BLASTX nr result

ID: Atractylodes22_contig00012610 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00012610
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521214.1| PREDICTED: DNA polymerase delta small subuni...   161   5e-38
ref|XP_003625260.1| DNA polymerase delta small subunit [Medicago...   160   8e-38
ref|XP_002279533.1| PREDICTED: DNA polymerase delta small subuni...   159   2e-37
emb|CAN71889.1| hypothetical protein VITISV_040861 [Vitis vinifera]   159   2e-37
ref|XP_003554206.1| PREDICTED: DNA polymerase delta small subuni...   158   4e-37

>ref|XP_003521214.1| PREDICTED: DNA polymerase delta small subunit-like [Glycine max]
          Length = 433

 Score =  161 bits (408), Expect = 5e-38
 Identities = 70/83 (84%), Positives = 80/83 (96%)
 Frame = +2

Query: 2   PTAPNTLGCYPFTDRDPFFIESCPHVYFVGNQDKYATRIVKGSEGQLVRVICIPKFSETG 181
           PTAPNTLGCYP+TD+DPFFIESCPHVYFVGNQDK+ TR++KGSEGQLVR+IC+PKFSETG
Sbjct: 351 PTAPNTLGCYPYTDKDPFFIESCPHVYFVGNQDKFETRVIKGSEGQLVRLICVPKFSETG 410

Query: 182 IAVMLNLRNLECHTLSFGTQISS 250
           +AVMLNLR+L+CH LSFGTQ SS
Sbjct: 411 VAVMLNLRDLDCHALSFGTQFSS 433


>ref|XP_003625260.1| DNA polymerase delta small subunit [Medicago truncatula]
           gi|355500275|gb|AES81478.1| DNA polymerase delta small
           subunit [Medicago truncatula]
          Length = 454

 Score =  160 bits (406), Expect = 8e-38
 Identities = 70/81 (86%), Positives = 78/81 (96%)
 Frame = +2

Query: 2   PTAPNTLGCYPFTDRDPFFIESCPHVYFVGNQDKYATRIVKGSEGQLVRVICIPKFSETG 181
           PTAPNTLGCYP+TDRDPFFIESCPHVYFVGNQDKY TR++KGSEGQLVR++C+PKFSETG
Sbjct: 351 PTAPNTLGCYPYTDRDPFFIESCPHVYFVGNQDKYDTRVIKGSEGQLVRLVCVPKFSETG 410

Query: 182 IAVMLNLRNLECHTLSFGTQI 244
           +AVMLNLR+LECH LSFGT I
Sbjct: 411 VAVMLNLRDLECHALSFGTPI 431


>ref|XP_002279533.1| PREDICTED: DNA polymerase delta small subunit [Vitis vinifera]
           gi|297739835|emb|CBI30017.3| unnamed protein product
           [Vitis vinifera]
          Length = 439

 Score =  159 bits (403), Expect = 2e-37
 Identities = 70/83 (84%), Positives = 78/83 (93%)
 Frame = +2

Query: 2   PTAPNTLGCYPFTDRDPFFIESCPHVYFVGNQDKYATRIVKGSEGQLVRVICIPKFSETG 181
           PTAPNTLGCYPFTDRDPF IESCPHVYFVGNQDKY TR++KGSEGQ+VR+ICIPKF ETG
Sbjct: 357 PTAPNTLGCYPFTDRDPFLIESCPHVYFVGNQDKYETRLIKGSEGQVVRLICIPKFCETG 416

Query: 182 IAVMLNLRNLECHTLSFGTQISS 250
           +AV+LN+RNLECH LSFGT+ SS
Sbjct: 417 VAVVLNMRNLECHALSFGTEFSS 439


>emb|CAN71889.1| hypothetical protein VITISV_040861 [Vitis vinifera]
          Length = 439

 Score =  159 bits (403), Expect = 2e-37
 Identities = 70/83 (84%), Positives = 78/83 (93%)
 Frame = +2

Query: 2   PTAPNTLGCYPFTDRDPFFIESCPHVYFVGNQDKYATRIVKGSEGQLVRVICIPKFSETG 181
           PTAPNTLGCYPFTDRDPF IESCPHVYFVGNQDKY TR++KGSEGQ+VR+ICIPKF ETG
Sbjct: 357 PTAPNTLGCYPFTDRDPFLIESCPHVYFVGNQDKYETRLIKGSEGQVVRLICIPKFCETG 416

Query: 182 IAVMLNLRNLECHTLSFGTQISS 250
           +AV+LN+RNLECH LSFGT+ SS
Sbjct: 417 VAVVLNMRNLECHALSFGTEFSS 439


>ref|XP_003554206.1| PREDICTED: DNA polymerase delta small subunit-like [Glycine max]
          Length = 433

 Score =  158 bits (400), Expect = 4e-37
 Identities = 67/83 (80%), Positives = 80/83 (96%)
 Frame = +2

Query: 2   PTAPNTLGCYPFTDRDPFFIESCPHVYFVGNQDKYATRIVKGSEGQLVRVICIPKFSETG 181
           PTAPNTLGCYP+TD+DPFFIESCPHVYF+GNQDK+ TR++KGSEGQLVR++C+PKFSETG
Sbjct: 351 PTAPNTLGCYPYTDKDPFFIESCPHVYFIGNQDKFETRVIKGSEGQLVRLVCVPKFSETG 410

Query: 182 IAVMLNLRNLECHTLSFGTQISS 250
           +AVMLNLR+L+C+ LSFGTQ SS
Sbjct: 411 VAVMLNLRDLDCYALSFGTQFSS 433


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