHKFQLS--TSYLQCCPDIDQWILFLSRSDIKELVLELGEGEWFRVPSCLFNCKKL 138

Query: 330 RQLRLATCIFKPPLEFEGFLNLEDLFLQNVEFRANSCGTLVT-LPQLKKLRLQSCTYVCN 154
             L L  C F PP  F+GFL L  L L  V     +  +L++  P L+ L L   +Y  +
Sbjct: 139 TCLELFRCEFDPPPTFKGFLCLRSLSLHQVLVAPEAIESLISGCPLLESLAL---SYFDS 195

Query: 153 FNIEARALQMLLVIACPDALLLRLLDSPCLVVLGIS 46
             +  RA  +  +    +   + L ++P LV + ++
Sbjct: 196 LALNIRAPNLKYLCLEGEFTDICLENTPLLVAMSVA 231



 Score = 68.2 bits (165), Expect(2) = 2e-26
 Identities = 30/50 (60%), Positives = 39/50 (78%)
 Frame = -2

Query: 734 EEDRISNLSEDLINSILERLPVQDVVRASILSKKWRYRWTTMRALVFDDQ 585
           + D IS+L + ++ SIL RLP++D VR SILS KWRYRWTT+  LVFDD+
Sbjct: 6   DPDLISDLPQSILESILTRLPIRDAVRTSILSSKWRYRWTTLTHLVFDDK 55


>ref|XP_002514537.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223546141|gb|EEF47643.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 421

 Score = 79.7 bits (195), Expect(2) = 7e-26
 Identities = 54/156 (34%), Positives = 84/156 (53%), Gaps = 2/156 (1%)
 Frame = -1

Query: 507 HKGPISKFSLHIPNMYLDSFQEIDQWMLFLSRNNVRELVLT-NSNRRYALPSYVFSCLEL 331
           H GPI KF L     YL    +IDQW+LFLSR++++ELVL       + +PS +F+C +L
Sbjct: 81  HHGPIHKFQLS--TSYLQCCPDIDQWLLFLSRSDIKELVLELGEGEWFRVPSCLFNCKKL 138

Query: 330 RQLRLATCIFKPPLEFEGFLNLEDLFLQNVEFRANSCGTLVT-LPQLKKLRLQSCTYVCN 154
            +L L  C F PP  F+GFL L+ L L  V     +  +L++  P L+ L   S +Y  +
Sbjct: 139 TRLELTRCEFDPPPNFKGFLCLKSLNLYQVLVAPEAIESLISGCPLLESL---SLSYFDS 195

Query: 153 FNIEARALQMLLVIACPDALLLRLLDSPCLVVLGIS 46
             +  RA  +  +    +   + L ++P LV + I+
Sbjct: 196 LVLNVRAPNLKYLCLEGEFKDICLENTPLLVAMSIA 231



 Score = 64.3 bits (155), Expect(2) = 7e-26
 Identities = 31/74 (41%), Positives = 46/74 (62%)
 Frame = -2

Query: 728 DRISNLSEDLINSILERLPVQDVVRASILSKKWRYRWTTMRALVFDDQFSKKFAKNGAFG 549
           D I++L   +I SIL RLP++D V+ SILS KWRYRW T+  LVFDD+    +   G   
Sbjct: 8   DFITDLPSSIIESILTRLPIRDAVKTSILSTKWRYRWATLTHLVFDDKCVAMYCDKGVL- 66

Query: 548 RNGFIRIINQLVML 507
            +  ++ I++ + L
Sbjct: 67  ESRLVKFISRALFL 80


>ref|XP_003589313.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355478361|gb|AES59564.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 293

 Score = 81.3 bits (199), Expect(2) = 7e-26
 Identities = 51/133 (38%), Positives = 72/133 (54%), Gaps = 4/133 (3%)
 Frame = -1

Query: 501 GPISKFSLHIPNMYLDSFQEIDQWMLFLSRNNVRELVLT---NSNRRYALPSYVFSCLEL 331
           GPI KF L   ++      +ID+W L+L+R  V+E VL    N ++RY +PS++FSC  L
Sbjct: 104 GPIKKFKLSRDHI---DVTDIDRWTLYLTRWQVKEFVLEIWKNPDQRYKIPSWLFSCQSL 160

Query: 330 RQLRLATCIFKPPLEFEGFLNLEDLFLQNVEFRANSCGTLV-TLPQLKKLRLQSCTYVCN 154
             L L  C   PP  F+GF NL+ L LQ V    ++   L+ +   L++L L  C    N
Sbjct: 161 HHLELLECWLIPPSTFQGFKNLKSLDLQYVTLTKDAVENLISSCLMLERLILMECDGFKN 220

Query: 153 FNIEARALQMLLV 115
            NI A  LQ  L+
Sbjct: 221 LNIHAPNLQYFLM 233



 Score = 62.8 bits (151), Expect(2) = 7e-26
 Identities = 30/80 (37%), Positives = 52/80 (65%)
 Frame = -2

Query: 746 LASAEEDRISNLSEDLINSILERLPVQDVVRASILSKKWRYRWTTMRALVFDDQFSKKFA 567
           ++  E DR+S+L   +I+ IL  LP+++  R SILS  WRY+WTT+  LVFD++   + +
Sbjct: 22  VSDEEPDRVSSLPGHVIDHILSILPIKEAARTSILSTNWRYKWTTLPNLVFDNECLSETS 81

Query: 566 KNGAFGRNGFIRIINQLVML 507
           K+    ++   RII+ +++L
Sbjct: 82  KDLLVIKSKLSRIIDHVLLL 101


>ref|XP_003589307.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355478355|gb|AES59558.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 660

 Score = 77.0 bits (188), Expect(2) = 2e-25
 Identities = 51/129 (39%), Positives = 68/129 (52%), Gaps = 2/129 (1%)
 Frame = -1

Query: 507 HKGPISKFSLHIPNMYLDSFQEIDQWMLFLSRNNVRELVLTN-SNRRYALPSYVFSCLEL 331
           H GPI KF L   +  L    +ID+W L L+R  V+E VL     +RY +PS +FSC  L
Sbjct: 323 HSGPIKKFKLS--HRELIGVTDIDRWTLHLTRRPVKEFVLEIWKGQRYKIPSCLFSCQGL 380

Query: 330 RQLRLATCIFKPPLEFEGFLNLEDLFLQNVEFRANSCGTLV-TLPQLKKLRLQSCTYVCN 154
             L L  C   PP  F+GF NL+ L LQ+V    ++   L+ T P L++L L +      
Sbjct: 381 HHLELFNCWLIPPSTFQGFRNLKSLDLQHVTLSQDAFENLISTCPLLERLTLMNFDGFNY 440

Query: 153 FNIEARALQ 127
            NI A  LQ
Sbjct: 441 LNIHAPNLQ 449



 Score = 65.5 bits (158), Expect(2) = 2e-25
 Identities = 33/80 (41%), Positives = 51/80 (63%)
 Frame = -2

Query: 746 LASAEEDRISNLSEDLINSILERLPVQDVVRASILSKKWRYRWTTMRALVFDDQFSKKFA 567
           +  AE DRIS+L   +I+ IL  LP+++ VR SILS KWRY+W T+  LVFD Q     +
Sbjct: 243 VTDAEPDRISSLPGHIIDQILSILPIKEAVRTSILSTKWRYKWATLPNLVFDSQCISDTS 302

Query: 566 KNGAFGRNGFIRIINQLVML 507
           ++    ++   RII+ +++L
Sbjct: 303 EDLLVIKSKLSRIIDHVLLL 322


Top