BLASTX nr result

ID: Atractylodes22_contig00012492 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00012492
         (1581 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268952.2| PREDICTED: pentatricopeptide repeat-containi...   452   e-124
ref|XP_002323959.1| predicted protein [Populus trichocarpa] gi|2...   452   e-124
ref|XP_004136896.1| PREDICTED: pentatricopeptide repeat-containi...   446   e-123
ref|XP_003531533.1| PREDICTED: pentatricopeptide repeat-containi...   446   e-123
ref|XP_003545705.1| PREDICTED: pentatricopeptide repeat-containi...   445   e-122

>ref|XP_002268952.2| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
            mitochondrial [Vitis vinifera]
          Length = 396

 Score =  452 bits (1163), Expect = e-124
 Identities = 237/401 (59%), Positives = 292/401 (72%)
 Frame = -3

Query: 1474 RSIFVGLIRNYIRQTRTNGLLRSLSSTASKSEVVYDESPIAFPEDESDYSGGDDLKSRIF 1295
            RS+F+GL R  I +       R LSS   +SEV+ +ESP + PE+       DDLKSRIF
Sbjct: 4    RSLFLGLTRQCISEKFA---FRLLSSRTLRSEVL-EESPNS-PEN-------DDLKSRIF 51

Query: 1294 RLRLPKRSATNVIEKWISEGHQITIYDLRRISKELRKSHRYKHALELSEWMVSHGEFELS 1115
            +LRLPKRS TNV+++W+ EG+Q+ I +LR ISKELR++ RYKHALE+SEWMVSH EFELS
Sbjct: 52   KLRLPKRSVTNVLQRWLGEGNQVHISELRNISKELRRAQRYKHALEISEWMVSHDEFELS 111

Query: 1114 DSDYAFRIDLMTKVFGIHAAERYFEGLPPNAKTTESYTALLHSYAASKLTSKAEDLYERI 935
            DSD A RIDLMT+VFGI AAERYFEGLP  AKT+E+YTALLHSYA +KL  KAE+LYERI
Sbjct: 112  DSDNAVRIDLMTRVFGIDAAERYFEGLPSAAKTSETYTALLHSYAGAKLAEKAEELYERI 171

Query: 934  KESNLPLSAITYNELMTLYMXXXXXXXXXXXXXXXXXXXXSPDIYTYNLWISSCASALKI 755
            KESN+PL+ + YNE+MTLYM                     PD++TYNLW+SSCA+ L I
Sbjct: 172  KESNVPLNILLYNEMMTLYMSVGQVEKVSLVVEELKRQKVVPDLFTYNLWVSSCAATLDI 231

Query: 754  DEVRNILDEMTAHEVGSSESWARYVKLVHIYLTSGHLVNSEFNSVVESEKGITQREWITY 575
            D VR IL EM ++   +++ W RY  L +IY+ +GHLVNS  NSVVE+    TQR+WITY
Sbjct: 232  DGVRRILKEM-SNNSSANDGWVRYRNLANIYIMAGHLVNSASNSVVEAGTNTTQRDWITY 290

Query: 574  DFLIILHCALGNKGTLDQIWKSLRMTNHKMISRNYACILSAYLMLDHFDEVGEVIDQWKT 395
            DFLIIL+  LGNK  +DQIWKSL+MT  K+ SR+Y CILS+Y+ML H  +VG VID+WK 
Sbjct: 291  DFLIILYAGLGNKDKIDQIWKSLKMTKQKIKSRSYVCILSSYVMLGHIKDVGIVIDEWKK 350

Query: 394  SATTDFDVSVCDRLCKAFQEVGLIEKAEAFHKLVCDKKCDP 272
            S TTDFD+SV  RL  AF E+ LIE+AE FHKL+  K C P
Sbjct: 351  STTTDFDISVFYRLLDAFAELRLIEEAETFHKLLIRKSCLP 391


>ref|XP_002323959.1| predicted protein [Populus trichocarpa] gi|222866961|gb|EEF04092.1|
            predicted protein [Populus trichocarpa]
          Length = 355

 Score =  452 bits (1162), Expect = e-124
 Identities = 222/349 (63%), Positives = 272/349 (77%), Gaps = 2/349 (0%)
 Frame = -3

Query: 1318 DDLKSRIFRLRLPKRSATNVIEKWISEGHQITIYDLRRISKELRKSHRYKHALELSEWMV 1139
            DDLK RIFRLRLPKRS TNVI+KW+ EG+ ++  +LR ISKELRKS R+KHALE+SEWMV
Sbjct: 8    DDLKGRIFRLRLPKRSVTNVIDKWVREGNTVSSSELRHISKELRKSQRFKHALEISEWMV 67

Query: 1138 SHGEFELSDSDYAFRIDLMTKVFGIHAAERYFEGLPPNAKTTESYTALLHSYAASKLTSK 959
            +H EFELSD+D+A RIDLMTKVFG+ AAERYF+GLP  AKTTE+YTALLHSYAA+KL  K
Sbjct: 68   AHEEFELSDTDHASRIDLMTKVFGVDAAERYFDGLPLAAKTTETYTALLHSYAAAKLIEK 127

Query: 958  AEDLYERIKESNLPLSAITYNELMTLYMXXXXXXXXXXXXXXXXXXXXSPDIYTYNLWIS 779
            AE+ Y+RIK SNLP +A+ YNE+MTLYM                    +PDI+TYNLWIS
Sbjct: 128  AEEFYKRIKGSNLPFTALMYNEMMTLYMSVGQLEKVSQVVEELKHQKVAPDIFTYNLWIS 187

Query: 778  SCASALKIDEVRNILDEMTAHEVGSSESWARYVKLVHIYLTSGHLVNSEFN--SVVESEK 605
            SCA+AL ID+VR ILDEM + + G ++ W RY+K+V+IY+T+GHLVN+E +  +VVE+EK
Sbjct: 188  SCAAALNIDKVRRILDEM-SQDSGVNDDWMRYIKIVNIYVTAGHLVNAESSTAAVVEAEK 246

Query: 604  GITQREWITYDFLIILHCALGNKGTLDQIWKSLRMTNHKMISRNYACILSAYLMLDHFDE 425
             ITQREWITYDFL+IL+  LG K  +DQIWKSLRMTN KM SRN+ CILS+YLML H  E
Sbjct: 247  KITQREWITYDFLVILYAGLGKKDKIDQIWKSLRMTNQKMTSRNFVCILSSYLMLGHLKE 306

Query: 424  VGEVIDQWKTSATTDFDVSVCDRLCKAFQEVGLIEKAEAFHKLVCDKKC 278
            VGE++DQWK S TTDFD+S C+RL  A   +GL E A  FH L+ ++ C
Sbjct: 307  VGEIVDQWKQSTTTDFDISACNRLLDAISCLGLTEIANNFHMLLIERNC 355


>ref|XP_004136896.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
            mitochondrial-like [Cucumis sativus]
            gi|449478839|ref|XP_004155431.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g09450,
            mitochondrial-like [Cucumis sativus]
          Length = 406

 Score =  446 bits (1147), Expect = e-123
 Identities = 234/414 (56%), Positives = 293/414 (70%), Gaps = 11/414 (2%)
 Frame = -3

Query: 1480 AARSIFVGLIRNYIRQTRTNGLLRSLSSTASKSEVVYDESPIAF----------PEDES- 1334
            A+R++F+   RN           R   + + KS  V++E+ ++             DES 
Sbjct: 2    ASRALFLAFSRN-----------RGFLNQSFKSTPVFNEANVSNYCSHGALRSESFDESV 50

Query: 1333 DYSGGDDLKSRIFRLRLPKRSATNVIEKWISEGHQITIYDLRRISKELRKSHRYKHALEL 1154
            +Y   +DLKSRIF+LRLPKRSA  V+E+W SEG+Q+TI +LR ISKELRK  RYKHALE+
Sbjct: 51   NYEEFNDLKSRIFQLRLPKRSAIRVLERWTSEGNQVTIAELRNISKELRKIQRYKHALEI 110

Query: 1153 SEWMVSHGEFELSDSDYAFRIDLMTKVFGIHAAERYFEGLPPNAKTTESYTALLHSYAAS 974
             EWMVSH + ELSDSD+A RIDLMTKVFG+ AAERYFEGLP +AKT E+YTALLHS+A S
Sbjct: 111  LEWMVSHNQSELSDSDFAIRIDLMTKVFGVDAAERYFEGLPIDAKTCETYTALLHSFAGS 170

Query: 973  KLTSKAEDLYERIKESNLPLSAITYNELMTLYMXXXXXXXXXXXXXXXXXXXXSPDIYTY 794
            KLT KAE LYE++KES++PL+A+ +NE+MTLY                      PDI+TY
Sbjct: 171  KLTDKAETLYEKMKESDIPLTALPFNEMMTLYTSIGQVEKVSSIVDDLKQRMVHPDIFTY 230

Query: 793  NLWISSCASALKIDEVRNILDEMTAHEVGSSESWARYVKLVHIYLTSGHLVNSEFNSVVE 614
            NLWISS A+AL ID V+ IL+EM  H   S+E+W RY++LV+IY+ S +L++SE NSVVE
Sbjct: 231  NLWISSLAAALNIDGVKQILNEMN-HNPNSNENWVRYIELVNIYVKSANLLHSESNSVVE 289

Query: 613  SEKGITQREWITYDFLIILHCALGNKGTLDQIWKSLRMTNHKMISRNYACILSAYLMLDH 434
            S  GI+QREWITYD LIIL+  LGNK  +DQIW+SLRMT  KM SRNY CI+S YLMLD 
Sbjct: 290  SVSGISQREWITYDLLIILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICIVSCYLMLDD 349

Query: 433  FDEVGEVIDQWKTSATTDFDVSVCDRLCKAFQEVGLIEKAEAFHKLVCDKKCDP 272
              E+GEVIDQWK S TTDFD+S C+RL  AF E GL EKA +F  ++  K C+P
Sbjct: 350  LKEIGEVIDQWKQSTTTDFDISSCNRLVNAFIEAGLHEKANSFVNVLIQKNCEP 403


>ref|XP_003531533.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
            mitochondrial-like [Glycine max]
          Length = 395

 Score =  446 bits (1147), Expect = e-123
 Identities = 235/396 (59%), Positives = 286/396 (72%)
 Frame = -3

Query: 1471 SIFVGLIRNYIRQTRTNGLLRSLSSTASKSEVVYDESPIAFPEDESDYSGGDDLKSRIFR 1292
            S+F+ L RN       N   R +SS A  S++V          +ES     DDL+SRIFR
Sbjct: 5    SLFLSLRRNSGLACLLNRT-RFVSSGAVSSDLV----------EESVEGVDDDLRSRIFR 53

Query: 1291 LRLPKRSATNVIEKWISEGHQITIYDLRRISKELRKSHRYKHALELSEWMVSHGEFELSD 1112
            LRLPKRSATNV++KW+ +G+ +T+  LR ISKELR+S RYKHALE+SEWMVSH E+ELSD
Sbjct: 54   LRLPKRSATNVLQKWVLQGNPVTLSQLRDISKELRRSQRYKHALEISEWMVSHEEYELSD 113

Query: 1111 SDYAFRIDLMTKVFGIHAAERYFEGLPPNAKTTESYTALLHSYAASKLTSKAEDLYERIK 932
            SDYA RIDL TKVFGI AAERYFEGLP   KT E+YTALLHSYA +KLT KAE+LY+RIK
Sbjct: 114  SDYAARIDLTTKVFGIDAAERYFEGLPLATKTAETYTALLHSYAGAKLTKKAEELYQRIK 173

Query: 931  ESNLPLSAITYNELMTLYMXXXXXXXXXXXXXXXXXXXXSPDIYTYNLWISSCASALKID 752
            +SNL   A+TYNE+MTLYM                    SPDI+TYNLWIS CA+ L ID
Sbjct: 174  DSNLSFDALTYNEMMTLYMSVGQFEKVPSVVEELKQQKVSPDIFTYNLWISYCAAILNID 233

Query: 751  EVRNILDEMTAHEVGSSESWARYVKLVHIYLTSGHLVNSEFNSVVESEKGITQREWITYD 572
            EVR ILDEM +H  GS+ESW RY+ L +IY++ GHL N+  N++VE+EK ITQR+WITYD
Sbjct: 234  EVRRILDEM-SHGAGSNESWIRYLNLANIYISVGHLDNASSNTLVETEKRITQRQWITYD 292

Query: 571  FLIILHCALGNKGTLDQIWKSLRMTNHKMISRNYACILSAYLMLDHFDEVGEVIDQWKTS 392
            FLIIL+  LG+K  LDQIW SLRMT  KMISRNY CI+S+YLML H  EVGEVIDQWK S
Sbjct: 293  FLIILYGGLGSKDKLDQIWNSLRMTKQKMISRNYICIISSYLMLGHTKEVGEVIDQWKQS 352

Query: 391  ATTDFDVSVCDRLCKAFQEVGLIEKAEAFHKLVCDK 284
             TTDFD+  C ++  AF+++GL E A   + ++ +K
Sbjct: 353  TTTDFDMLACKKIMVAFRDMGLAEIANNLNMILIEK 388


>ref|XP_003545705.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
            mitochondrial-like [Glycine max]
          Length = 399

 Score =  445 bits (1144), Expect = e-122
 Identities = 237/405 (58%), Positives = 289/405 (71%), Gaps = 6/405 (1%)
 Frame = -3

Query: 1480 AARSIFVGLIRNYIRQTRTNGLL------RSLSSTASKSEVVYDESPIAFPEDESDYSGG 1319
            A RS+F+ L R      R +GL       R +SS A  S++V           E    G 
Sbjct: 2    AHRSLFLSLRR--FSSCRNSGLACVLNRTRFVSSGAVSSDLV-----------EESVEGD 48

Query: 1318 DDLKSRIFRLRLPKRSATNVIEKWISEGHQITIYDLRRISKELRKSHRYKHALELSEWMV 1139
            DDL+SRIFRLRLPKRSATNV++KW+ +G+ IT+  LR ISKELR+S RYKHALE+SEWMV
Sbjct: 49   DDLRSRIFRLRLPKRSATNVLQKWVLQGNPITLSQLRDISKELRRSQRYKHALEISEWMV 108

Query: 1138 SHGEFELSDSDYAFRIDLMTKVFGIHAAERYFEGLPPNAKTTESYTALLHSYAASKLTSK 959
            S+ E+ELSDSDYA RIDLMT+VFGI AAERYFEGLP   KTTE+YTALLHSYA +KLT K
Sbjct: 109  SNEEYELSDSDYAVRIDLMTQVFGIDAAERYFEGLPLATKTTETYTALLHSYAGAKLTEK 168

Query: 958  AEDLYERIKESNLPLSAITYNELMTLYMXXXXXXXXXXXXXXXXXXXXSPDIYTYNLWIS 779
            AE+LY+RIK+SNL   A+TYNE+MTLYM                    SPDI+TYNLWIS
Sbjct: 169  AEELYQRIKDSNLSFDALTYNEMMTLYMSVGQFEKVPIVVEELKQQKVSPDIFTYNLWIS 228

Query: 778  SCASALKIDEVRNILDEMTAHEVGSSESWARYVKLVHIYLTSGHLVNSEFNSVVESEKGI 599
            SCA+ L IDEVR ILDEM +H  GS+ESW RY+ L +IY++  HL N+  N++VE+EK I
Sbjct: 229  SCAAILNIDEVRRILDEM-SHGAGSNESWIRYLNLANIYISVAHLDNASSNTLVETEKRI 287

Query: 598  TQREWITYDFLIILHCALGNKGTLDQIWKSLRMTNHKMISRNYACILSAYLMLDHFDEVG 419
            TQR+WITYDFLIIL+  LG+K  LDQIW SL MT  KMISRNY CI+S+YLML    EVG
Sbjct: 288  TQRQWITYDFLIILYGGLGSKDKLDQIWNSLGMTKQKMISRNYMCIISSYLMLGLTKEVG 347

Query: 418  EVIDQWKTSATTDFDVSVCDRLCKAFQEVGLIEKAEAFHKLVCDK 284
            EVIDQWK S TTDFD+  C ++  AF+++GL E A   + ++ +K
Sbjct: 348  EVIDQWKQSTTTDFDMLACKKILVAFRDIGLAEIANNLNVILIEK 392


Top