BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00012536
         (833 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD34613.1|AF153277_1 DNA-directed RNA polymerase IIa [Nicoti...   206   5e-51
ref|XP_002510834.1| DNA-directed RNA polymerase subunit rpb6, pu...   201   2e-49
ref|XP_002318240.1| predicted protein [Populus trichocarpa] gi|2...   197   2e-48
ref|XP_002279544.1| PREDICTED: DNA-directed RNA polymerases I, I...   196   5e-48
ref|XP_002322450.1| predicted protein [Populus trichocarpa] gi|2...   196   7e-48

>gb|AAD34613.1|AF153277_1 DNA-directed RNA polymerase IIa [Nicotiana tabacum]
           gi|4960152|gb|AAD34614.1|AF153278_1 DNA-directed RNA
           polymerase IIb [Nicotiana tabacum]
          Length = 143

 Score =  206 bits (524), Expect = 5e-51
 Identities = 99/108 (91%), Positives = 104/108 (96%)
 Frame = +1

Query: 172 EDVPDPLLGDNEDKEEQEAVEKPRKTIKYMTKYERARILGTRALQISMNAPVMVELEGET 351
           ED+PDPLLG+ E+K EQE VE+PRKT KYMTKYERARILGTRALQISMNAPVMVELEGET
Sbjct: 35  EDIPDPLLGEGEEKTEQEPVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGET 94

Query: 352 DPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG 495
           DPLEIAMKELR+RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG
Sbjct: 95  DPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG 142


>ref|XP_002510834.1| DNA-directed RNA polymerase subunit rpb6, putative [Ricinus
           communis] gi|223549949|gb|EEF51436.1| DNA-directed RNA
           polymerase subunit rpb6, putative [Ricinus communis]
          Length = 124

 Score =  201 bits (511), Expect = 2e-49
 Identities = 101/113 (89%), Positives = 105/113 (92%), Gaps = 1/113 (0%)
 Frame = +1

Query: 163 NKEEDVP-DPLLGDNEDKEEQEAVEKPRKTIKYMTKYERARILGTRALQISMNAPVMVEL 339
           N  EDVP DP+  + EDKEEQEA E+PRKT KYMTKYERARILGTRALQISMNAPVMVEL
Sbjct: 14  NNNEDVPGDPI--ETEDKEEQEAAERPRKTSKYMTKYERARILGTRALQISMNAPVMVEL 71

Query: 340 EGETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 498
           EGETDPLEIAMKELR+RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD
Sbjct: 72  EGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 124


>ref|XP_002318240.1| predicted protein [Populus trichocarpa] gi|222858913|gb|EEE96460.1|
           predicted protein [Populus trichocarpa]
          Length = 143

 Score =  197 bits (501), Expect = 2e-48
 Identities = 97/112 (86%), Positives = 104/112 (92%)
 Frame = +1

Query: 163 NKEEDVPDPLLGDNEDKEEQEAVEKPRKTIKYMTKYERARILGTRALQISMNAPVMVELE 342
           N E+D  +P+  + EDKEEQE VE+PRKT K+MTKYERARILGTRALQISMNAPVMVELE
Sbjct: 34  NNEDDKGEPI--ETEDKEEQEPVERPRKTSKFMTKYERARILGTRALQISMNAPVMVELE 91

Query: 343 GETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 498
           GETDPLEIAMKELR+RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD
Sbjct: 92  GETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 143


>ref|XP_002279544.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC2 isoform 1 [Vitis vinifera]
           gi|297741100|emb|CBI31831.3| unnamed protein product
           [Vitis vinifera]
          Length = 142

 Score =  196 bits (498), Expect = 5e-48
 Identities = 97/112 (86%), Positives = 102/112 (91%)
 Frame = +1

Query: 163 NKEEDVPDPLLGDNEDKEEQEAVEKPRKTIKYMTKYERARILGTRALQISMNAPVMVELE 342
           N  EDVPD L  + ++KE  E VE+PRKT KYMTKYERARILGTRALQISMNAPVMVELE
Sbjct: 33  NNNEDVPDAL--EEQEKEVHETVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELE 90

Query: 343 GETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 498
           GETDPLEIAMKELR+RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD
Sbjct: 91  GETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 142


>ref|XP_002322450.1| predicted protein [Populus trichocarpa] gi|222869446|gb|EEF06577.1|
           predicted protein [Populus trichocarpa]
          Length = 143

 Score =  196 bits (497), Expect = 7e-48
 Identities = 96/112 (85%), Positives = 103/112 (91%)
 Frame = +1

Query: 163 NKEEDVPDPLLGDNEDKEEQEAVEKPRKTIKYMTKYERARILGTRALQISMNAPVMVELE 342
           N E+D  +P+  + EDKEEQ  VE+PRKT K+MTKYERARILGTRALQISMNAPVMVELE
Sbjct: 34  NNEDDTGEPI--ETEDKEEQAPVERPRKTSKFMTKYERARILGTRALQISMNAPVMVELE 91

Query: 343 GETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 498
           GETDPLEIAMKELR+RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD
Sbjct: 92  GETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 143