BLASTX nr result
ID: Atractylodes22_contig00012534
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00012534
(2131 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002268516.1| PREDICTED: pentatricopeptide repeat-containi... 767 0.0
ref|XP_004135752.1| PREDICTED: pentatricopeptide repeat-containi... 765 0.0
ref|XP_002533784.1| pentatricopeptide repeat-containing protein,... 756 0.0
ref|XP_003539000.1| PREDICTED: pentatricopeptide repeat-containi... 741 0.0
emb|CBI31083.3| unnamed protein product [Vitis vinifera] 738 0.0
>ref|XP_002268516.1| PREDICTED: pentatricopeptide repeat-containing protein At1g30610,
chloroplastic-like [Vitis vinifera]
Length = 846
Score = 767 bits (1980), Expect = 0.0
Identities = 391/673 (58%), Positives = 490/673 (72%), Gaps = 6/673 (0%)
Frame = +3
Query: 123 RVLRNSKQDEVMKKWTRKKLDSEEGQMVARVKAMGTNGFQKTEQRDAKFQGQSFNMKXXX 302
R R QDE+ W K D E + K + QRD K +G++F
Sbjct: 154 RSARGLVQDELDLGW---KNDDENSSEIWEGKGSSKS------QRDDKLKGRAFKADSSG 204
Query: 303 XXXXXXXXXYVMDGVVDK---ERVVHVKKLSGRSDR--VVKHDNYYSMEIERAAFKPLEE 467
+ M+G K + + +KK + R ++ +EIERAAFK E
Sbjct: 205 LGSKGMRKRHEMNGAQVKKVGDEKIGIKKGNFNKSRKGFLEKGGDDILEIERAAFKNFEA 264
Query: 468 FQDVCDQPRVSRVDMDERIQRLAKCLNGASIDTPEWNFSKMMRSARIKFADFSIIRLIQI 647
F D+ + VS+++M+ERIQ+LAK LNGA ID PEW FSKMMRSA+I+F D SI+R+IQI
Sbjct: 265 FNDITVKKPVSKMEMEERIQKLAKLLNGADIDMPEWMFSKMMRSAKIRFTDHSILRVIQI 324
Query: 648 LGNYGNWRQVLQVIEWMQSRERFKSNRIRHIYTAALDALGKARRPVEALNVFDTMQQQMS 827
LG GNWR+ LQV+EW+Q RERFKS+++R+IYTAALD LGKARRPVEALNVF M QQMS
Sbjct: 325 LGKLGNWRRALQVLEWLQLRERFKSHKLRYIYTAALDVLGKARRPVEALNVFYAMLQQMS 384
Query: 828 SYPDLMAYHSIAVTLGQAGHMRELFHVIDSMRSPPKKKLHTGVLQKWDPRLEPDIIIYNA 1007
SYPDL+AYH IAVTLGQAGHM+ELF VID MRSPP+KK TG L+KWDPRLEPDI++YNA
Sbjct: 385 SYPDLVAYHCIAVTLGQAGHMKELFDVIDCMRSPPRKKFKTGALEKWDPRLEPDIVVYNA 444
Query: 1008 VLNACVRQKNLEGAFWVLQELKQQGQKPNSITYGLVMEVMLACEKYNLVHEFFNKMQKSF 1187
VLNACVR+K EGAFWVLQ+LKQQ QKP+ TYGLVMEVM C KYNLVHEFF K+QKS
Sbjct: 445 VLNACVRRKQWEGAFWVLQQLKQQSQKPSITTYGLVMEVMFVCGKYNLVHEFFWKVQKSS 504
Query: 1188 IPNPLTYKVLVNTLWREGKVDEATLAVEDMEKRGIVGSAPLYYDLARCLCSAGRCEQALL 1367
IPN LTYKVLVNTLWREGK DEA LAV+DMEKRG+VGSA LYYDLARCLCSAGRC++AL+
Sbjct: 505 IPNALTYKVLVNTLWREGKTDEAVLAVQDMEKRGVVGSAALYYDLARCLCSAGRCQEALM 564
Query: 1368 QVEKVCKVANKPLVVTYTGLIQASLDSGKIESGIYIFNHMRKFCAPNLVTYNIMLKGYLD 1547
Q+EK+CKVANKPLVVTYTGLIQ LDSG I++ +IFN M +FC+PNL+T N+MLK YL+
Sbjct: 565 QIEKICKVANKPLVVTYTGLIQVCLDSGNIQNAAFIFNQMHEFCSPNLITCNVMLKAYLE 624
Query: 1548 HQKFEEARQLFHGLLENGKHVTSEADYRNVALPDIHTFNLMLDACLVNQQWDDLEFVYTK 1727
H+ FEEA+ LF +L +G H++S++DY + LPDI+TFN M+DAC ++W DLE+VY +
Sbjct: 625 HRMFEEAKGLFGKMLGDGNHISSKSDYNDRVLPDIYTFNTMIDACNAEKRWHDLEYVYER 684
Query: 1728 MLQHGHHFNAKRHSRMILKASKAGKVNLLETTWKRLMDGDQVPPPPLVQEMFCKKVEQED 1907
ML+HG HFNAKRH R+IL AS+AGK LLETTWK L G+ PPPL++E FC K+E+ D
Sbjct: 685 MLRHGFHFNAKRHLRIILDASRAGKEELLETTWKSLA-GEGRVPPPLIKERFCMKLEKGD 743
Query: 1908 HASAFSCLICLPSTE-SHKYSRNSWLNRFRDDPDVFREETLRQLIDKINTLLLRNEEPNT 2084
A+A S + E +S+ +WLN F ++ F+ E+L +L+ + + + R + PN
Sbjct: 744 CAAAVSSITGHHMNELQEPFSKRAWLNLFTENAGRFQTESLVELMHEASVRIARADMPNP 803
Query: 2085 ILLNLMKSCKQIL 2123
+L NL+ SCK+ L
Sbjct: 804 VLQNLLASCKEFL 816
>ref|XP_004135752.1| PREDICTED: pentatricopeptide repeat-containing protein At1g30610,
chloroplastic-like [Cucumis sativus]
Length = 902
Score = 765 bits (1975), Expect = 0.0
Identities = 368/593 (62%), Positives = 466/593 (78%)
Frame = +3
Query: 339 DGVVDKERVVHVKKLSGRSDRVVKHDNYYSMEIERAAFKPLEEFQDVCDQPRVSRVDMDE 518
D V K+ + S R ++ + S+E+E AAF + F D+ D+PRVS+++M+E
Sbjct: 295 DKVGRKKTEQSYRGTSTSGKRFLEFNEKNSLEVEHAAFNNFDAF-DIMDKPRVSKMEMEE 353
Query: 519 RIQRLAKCLNGASIDTPEWNFSKMMRSARIKFADFSIIRLIQILGNYGNWRQVLQVIEWM 698
RIQ L+K LNGA ID PEW FS+MMRSA+I+++D SI+R+IQ+LG GNWR+VLQ+IEW+
Sbjct: 354 RIQMLSKRLNGADIDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRRVLQIIEWL 413
Query: 699 QSRERFKSNRIRHIYTAALDALGKARRPVEALNVFDTMQQQMSSYPDLMAYHSIAVTLGQ 878
Q RERFKS+++R IYT ALD LGKARRPVEALNVF MQ+ SSYPDL+AYHSIAVTLGQ
Sbjct: 414 QMRERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQ 473
Query: 879 AGHMRELFHVIDSMRSPPKKKLHTGVLQKWDPRLEPDIIIYNAVLNACVRQKNLEGAFWV 1058
AG+MRELF VIDSMRSPPKKK TGVL+KWDPRL+PDI+IYNAVLNACV++KNLEGAFWV
Sbjct: 474 AGYMRELFDVIDSMRSPPKKKFKTGVLEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWV 533
Query: 1059 LQELKQQGQKPNSITYGLVMEVMLACEKYNLVHEFFNKMQKSFIPNPLTYKVLVNTLWRE 1238
LQELK+Q +P++ TYGLVMEVML C KYNLVHEFF K+QKS IPN LTYKVLVNTLW+E
Sbjct: 534 LQELKKQSLQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKE 593
Query: 1239 GKVDEATLAVEDMEKRGIVGSAPLYYDLARCLCSAGRCEQALLQVEKVCKVANKPLVVTY 1418
GK DEA LA+E+ME RGIVGSA LYYD ARCLCSAGRC++AL+Q+EK+CKVANKPLVVTY
Sbjct: 594 GKTDEAVLAIENMEIRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTY 653
Query: 1419 TGLIQASLDSGKIESGIYIFNHMRKFCAPNLVTYNIMLKGYLDHQKFEEARQLFHGLLEN 1598
TGLIQA LDS ++S +YIFNHM+ FC+PNLVTYNI+LKGYL+H FEEAR+LF L E
Sbjct: 654 TGLIQACLDSKDLQSAVYIFNHMKAFCSPNLVTYNILLKGYLEHGMFEEARELFQNLSEQ 713
Query: 1599 GKHVTSEADYRNVALPDIHTFNLMLDACLVNQQWDDLEFVYTKMLQHGHHFNAKRHSRMI 1778
+++++ +DYR+ LPDI+ FN MLDA ++WDD + Y +M +G+HFN KRH RMI
Sbjct: 714 RRNISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMI 773
Query: 1779 LKASKAGKVNLLETTWKRLMDGDQVPPPPLVQEMFCKKVEQEDHASAFSCLICLPSTESH 1958
L+A++ GK LLETTWK L D+ PPPPL++E FC K+ + D++ A S + S ++H
Sbjct: 774 LEAARGGKDELLETTWKHLAQADRTPPPPLLKERFCMKLARGDYSEALSSIWSHNSGDAH 833
Query: 1959 KYSRNSWLNRFRDDPDVFREETLRQLIDKINTLLLRNEEPNTILLNLMKSCKQ 2117
+S ++WLN ++ F +T+ +LI K+ +L RNE PN + NL+ SCK+
Sbjct: 834 HFSESAWLNLLKEKR--FPRDTVIELIHKVGMVLTRNESPNPVFKNLLLSCKE 884
>ref|XP_002533784.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223526285|gb|EEF28597.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 856
Score = 756 bits (1953), Expect = 0.0
Identities = 358/564 (63%), Positives = 446/564 (79%)
Frame = +3
Query: 432 EIERAAFKPLEEFQDVCDQPRVSRVDMDERIQRLAKCLNGASIDTPEWNFSKMMRSARIK 611
E+ERAAFK LEE+ + +P+ S+ ++++R+Q+LAKCLNGA ID PEW FSKMMRSARIK
Sbjct: 270 EVERAAFKSLEEYNNFTGRPQNSKREVEDRLQKLAKCLNGADIDMPEWMFSKMMRSARIK 329
Query: 612 FADFSIIRLIQILGNYGNWRQVLQVIEWMQSRERFKSNRIRHIYTAALDALGKARRPVEA 791
+ D S++R+IQILG GNWR+VLQVIEW+Q RERFKS+R+R+IYT AL+ LGKA+RPVEA
Sbjct: 330 YTDHSVLRIIQILGKLGNWRRVLQVIEWLQMRERFKSHRLRNIYTTALNVLGKAQRPVEA 389
Query: 792 LNVFDTMQQQMSSYPDLMAYHSIAVTLGQAGHMRELFHVIDSMRSPPKKKLHTGVLQKWD 971
LNVF MQQQMSSYPDL+AYH IAVTLGQAGHM +LF VIDSMRSPPKKK + KWD
Sbjct: 390 LNVFHVMQQQMSSYPDLVAYHCIAVTLGQAGHMEQLFDVIDSMRSPPKKKFKMAAVHKWD 449
Query: 972 PRLEPDIIIYNAVLNACVRQKNLEGAFWVLQELKQQGQKPNSITYGLVMEVMLACEKYNL 1151
PRLEPDI++YNAVLNACV++K EGAFWVLQ+LKQQG +P++ TYGL+MEVM AC KYNL
Sbjct: 450 PRLEPDIVVYNAVLNACVQRKQWEGAFWVLQQLKQQGLQPSTTTYGLIMEVMFACGKYNL 509
Query: 1152 VHEFFNKMQKSFIPNPLTYKVLVNTLWREGKVDEATLAVEDMEKRGIVGSAPLYYDLARC 1331
VHEFF K+QKS IPN L YKVLVNTLWREGK DEA LAVE+ME+RGIVG A LYYDLARC
Sbjct: 510 VHEFFRKVQKSSIPNALVYKVLVNTLWREGKTDEAVLAVEEMERRGIVGFAALYYDLARC 569
Query: 1332 LCSAGRCEQALLQVEKVCKVANKPLVVTYTGLIQASLDSGKIESGIYIFNHMRKFCAPNL 1511
LCSAGRC++ALLQ+EK+C+VANKPLVVTYTGLIQA LDSG I + +YIFN M+ FC+PNL
Sbjct: 570 LCSAGRCQEALLQIEKICRVANKPLVVTYTGLIQACLDSGNIHNAVYIFNQMKHFCSPNL 629
Query: 1512 VTYNIMLKGYLDHQKFEEARQLFHGLLENGKHVTSEADYRNVALPDIHTFNLMLDACLVN 1691
VT+N+MLK Y +H FE+A++LFH + E+ H+ DY+ +PDI+TFN MLDAC+
Sbjct: 630 VTFNVMLKAYFEHGLFEDAKELFHKMTEDSNHIRGNHDYKVRVIPDIYTFNTMLDACISE 689
Query: 1692 QQWDDLEFVYTKMLQHGHHFNAKRHSRMILKASKAGKVNLLETTWKRLMDGDQVPPPPLV 1871
+ WDD E+VY +ML HG HFN KRH RMIL AS+AGKV LE TWK L D++PPP L+
Sbjct: 690 KSWDDFEYVYRRMLHHGFHFNGKRHLRMILDASRAGKVEPLEMTWKHLARADRIPPPNLI 749
Query: 1872 QEMFCKKVEQEDHASAFSCLICLPSTESHKYSRNSWLNRFRDDPDVFREETLRQLIDKIN 2051
+E F +E++D SA +C+ P ES + + +WLN F+++ + R +TL QL +++
Sbjct: 750 KERFRIMLEKDDCKSALACITTNPMGESPAFHKVAWLNLFKENAEQIRRDTLIQLKHEVS 809
Query: 2052 TLLLRNEEPNTILLNLMKSCKQIL 2123
L+ P+ +L NL+ SC L
Sbjct: 810 MLV---NPPDPVLQNLLASCNDFL 830
>ref|XP_003539000.1| PREDICTED: pentatricopeptide repeat-containing protein At1g30610,
chloroplastic-like [Glycine max]
Length = 893
Score = 741 bits (1914), Expect = 0.0
Identities = 358/604 (59%), Positives = 466/604 (77%), Gaps = 7/604 (1%)
Frame = +3
Query: 333 VMDGVVDKERVVHVKKLSGRS-------DRVVKHDNYYSMEIERAAFKPLEEFQDVCDQP 491
V D +D++R L+ R+ DR DN +E+ERAAF+ LE+ +V +
Sbjct: 278 VQDRGLDRKRHTENGSLAYRNGSRKRFIDRGYDSDN---LEVERAAFENLEDPNNVIRKS 334
Query: 492 RVSRVDMDERIQRLAKCLNGASIDTPEWNFSKMMRSARIKFADFSIIRLIQILGNYGNWR 671
+ S +M+E+IQ+LA LNGA I+ PEW FSKM+RSAR+KF D++I R+I ILG GNWR
Sbjct: 335 QFSHKEMEEKIQKLANSLNGADINLPEWMFSKMIRSARLKFNDYAITRIIIILGKLGNWR 394
Query: 672 QVLQVIEWMQSRERFKSNRIRHIYTAALDALGKARRPVEALNVFDTMQQQMSSYPDLMAY 851
+V+QVIEW+Q RERFKS+++RHIYTAALDALGK+RRPVEALN+F MQQQMSSYPDL+AY
Sbjct: 395 RVIQVIEWLQKRERFKSHKLRHIYTAALDALGKSRRPVEALNIFHAMQQQMSSYPDLVAY 454
Query: 852 HSIAVTLGQAGHMRELFHVIDSMRSPPKKKLHTGVLQKWDPRLEPDIIIYNAVLNACVRQ 1031
HSIAVTLGQAGHM+ELF VID MRSPPKKK TG+ + WDPRLEPDI++Y+AVLNACVR+
Sbjct: 455 HSIAVTLGQAGHMKELFDVIDIMRSPPKKKFKTGIFENWDPRLEPDIVVYHAVLNACVRR 514
Query: 1032 KNLEGAFWVLQELKQQGQKPNSITYGLVMEVMLACEKYNLVHEFFNKMQKSFIPNPLTYK 1211
K EGAFWVLQ+LK+QGQ P++ TYGLVMEVML+C KYNLVHEFF K+QKSF PN LTY+
Sbjct: 515 KQWEGAFWVLQQLKKQGQPPSATTYGLVMEVMLSCGKYNLVHEFFRKLQKSFSPNSLTYR 574
Query: 1212 VLVNTLWREGKVDEATLAVEDMEKRGIVGSAPLYYDLARCLCSAGRCEQALLQVEKVCKV 1391
VLVNTLW+EGK DEA LAV++ME+RGIVGSA LYYDLARCL +AGR +AL Q++K+CKV
Sbjct: 575 VLVNTLWQEGKPDEAILAVQEMERRGIVGSASLYYDLARCLSAAGRSHEALKQIDKICKV 634
Query: 1392 ANKPLVVTYTGLIQASLDSGKIESGIYIFNHMRKFCAPNLVTYNIMLKGYLDHQKFEEAR 1571
ANKPLVVTYTGL+QASLD+G I+ G YIF M++ CAPNLVT NI+LK YL+H F+EA+
Sbjct: 635 ANKPLVVTYTGLMQASLDAGNIQDGAYIFEKMKEICAPNLVTCNIILKAYLEHGMFQEAK 694
Query: 1572 QLFHGLLENGKHVTSEADYRNVALPDIHTFNLMLDACLVNQQWDDLEFVYTKMLQHGHHF 1751
LF + EN + DY+ + +PD ++FN MLDAC+ ++WD + VY +ML HG+HF
Sbjct: 695 VLFEQMSENANRLRGNTDYKMLVVPDTYSFNTMLDACVAEKRWDYFDHVYQRMLYHGYHF 754
Query: 1752 NAKRHSRMILKASKAGKVNLLETTWKRLMDGDQVPPPPLVQEMFCKKVEQEDHASAFSCL 1931
N KRH RMIL+ASKAGK LE TWK L D D++PP PL++E FC K+E++D+ +A +C+
Sbjct: 755 NPKRHLRMILEASKAGKERPLEITWKHLTDTDRIPPAPLIKERFCAKLEKDDYVAALTCI 814
Query: 1932 ICLPSTESHKYSRNSWLNRFRDDPDVFREETLRQLIDKINTLLLRNEEPNTILLNLMKSC 2111
I P + +S++SWL F+++ F+++T+ L+++ + ++ N PN L L++SC
Sbjct: 815 INNPPKDLQPFSKSSWLKLFKENSQRFQKDTIVGLMNEASNIVSNNSFPNPTLEYLIQSC 874
Query: 2112 KQIL 2123
K+ L
Sbjct: 875 KEFL 878
>emb|CBI31083.3| unnamed protein product [Vitis vinifera]
Length = 647
Score = 738 bits (1905), Expect = 0.0
Identities = 356/541 (65%), Positives = 437/541 (80%), Gaps = 1/541 (0%)
Frame = +3
Query: 504 VDMDERIQRLAKCLNGASIDTPEWNFSKMMRSARIKFADFSIIRLIQILGNYGNWRQVLQ 683
++M+ERIQ+LAK LNGA ID PEW FSKMMRSA+I+F D SI+R+IQILG GNWR+ LQ
Sbjct: 1 MEMEERIQKLAKLLNGADIDMPEWMFSKMMRSAKIRFTDHSILRVIQILGKLGNWRRALQ 60
Query: 684 VIEWMQSRERFKSNRIRHIYTAALDALGKARRPVEALNVFDTMQQQMSSYPDLMAYHSIA 863
V+EW+Q RERFKS+++R+IYTAALD LGKARRPVEALNVF M QQMSSYPDL+AYH IA
Sbjct: 61 VLEWLQLRERFKSHKLRYIYTAALDVLGKARRPVEALNVFYAMLQQMSSYPDLVAYHCIA 120
Query: 864 VTLGQAGHMRELFHVIDSMRSPPKKKLHTGVLQKWDPRLEPDIIIYNAVLNACVRQKNLE 1043
VTLGQAGHM+ELF VID MRSPP+KK TG L+KWDPRLEPDI++YNAVLNACVR+K E
Sbjct: 121 VTLGQAGHMKELFDVIDCMRSPPRKKFKTGALEKWDPRLEPDIVVYNAVLNACVRRKQWE 180
Query: 1044 GAFWVLQELKQQGQKPNSITYGLVMEVMLACEKYNLVHEFFNKMQKSFIPNPLTYKVLVN 1223
GAFWVLQ+LKQQ QKP+ TYGLVMEVM C KYNLVHEFF K+QKS IPN LTYKVLVN
Sbjct: 181 GAFWVLQQLKQQSQKPSITTYGLVMEVMFVCGKYNLVHEFFWKVQKSSIPNALTYKVLVN 240
Query: 1224 TLWREGKVDEATLAVEDMEKRGIVGSAPLYYDLARCLCSAGRCEQALLQVEKVCKVANKP 1403
TLWREGK DEA LAV+DMEKRG+VGSA LYYDLARCLCSAGRC++AL+Q+EK+CKVANKP
Sbjct: 241 TLWREGKTDEAVLAVQDMEKRGVVGSAALYYDLARCLCSAGRCQEALMQIEKICKVANKP 300
Query: 1404 LVVTYTGLIQASLDSGKIESGIYIFNHMRKFCAPNLVTYNIMLKGYLDHQKFEEARQLFH 1583
LVVTYTGLIQ LDSG I++ +IFN M +FC+PNL+T N+MLK YL+H+ FEEA+ LF
Sbjct: 301 LVVTYTGLIQVCLDSGNIQNAAFIFNQMHEFCSPNLITCNVMLKAYLEHRMFEEAKGLFG 360
Query: 1584 GLLENGKHVTSEADYRNVALPDIHTFNLMLDACLVNQQWDDLEFVYTKMLQHGHHFNAKR 1763
+L +G H++S++DY + LPDI+TFN M+DAC ++W DLE+VY +ML+HG HFNAKR
Sbjct: 361 KMLGDGNHISSKSDYNDRVLPDIYTFNTMIDACNAEKRWHDLEYVYERMLRHGFHFNAKR 420
Query: 1764 HSRMILKASKAGKVNLLETTWKRLMDGDQVPPPPLVQEMFCKKVEQEDHASAFSCLICLP 1943
H R+IL AS+AGK LLETTWK L G+ PPPL++E FC K+E+ D A+A S +
Sbjct: 421 HLRIILDASRAGKEELLETTWKSLA-GEGRVPPPLIKERFCMKLEKGDCAAAVSSITGHH 479
Query: 1944 STE-SHKYSRNSWLNRFRDDPDVFREETLRQLIDKINTLLLRNEEPNTILLNLMKSCKQI 2120
E +S+ +WLN F ++ F+ E+L +L+ + + + R + PN +L NL+ SCK+
Sbjct: 480 MNELQEPFSKRAWLNLFTENAGRFQTESLVELMHEASVRIARADMPNPVLQNLLASCKEF 539
Query: 2121 L 2123
L
Sbjct: 540 L 540