BLASTX nr result

ID: Atractylodes22_contig00012408 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00012408
         (1054 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149759.1| PREDICTED: translation initiation factor IF-...   105   2e-20
ref|XP_002279490.2| PREDICTED: translation initiation factor IF-...   102   1e-19
ref|XP_002872554.1| hypothetical protein ARALYDRAFT_489954 [Arab...    82   2e-13
ref|NP_192854.2| translation initiation factor IF-2 [Arabidopsis...    82   3e-13
ref|XP_003566671.1| PREDICTED: translation initiation factor IF-...    81   5e-13

>ref|XP_004149759.1| PREDICTED: translation initiation factor IF-2-like [Cucumis
           sativus]
          Length = 724

 Score =  105 bits (262), Expect = 2e-20
 Identities = 65/156 (41%), Positives = 83/156 (53%), Gaps = 1/156 (0%)
 Frame = -1

Query: 466 MAWREFGKKGIHVSLSRILTSRASRTTAVRISFSGVESKSLXXXXXXXXXXXXXXXXXXX 287
           MAWRE GKKG+H  L R  T   SR   VR +F   +   +                   
Sbjct: 1   MAWRELGKKGMHAGLRRTFT--CSRRHIVRPNFLTTDEVVIKLIPASSRFIPDVPCGSAY 58

Query: 286 XXXXXXXXXTSKFLLRRFHASPELL-GRGGNDTVGLQTPKKGKFKKRPQNAKPPVETPYV 110
                    T +   R FH+S ELL GRG +   GL+T KK KF ++    +PPVE PYV
Sbjct: 59  HGSDFYVASTIEAPRRCFHSSAELLAGRGHDKEFGLKTQKKEKFVRKDGRNQPPVEAPYV 118

Query: 109 PPKLKKTAKSSSDRTIEIFEGMTTLELAKRCGQSVA 2
           PPK K +  S SD+TIEIF+GMT +ELAKR G+S++
Sbjct: 119 PPKPKHSIGSVSDKTIEIFDGMTIVELAKRSGESIS 154


>ref|XP_002279490.2| PREDICTED: translation initiation factor IF-2-like [Vitis vinifera]
           gi|296089697|emb|CBI39516.3| unnamed protein product
           [Vitis vinifera]
          Length = 725

 Score =  102 bits (255), Expect = 1e-19
 Identities = 65/156 (41%), Positives = 83/156 (53%), Gaps = 1/156 (0%)
 Frame = -1

Query: 466 MAWREFGKKGIHVSLSRILTSRASRTTAVRISFSGVESKSLXXXXXXXXXXXXXXXXXXX 287
           MAWRE GKK I  +L++ L S  SR     +S   +E  +L                   
Sbjct: 1   MAWREVGKKSICANLTKALASTKSRDVPDPLSTPILED-ALKSISSSIKHVPVFSASKSS 59

Query: 286 XXXXXXXXXTSKFLLRRFHASPELLGRGGNDT-VGLQTPKKGKFKKRPQNAKPPVETPYV 110
                     ++ L RRFHASP LL R  +D   GL+TPK+ K+ KR    +PPVE PYV
Sbjct: 60  LGADKCQILPNRPLTRRFHASPGLLARRRSDEPFGLKTPKREKYVKRESKMQPPVEAPYV 119

Query: 109 PPKLKKTAKSSSDRTIEIFEGMTTLELAKRCGQSVA 2
            PK K+T KS  DRTI+IFEGMT  ELAK   +S++
Sbjct: 120 HPKPKRTTKSLPDRTIDIFEGMTIGELAKHTNESIS 155


>ref|XP_002872554.1| hypothetical protein ARALYDRAFT_489954 [Arabidopsis lyrata subsp.
           lyrata] gi|297318391|gb|EFH48813.1| hypothetical protein
           ARALYDRAFT_489954 [Arabidopsis lyrata subsp. lyrata]
          Length = 746

 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 47/91 (51%), Positives = 60/91 (65%), Gaps = 10/91 (10%)
 Frame = -1

Query: 244 LRRFHASPELLGRGGNDTVGL--------QTPK-KGKFKKRPQNA-KPPVETPYVPPKLK 95
           +R FHAS E L +   D   L        QT K KGKF KR + + KPPVE PYVPP+LK
Sbjct: 81  IRYFHASRETLAKRKEDADRLLSHRERKKQTVKTKGKFSKREKKSDKPPVEAPYVPPRLK 140

Query: 94  KTAKSSSDRTIEIFEGMTTLELAKRCGQSVA 2
           + AK   ++T++IFEGMT LEL++R G+SVA
Sbjct: 141 RLAKGLPEKTVDIFEGMTLLELSRRTGESVA 171


>ref|NP_192854.2| translation initiation factor IF-2 [Arabidopsis thaliana]
           gi|51536512|gb|AAU05494.1| At4g11160 [Arabidopsis
           thaliana] gi|51969726|dbj|BAD43555.1| putative
           translation initiation factor IF-2 [Arabidopsis
           thaliana] gi|51970152|dbj|BAD43768.1| putative
           translation initiation factor IF-2 [Arabidopsis
           thaliana] gi|51970248|dbj|BAD43816.1| putative
           translation initiation factor IF-2 [Arabidopsis
           thaliana] gi|51970442|dbj|BAD43913.1| putative
           translation initiation factor IF-2 [Arabidopsis
           thaliana] gi|53850507|gb|AAU95430.1| At4g11160
           [Arabidopsis thaliana] gi|62318855|dbj|BAD93919.1|
           translation initiation factor IF-2 like protein
           [Arabidopsis thaliana] gi|62319537|dbj|BAD94965.1|
           translation initiation factor IF-2 like protein
           [Arabidopsis thaliana] gi|332657579|gb|AEE82979.1|
           translation initiation factor IF-2 [Arabidopsis
           thaliana]
          Length = 743

 Score = 81.6 bits (200), Expect = 3e-13
 Identities = 48/91 (52%), Positives = 58/91 (63%), Gaps = 10/91 (10%)
 Frame = -1

Query: 244 LRRFHASPELLGRGGNDTVGL--------QTPK-KGKFKKRPQNA-KPPVETPYVPPKLK 95
           +R FHAS E L +   D   L        QT K KGKF KR +   KPPVE PYVPP+LK
Sbjct: 78  IRYFHASRETLAKRKEDADRLLSHRERKKQTVKTKGKFSKREKKTDKPPVEAPYVPPRLK 137

Query: 94  KTAKSSSDRTIEIFEGMTTLELAKRCGQSVA 2
           + AK    +T++IFEGMT LEL+KR G+SVA
Sbjct: 138 RLAKGLPGKTVDIFEGMTLLELSKRTGESVA 168


>ref|XP_003566671.1| PREDICTED: translation initiation factor IF-2-like [Brachypodium
           distachyon]
          Length = 711

 Score = 80.9 bits (198), Expect = 5e-13
 Identities = 40/83 (48%), Positives = 55/83 (66%), Gaps = 2/83 (2%)
 Frame = -1

Query: 244 LRRFHASPELLG--RGGNDTVGLQTPKKGKFKKRPQNAKPPVETPYVPPKLKKTAKSSSD 71
           +R FHA   +L   R   D VGL+ PKK K  ++    +PPVE PYV PK K T K+S D
Sbjct: 60  IRNFHAGVYMLAWSRKKEDVVGLKAPKKEKRVRKETRTQPPVEAPYVAPKPKMTIKTSPD 119

Query: 70  RTIEIFEGMTTLELAKRCGQSVA 2
           +T+EIF+GMT L+L+KR G +++
Sbjct: 120 KTVEIFDGMTLLDLSKRSGATIS 142


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