BLASTX nr result

ID: Atractylodes22_contig00012428 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00012428
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39354.3| unnamed protein product [Vitis vinifera]              134   6e-30
ref|XP_002276927.2| PREDICTED: TMV resistance protein N-like [Vi...   132   3e-29
gb|AGF69192.1| TMV resistance protein N-like protein 6 [Vitis la...   130   1e-28
ref|XP_003634612.1| PREDICTED: TMV resistance protein N-like [Vi...   130   1e-28
emb|CBI39350.3| unnamed protein product [Vitis vinifera]              130   1e-28

>emb|CBI39354.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score =  134 bits (338), Expect = 6e-30
 Identities = 57/133 (42%), Positives = 93/133 (69%)
 Frame = -1

Query: 405 PFKFFPSDFYPEHIVSIDLSYGHIKEIWTSPKCFGRLKVMKLKHCRNLTRTPDFTKITNL 226
           P K FPS+F+PE +V +++ +  +K++W   K F +LK +KL H ++LT+TPDF+ + NL
Sbjct: 446 PLKSFPSNFHPEKLVELNMCFSRLKQLWEGKKGFEKLKSIKLSHSQHLTKTPDFSGVPNL 505

Query: 225 EVLNLEGCVKLAKVHSSIGMLKRLVVLNMKDCKRFKSFPCKVEWDTLEVMNLSGCSKVDK 46
             L L+GC  L +VH SIG LK+L+ LN++ CK+ KSF   +  ++L+++ LSGCSK+ K
Sbjct: 506 RRLILKGCTSLVEVHPSIGALKKLIFLNLEGCKKLKSFSSSIHMESLQILTLSGCSKLKK 565

Query: 45  LPDFFDTIQTLKE 7
            P+  + +++L E
Sbjct: 566 FPEIQENMESLME 578


>ref|XP_002276927.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1133

 Score =  132 bits (332), Expect = 3e-29
 Identities = 64/136 (47%), Positives = 89/136 (65%), Gaps = 1/136 (0%)
 Frame = -1

Query: 405  PFKFFPSDFYPEHIVSIDLSYGHIKEIWTSPKCFGRLKVMKLKHCRNLTRTPDFTKITNL 226
            P K  P+DF  +++V + + Y  IK++W   K    LK M LKH + LT TPDF+++TNL
Sbjct: 627  PLKSLPNDFNLKNLVDLSMPYSQIKQLWKGTKVLENLKFMNLKHSKFLTETPDFSRVTNL 686

Query: 225  EVLNLEGCVKLAKVHSSIGMLKRLVVLNMKDCKRFKSFP-CKVEWDTLEVMNLSGCSKVD 49
            E L L+GC+ L KVH S+G L +L  L++K+CK  KS P C  +   LEV  LSGCSK +
Sbjct: 687  ERLVLKGCISLYKVHPSLGDLNKLNFLSLKNCKMLKSLPSCICDLKCLEVFILSGCSKFE 746

Query: 48   KLPDFFDTIQTLKEFC 1
            +LP+ F  ++ LKEFC
Sbjct: 747  ELPENFGNLEMLKEFC 762


>gb|AGF69192.1| TMV resistance protein N-like protein 6 [Vitis labrusca]
          Length = 1219

 Score =  130 bits (327), Expect = 1e-28
 Identities = 55/123 (44%), Positives = 87/123 (70%)
 Frame = -1

Query: 405 PFKFFPSDFYPEHIVSIDLSYGHIKEIWTSPKCFGRLKVMKLKHCRNLTRTPDFTKITNL 226
           P K FPS+F+PE +V +++ +  +K++W   K F +LK +KL H ++LT+TPDF+ + NL
Sbjct: 612 PLKSFPSNFHPEKLVELNMCFSRLKQLWEGKKGFEKLKSIKLSHSQHLTKTPDFSGVPNL 671

Query: 225 EVLNLEGCVKLAKVHSSIGMLKRLVVLNMKDCKRFKSFPCKVEWDTLEVMNLSGCSKVDK 46
             L L+GC  L +VH SIG LK+L+ LN++ CK+ KSF   +  ++L+++ LSGCSK+ K
Sbjct: 672 RRLILKGCTSLVEVHPSIGALKKLIFLNLEGCKKLKSFSSSIHMESLQILTLSGCSKLKK 731

Query: 45  LPD 37
            P+
Sbjct: 732 FPE 734



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 45/147 (30%), Positives = 69/147 (46%), Gaps = 25/147 (17%)
 Frame = -1

Query: 372  EHIVSIDLSYGHIKEIWTSPKCFGRLKVMKLKHCRNLTRTP-DFTKITNLEVLNLEGCVK 196
            EH+ ++ L    IK +  S +    L ++ LK C++L   P    K+ +L+ L L  C +
Sbjct: 740  EHLPNLSLEGTAIKGLPLSIENLTGLALLNLKECKSLESLPRSIFKLKSLKTLILSNCTR 799

Query: 195  LAKVH-----------------------SSIGMLKRLVVLNMKDCKRFKSFPCK-VEWDT 88
            L K+                        SSIG L  LV LN+K+CK+  S P    E  +
Sbjct: 800  LKKLPEIQENMESLMELFLDGSGIIELPSSIGCLNGLVFLNLKNCKKLASLPQSFCELTS 859

Query: 87   LEVMNLSGCSKVDKLPDFFDTIQTLKE 7
            L  + L GCS++ +LPD   ++Q L E
Sbjct: 860  LGTLTLCGCSELKELPDDLGSLQCLAE 886


>ref|XP_003634612.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1162

 Score =  130 bits (327), Expect = 1e-28
 Identities = 55/123 (44%), Positives = 87/123 (70%)
 Frame = -1

Query: 405 PFKFFPSDFYPEHIVSIDLSYGHIKEIWTSPKCFGRLKVMKLKHCRNLTRTPDFTKITNL 226
           P K FPS+F+PE +V +++ +  +K++W   K F +LK +KL H ++LT+TPDF+ + NL
Sbjct: 626 PLKSFPSNFHPEKLVELNMCFSRLKQLWEGKKGFEKLKSIKLSHSQHLTKTPDFSGVPNL 685

Query: 225 EVLNLEGCVKLAKVHSSIGMLKRLVVLNMKDCKRFKSFPCKVEWDTLEVMNLSGCSKVDK 46
             L L+GC  L +VH SIG LK+L+ LN++ CK+ KSF   +  ++L+++ LSGCSK+ K
Sbjct: 686 RRLILKGCTSLVEVHPSIGALKKLIFLNLEGCKKLKSFSSSIHMESLQILTLSGCSKLKK 745

Query: 45  LPD 37
            P+
Sbjct: 746 FPE 748


>emb|CBI39350.3| unnamed protein product [Vitis vinifera]
          Length = 696

 Score =  130 bits (327), Expect = 1e-28
 Identities = 56/133 (42%), Positives = 91/133 (68%)
 Frame = -1

Query: 405 PFKFFPSDFYPEHIVSIDLSYGHIKEIWTSPKCFGRLKVMKLKHCRNLTRTPDFTKITNL 226
           P K FPS+F+PE +V +++ +  +K+ W   K F +LK +KL H ++LT+ PDF+ + NL
Sbjct: 486 PLKSFPSNFHPEKLVELNMCFSRLKQPWEGKKGFEKLKSIKLSHSQHLTKIPDFSGVPNL 545

Query: 225 EVLNLEGCVKLAKVHSSIGMLKRLVVLNMKDCKRFKSFPCKVEWDTLEVMNLSGCSKVDK 46
             L L+GC  L +VH SIG LK+L+ LN++ CK+ KSF   +  ++L+++ LSGCSK+ K
Sbjct: 546 RRLILKGCTSLVEVHPSIGALKKLIFLNLEGCKKLKSFSSSIHMESLQILTLSGCSKLKK 605

Query: 45  LPDFFDTIQTLKE 7
            P+  + +++L E
Sbjct: 606 FPEIQENMESLME 618


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