BLASTX nr result

ID: Atractylodes22_contig00012617 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00012617
         (445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]    60   2e-07
ref|NP_198127.1| FBD-associated F-box protein [Arabidopsis thali...    56   4e-06
gb|AAM62702.1| unknown [Arabidopsis thaliana]                          56   4e-06
ref|XP_003624289.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    55   6e-06
gb|ABN05919.1| Cyclin-like F-box; FBD [Medicago truncatula]            55   6e-06

>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 40/121 (33%), Positives = 68/121 (56%), Gaps = 9/121 (7%)
 Frame = +3

Query: 6   FPNLKQLELK--SGFTCGWLLLLPHFLESSPELEHLLC----IEERKPEETQWVEPQSVP 167
           F N+ +LE     GF   +L   P+FL SSP LE L+       E  PE   W+ P  VP
Sbjct: 331 FHNMTRLEFLFIGGFNWDFL---PNFLHSSPNLEALVIETGYTNELIPEG--WLMPLQVP 385

Query: 168 SCMLTTLKTMKVAKCEWQECDIRFLEFMLGNAEVLKTVTVNLDQK---EEMWLCAQLLKL 338
           +C++  LK +++ +   ++ ++  +E++L NAEVL+ +T++  +    +E  +C +LL L
Sbjct: 386 ACLVLHLKEIEIRRIVGEDYELEAVEYLLKNAEVLQQMTIDCHESYMDQEFCVCKKLLGL 445

Query: 339 P 341
           P
Sbjct: 446 P 446


>ref|NP_198127.1| FBD-associated F-box protein [Arabidopsis thaliana]
           gi|122242299|sp|Q0V7P8.1|FBD15_ARATH RecName:
           Full=FBD-associated F-box protein At5g27750
           gi|111074512|gb|ABH04629.1| At5g27750 [Arabidopsis
           thaliana] gi|332006338|gb|AED93721.1| FBD-associated
           F-box protein [Arabidopsis thaliana]
          Length = 459

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 36/98 (36%), Positives = 59/98 (60%), Gaps = 2/98 (2%)
 Frame = +3

Query: 3   KFPNLKQLELKSGFTCGWLLLLPHFLESSPELEHLLC-IEERKPEETQWVEPQSVPSCML 179
           KF NL  L  K+ F    L  LP FLES P L++L+  I   K +ET+ +   +VP C++
Sbjct: 330 KFNNLSHL--KAVFPSPLLPFLPAFLESFPNLKNLILKIAFAKDDETEELNLINVPRCIV 387

Query: 180 TTLKTMKVAKC-EWQECDIRFLEFMLGNAEVLKTVTVN 290
           +TL+ +++    EW+E +++   + L NA VLK +T++
Sbjct: 388 STLECVEIKGLFEWEEEEMKIARYFLENAAVLKKLTMS 425


>gb|AAM62702.1| unknown [Arabidopsis thaliana]
          Length = 459

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 36/98 (36%), Positives = 59/98 (60%), Gaps = 2/98 (2%)
 Frame = +3

Query: 3   KFPNLKQLELKSGFTCGWLLLLPHFLESSPELEHLLC-IEERKPEETQWVEPQSVPSCML 179
           KF NL  L  K+ F    L  LP FLES P L++L+  I   K +ET+ +   +VP C++
Sbjct: 330 KFNNLSHL--KAVFPSPLLPFLPAFLESFPNLKNLILKIAFAKDDETEELNLINVPRCIV 387

Query: 180 TTLKTMKVAKC-EWQECDIRFLEFMLGNAEVLKTVTVN 290
           +TL+ +++    EW+E +++   + L NA VLK +T++
Sbjct: 388 STLECVEIKGLFEWEEEEMKIARYFLENAAVLKKLTMS 425


>ref|XP_003624289.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355499304|gb|AES80507.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 256

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 31/105 (29%), Positives = 57/105 (54%), Gaps = 10/105 (9%)
 Frame = +3

Query: 6   FPNLKQLELKSGFT-------CGWLLLLPHFLESSPELEHLLC---IEERKPEETQWVEP 155
           F NL Q+EL S            W+L +   L+ SP+L+HL+    IE     +  W +P
Sbjct: 126 FYNLTQMELFSNLKHKTWPNKWKWMLEV-EMLQHSPKLQHLIIHKEIENGIENKDNWEDP 184

Query: 156 QSVPSCMLTTLKTMKVAKCEWQECDIRFLEFMLGNAEVLKTVTVN 290
           + +P C+ + LKT        + C+++F E+++G+++VL  +T++
Sbjct: 185 KIIPECLSSQLKTCLFKNYRGKMCELQFAEYVMGSSKVLSNMTIH 229


>gb|ABN05919.1| Cyclin-like F-box; FBD [Medicago truncatula]
          Length = 248

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 31/105 (29%), Positives = 57/105 (54%), Gaps = 10/105 (9%)
 Frame = +3

Query: 6   FPNLKQLELKSGFT-------CGWLLLLPHFLESSPELEHLLC---IEERKPEETQWVEP 155
           F NL Q+EL S            W+L +   L+ SP+L+HL+    IE     +  W +P
Sbjct: 118 FYNLTQMELFSNLKHKTWPNKWKWMLEV-EMLQHSPKLQHLIIHKEIENGIENKDNWEDP 176

Query: 156 QSVPSCMLTTLKTMKVAKCEWQECDIRFLEFMLGNAEVLKTVTVN 290
           + +P C+ + LKT        + C+++F E+++G+++VL  +T++
Sbjct: 177 KIIPECLSSQLKTCLFKNYRGKMCELQFAEYVMGSSKVLSNMTIH 221