BLASTX nr result

ID: Atractylodes22_contig00012464 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00012464
         (1301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635142.1| PREDICTED: uncharacterized protein LOC100244...   235   2e-59
emb|CBI18563.3| unnamed protein product [Vitis vinifera]              230   7e-58
ref|XP_002310753.1| f-box family protein [Populus trichocarpa] g...   229   2e-57
emb|CAN72540.1| hypothetical protein VITISV_028751 [Vitis vinifera]   225   2e-56
ref|XP_002306453.1| f-box family protein [Populus trichocarpa] g...   209   2e-51

>ref|XP_003635142.1| PREDICTED: uncharacterized protein LOC100244391 [Vitis vinifera]
          Length = 332

 Score =  235 bits (600), Expect = 2e-59
 Identities = 141/275 (51%), Positives = 171/275 (62%), Gaps = 16/275 (5%)
 Frame = -2

Query: 895 CYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKGTTIATAVGKPISATGKLK 716
           CYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNK T+++TAVGK  S+ GK K
Sbjct: 77  CYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKNTSVSTAVGK--SSAGKAK 134

Query: 715 AVVSSELGKSGFINGFEHEFTPSPILWSGPPQTSHLLSLLRATQNPNPNFA--SNSVTHM 542
           + V SE+GKSG   GF+HE   +PILW+  PQ SHLL+LLRATQNPNPN +  SNSVT +
Sbjct: 135 SAV-SEIGKSGLGGGFDHEIPSNPILWAS-PQNSHLLALLRATQNPNPNPSPISNSVT-V 191

Query: 541 KDQGFMVGSNMSS--------------LGFEPXXXXXXXXXXXXLWRXXXXXXXXXXXXX 404
           KD G M+GS+M+S              +G +              WR             
Sbjct: 192 KDDGVMIGSHMTSESGVGTGAVNIARNMGLDHLNQLPSIGLCSSYWRNNQHQTQQHQQNS 251

Query: 403 XXXQRGIMATGHEVQNTENNPGQRYQRIRSSSPANYYHHDQTTPLILGGNAANXXXXXXX 224
              Q+     G EVQNT     + YQR+RSS+  NYY     +P++L    ++       
Sbjct: 252 HHQQQNGFILG-EVQNT--GIQELYQRLRSST--NYY--TDHSPVVLSNAVSS------S 298

Query: 223 XTILDSAPVLASGELGFWNQTLPWSDLPTANGAYP 119
            +IL+SAP+ A GELG+WN T  WSDLPT NGAYP
Sbjct: 299 SSILESAPI-AGGELGYWNPTFSWSDLPTTNGAYP 332


>emb|CBI18563.3| unnamed protein product [Vitis vinifera]
          Length = 425

 Score =  230 bits (586), Expect = 7e-58
 Identities = 141/289 (48%), Positives = 171/289 (59%), Gaps = 30/289 (10%)
 Frame = -2

Query: 895 CYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKGTTIATAVGKPISATGKLK 716
           CYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNK T+++TAVGK  S+ GK K
Sbjct: 150 CYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKNTSVSTAVGK--SSAGKAK 207

Query: 715 AVVSSELGKSGFINGFEHEFTPSPILWSGPPQTSHLLSLLRATQNPNPNFA--SNSVTHM 542
           + V SE+GKSG   GF+HE   +PILW+  PQ SHLL+LLRATQNPNPN +  SNSVT +
Sbjct: 208 SAV-SEIGKSGLGGGFDHEIPSNPILWAS-PQNSHLLALLRATQNPNPNPSPISNSVT-V 264

Query: 541 KDQGFMVGSNMSS--------------LGFEPXXXXXXXXXXXXLWRXXXXXXXXXXXXX 404
           KD G M+GS+M+S              +G +              WR             
Sbjct: 265 KDDGVMIGSHMTSESGVGTGAVNIARNMGLDHLNQLPSIGLCSSYWRNNQHQTQQHQQNS 324

Query: 403 XXXQRGIMATGHEVQNTENNPGQRYQRIRSSSPANYYHHDQTTPLILGGNAAN------- 245
              Q+     G EVQNT     + YQR+RSS+  NYY     +P++L    ++       
Sbjct: 325 HHQQQNGFILG-EVQNT--GIQELYQRLRSST--NYY--TDHSPVVLSNAVSSSSSILES 377

Query: 244 -------XXXXXXXXTILDSAPVLASGELGFWNQTLPWSDLPTANGAYP 119
                          +IL+SAP+ A GELG+WN T  WSDLPT NGAYP
Sbjct: 378 APIAGVLSNAVSSSSSILESAPI-AGGELGYWNPTFSWSDLPTTNGAYP 425


>ref|XP_002310753.1| f-box family protein [Populus trichocarpa]
           gi|118482074|gb|ABK92968.1| unknown [Populus
           trichocarpa] gi|222853656|gb|EEE91203.1| f-box family
           protein [Populus trichocarpa]
          Length = 323

 Score =  229 bits (583), Expect = 2e-57
 Identities = 131/273 (47%), Positives = 167/273 (61%), Gaps = 14/273 (5%)
 Frame = -2

Query: 895 CYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKGTTIATAVGKPISATGKLK 716
           CYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNK T+++ +VGK  S T K+K
Sbjct: 78  CYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKNTSVSASVGK--SGTNKMK 135

Query: 715 AVVSSELGKSGFINGFEHEFTPSPILWSGPPQTSHLLSLLRATQNPNPNFASNSVTHMKD 536
             ++S++G+SGF NGFEHE + SPI+W+  PQ SH+L+LLRATQNPNP+  SNS+  +K+
Sbjct: 136 -TMASDIGRSGFGNGFEHELSSSPIMWAS-PQNSHILALLRATQNPNPSTLSNSI-FVKE 192

Query: 535 QGFMVGS-------------NMSSLGFEPXXXXXXXXXXXXLWRXXXXXXXXXXXXXXXX 395
           +G ++G+             N  +LG +P             W+                
Sbjct: 193 EGGLIGNQFISEPGVGTAALNARTLGLDPISQVPSLGLCSPFWKSNQH------------ 240

Query: 394 QRGIMATGHEVQNTENNPGQR-YQRIRSSSPANYYHHDQTTPLILGGNAANXXXXXXXXT 218
                  G  V   +N+  Q  YQR+RSS+  NYY  D  + ++L   A +        T
Sbjct: 241 ----QQNGFTVGEAQNSGIQELYQRLRSST--NYY-TDNPSAIVLSNVATS--SSTSTST 291

Query: 217 ILDSAPVLASGELGFWNQTLPWSDLPTANGAYP 119
           IL+SAPV A GELG+WN    WSDLPT NGAYP
Sbjct: 292 ILESAPV-AGGELGYWNPAFSWSDLPTTNGAYP 323


>emb|CAN72540.1| hypothetical protein VITISV_028751 [Vitis vinifera]
          Length = 309

 Score =  225 bits (574), Expect = 2e-56
 Identities = 134/261 (51%), Positives = 163/261 (62%), Gaps = 2/261 (0%)
 Frame = -2

Query: 895 CYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKGTTIATAVGKPISATGKLK 716
           CYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNK T+++TAVGK  S+ GK K
Sbjct: 77  CYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKNTSVSTAVGK--SSAGKAK 134

Query: 715 AVVSSELGKSGFINGFEHEFTPSPILWSGPPQTSHLLSLLRATQNPNPNFA--SNSVTHM 542
           + V SE+GKSG   GF+HE   +PILW+  PQ SHLL+LLRATQNPNPN +  SNSVT +
Sbjct: 135 SAV-SEIGKSGLGGGFDHEIPSNPILWAS-PQNSHLLALLRATQNPNPNPSPISNSVT-V 191

Query: 541 KDQGFMVGSNMSSLGFEPXXXXXXXXXXXXLWRXXXXXXXXXXXXXXXXQRGIMATGHEV 362
           KD G M+GS+M+S                                        MA  + V
Sbjct: 192 KDDGVMIGSHMTS-----------ESGVGTALTGETINIKLNSTNKTATINSKMAL-YLV 239

Query: 361 QNTENNPGQRYQRIRSSSPANYYHHDQTTPLILGGNAANXXXXXXXXTILDSAPVLASGE 182
           +       + YQR+RSS+  NYY     +P++L    ++        +IL+SAP+ A GE
Sbjct: 240 KFQNTGIQELYQRLRSST--NYY--TDHSPVVLSNAVSS------SSSILESAPI-AGGE 288

Query: 181 LGFWNQTLPWSDLPTANGAYP 119
           LG+WN T  WSDLPT NGAYP
Sbjct: 289 LGYWNPTFSWSDLPTTNGAYP 309


>ref|XP_002306453.1| f-box family protein [Populus trichocarpa]
           gi|222855902|gb|EEE93449.1| f-box family protein
           [Populus trichocarpa]
          Length = 269

 Score =  209 bits (531), Expect = 2e-51
 Identities = 118/260 (45%), Positives = 153/260 (58%), Gaps = 1/260 (0%)
 Frame = -2

Query: 895 CYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKGTTIATAVGKPISATGKLK 716
           CYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNK T+++ +VGK  S T K+K
Sbjct: 68  CYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKNTSVSASVGK--SGTSKIK 125

Query: 715 AVVSSELGKSGFINGFEHEFTPSPILWSGPPQTSHLLSLLRATQNPNPNFASNSVTHMKD 536
             ++SE+G+SGF NGF++E + SPI+    PQ SH+ +LLRATQNPNP+   NS++ +K 
Sbjct: 126 -TIASEIGRSGFGNGFDYELSSSPIM-RASPQNSHIFALLRATQNPNPSTPCNSIS-VKQ 182

Query: 535 QGFMVGSNMSSLGFEPXXXXXXXXXXXXLWRXXXXXXXXXXXXXXXXQRGIMATGHEVQN 356
           +GF++G +M                                                   
Sbjct: 183 EGFLIGKHMI-------------------------------------------------- 192

Query: 355 TENNPGQR-YQRIRSSSPANYYHHDQTTPLILGGNAANXXXXXXXXTILDSAPVLASGEL 179
           T+N+  Q  YQR+RSS+  NYY  + +  ++     ++        TIL+SAPV A GE 
Sbjct: 193 TQNSGIQELYQRLRSST--NYYTDNPSAIVLSNVTTSSSTSTSTSSTILESAPV-AGGEF 249

Query: 178 GFWNQTLPWSDLPTANGAYP 119
            +WNQ   WS LPT NGAYP
Sbjct: 250 SYWNQAFSWSGLPTTNGAYP 269


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