BLASTX nr result

ID: Atractylodes22_contig00012480 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00012480
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004173704.1| PREDICTED: eukaryotic translation initiation...   139   3e-31
ref|XP_004139759.1| PREDICTED: eukaryotic translation initiation...   139   3e-31
gb|AEL98639.1| putative translation initiation factor 3 subunit ...   137   9e-31
ref|XP_002337976.1| predicted protein [Populus trichocarpa] gi|2...   137   1e-30
ref|XP_002308719.1| predicted protein [Populus trichocarpa] gi|2...   137   1e-30

>ref|XP_004173704.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           B-like, partial [Cucumis sativus]
          Length = 483

 Score =  139 bits (349), Expect = 3e-31
 Identities = 65/81 (80%), Positives = 73/81 (90%), Gaps = 4/81 (4%)
 Frame = +3

Query: 3   FRIKERDIPIEVFELDNKNDKVISFAWEPKGQRFAVIHGDNPRPDVSFYSVK----GGKV 170
           FRIKERDIPIEV EL+NKNDK+I+FAWEPKG RFAVIHGDNP+PD+SFYS++     G+V
Sbjct: 211 FRIKERDIPIEVLELENKNDKIIAFAWEPKGHRFAVIHGDNPKPDISFYSMRSTHSSGRV 270

Query: 171 SKLTTLKQKQANALFWSPGGR 233
           SKLTTLK KQANALFWSPGGR
Sbjct: 271 SKLTTLKGKQANALFWSPGGR 291


>ref|XP_004139759.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           B-like [Cucumis sativus]
          Length = 718

 Score =  139 bits (349), Expect = 3e-31
 Identities = 65/81 (80%), Positives = 73/81 (90%), Gaps = 4/81 (4%)
 Frame = +3

Query: 3   FRIKERDIPIEVFELDNKNDKVISFAWEPKGQRFAVIHGDNPRPDVSFYSVK----GGKV 170
           FRIKERDIPIEV EL+NKNDK+I+FAWEPKG RFAVIHGDNP+PD+SFYS++     G+V
Sbjct: 446 FRIKERDIPIEVLELENKNDKIIAFAWEPKGHRFAVIHGDNPKPDISFYSMRSTHSSGRV 505

Query: 171 SKLTTLKQKQANALFWSPGGR 233
           SKLTTLK KQANALFWSPGGR
Sbjct: 506 SKLTTLKGKQANALFWSPGGR 526


>gb|AEL98639.1| putative translation initiation factor 3 subunit B, partial [Silene
           latifolia]
          Length = 517

 Score =  137 bits (345), Expect = 9e-31
 Identities = 65/81 (80%), Positives = 72/81 (88%), Gaps = 4/81 (4%)
 Frame = +3

Query: 3   FRIKERDIPIEVFELDNKNDKVISFAWEPKGQRFAVIHGDNPRPDVSFYSVK----GGKV 170
           FRIKERDIPIEV EL+NKNDK+I+FAWEPKG RFAVIHGDNPRPD+SFYS+K      +V
Sbjct: 436 FRIKERDIPIEVLELENKNDKIIAFAWEPKGHRFAVIHGDNPRPDISFYSMKTTHHTSRV 495

Query: 171 SKLTTLKQKQANALFWSPGGR 233
           SKLTTLK KQANAL+WSPGGR
Sbjct: 496 SKLTTLKTKQANALYWSPGGR 516


>ref|XP_002337976.1| predicted protein [Populus trichocarpa] gi|222870102|gb|EEF07233.1|
           predicted protein [Populus trichocarpa]
          Length = 317

 Score =  137 bits (344), Expect = 1e-30
 Identities = 66/81 (81%), Positives = 72/81 (88%), Gaps = 4/81 (4%)
 Frame = +3

Query: 3   FRIKERDIPIEVFELDNKNDKVISFAWEPKGQRFAVIHGDNPRPDVSFYSVK----GGKV 170
           FRIKERDIPIEV ELDNKNDK+I+FAWEPKG RFAVIHGD+PRPDVSFYS++     G+V
Sbjct: 195 FRIKERDIPIEVLELDNKNDKIIAFAWEPKGHRFAVIHGDSPRPDVSFYSMRTAHNTGRV 254

Query: 171 SKLTTLKQKQANALFWSPGGR 233
           SKLTTLK KQANALFWSP GR
Sbjct: 255 SKLTTLKGKQANALFWSPSGR 275


>ref|XP_002308719.1| predicted protein [Populus trichocarpa] gi|222854695|gb|EEE92242.1|
           predicted protein [Populus trichocarpa]
          Length = 719

 Score =  137 bits (344), Expect = 1e-30
 Identities = 66/81 (81%), Positives = 72/81 (88%), Gaps = 4/81 (4%)
 Frame = +3

Query: 3   FRIKERDIPIEVFELDNKNDKVISFAWEPKGQRFAVIHGDNPRPDVSFYSVK----GGKV 170
           FRIKERDIPIEV ELDNKNDK+I+FAWEPKG RFAVIHGD+PRPDVSFYS++     G+V
Sbjct: 445 FRIKERDIPIEVLELDNKNDKIIAFAWEPKGHRFAVIHGDSPRPDVSFYSMRTAHNTGRV 504

Query: 171 SKLTTLKQKQANALFWSPGGR 233
           SKLTTLK KQANALFWSP GR
Sbjct: 505 SKLTTLKGKQANALFWSPSGR 525


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