BLASTX nr result

ID: Atractylodes22_contig00012618 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00012618
         (520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]    59   4e-07
ref|XP_003622277.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    55   5e-06
ref|XP_003625380.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    55   8e-06

>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 5/122 (4%)
 Frame = +3

Query: 6   FPNLKHLELKSWYNCGWLLLPHFLESSPKXXXXXXXXXXXXXXTQ--WVEPKSVPSCMLT 179
           F N+  LE        W  LP+FL SSP                   W+ P  VP+C++ 
Sbjct: 331 FHNMTRLEFLFIGGFNWDFLPNFLHSSPNLEALVIETGYTNELIPEGWLMPLQVPACLVL 390

Query: 180 TLKTMELAKCKWHECDFRFLKFMLGNAVVLKTVTVNLDQK---EEMWLCAQLLKFPRASR 350
            LK +E+ +    + +   ++++L NA VL+ +T++  +    +E  +C +LL  PR SR
Sbjct: 391 HLKEIEIRRIVGEDYELEAVEYLLKNAEVLQQMTIDCHESYMDQEFCVCKKLLGLPRGSR 450

Query: 351 YC 356
            C
Sbjct: 451 SC 452


>ref|XP_003622277.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355497292|gb|AES78495.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 356

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
 Frame = +3

Query: 141 WVEPKSVPSCMLTTLKTMELAKCKWHECDFRFLKFMLGNAVVLKTVTVN---LDQKEEMW 311
           W++   VP C  + LKT  L   K   CDF+F K++L NA VL+T+T+N   +D   +  
Sbjct: 277 WMDTPIVPECFSSQLKTCSLIGYKGMNCDFQFAKYILKNAKVLQTMTINASPVDINIKHQ 336

Query: 312 LCAQLLKFPRASRYCEIHF 368
           +  +L   PR S  C+I F
Sbjct: 337 ILIKLTLCPRGSTTCKISF 355


>ref|XP_003625380.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355500395|gb|AES81598.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 391

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 41/132 (31%), Positives = 60/132 (45%), Gaps = 11/132 (8%)
 Frame = +3

Query: 6   FPNLKHLEL----KSWYNCGWLLLPHFLESSPKXXXXXXXXXXXXXXTQ---WVEPKSVP 164
           F +L HLEL    K WY   W  L   L+ SPK                   W +P  VP
Sbjct: 260 FESLIHLELSLNFKIWYP-RWEWLLGMLKHSPKLQNLTIQDNKAIEEAIDECWKDPPIVP 318

Query: 165 SCMLTTLKTMELAKCKWHECDFRFLKFMLGNAVVLKTVTVN----LDQKEEMWLCAQLLK 332
            C+ + LKT  +   K  + D  F K+++ N+ VL+T+T+N    LD   +  L  +L  
Sbjct: 319 ECLSSQLKTCHIRVYKGTKYDLEFTKYIMENSKVLETMTINSTRSLDMNVKYQLLMKLSS 378

Query: 333 FPRASRYCEIHF 368
           + R S  C++ F
Sbjct: 379 YTRGSTTCKLLF 390