BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00012393
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAJ44361.1| putative DNA topoisomerase II [Malus x domestica]     135   5e-30
ref|NP_189031.1| DNA topoisomerase 2 [Arabidopsis thaliana] gi|1...   134   8e-30
ref|NP_001118686.1| DNA topoisomerase 2 [Arabidopsis thaliana] g...   134   8e-30
ref|XP_002883470.1| hypothetical protein ARALYDRAFT_898932 [Arab...   131   7e-29
gb|AFW72944.1| DNA topoisomerase 2 [Zea mays]                         130   9e-29

>emb|CAJ44361.1| putative DNA topoisomerase II [Malus x domestica]
          Length = 1467

 Score =  135 bits (339), Expect = 5e-30
 Identities = 60/80 (75%), Positives = 73/80 (91%)
 Frame = +1

Query: 19  LRLYEKVNERWEVCVSLADGHFEQVSFLNNIATIKGGTHVDYITNQIANHIVAVVKKQNK 198
           LRL EKVN+RWE+CVSL+DG F+QVSF+N IATIKGGTHV+Y+T+QI NH++ +V K+NK
Sbjct: 290 LRLTEKVNDRWEICVSLSDGQFQQVSFVNGIATIKGGTHVNYVTDQITNHVMNIVNKKNK 349

Query: 199 HATLKAHNVKNYLWVFVNAL 258
           +A LKAHNVKNYLWVFVNAL
Sbjct: 350 NANLKAHNVKNYLWVFVNAL 369


>ref|NP_189031.1| DNA topoisomerase 2 [Arabidopsis thaliana]
           gi|1174740|sp|P30182.2|TOP2_ARATH RecName: Full=DNA
           topoisomerase 2; AltName: Full=DNA topoisomerase II
           gi|474890|gb|AAA65448.1| topoisomerase II [Arabidopsis
           thaliana] gi|9294657|dbj|BAB03006.1| DNA topoisomerase
           II [Arabidopsis thaliana] gi|332643305|gb|AEE76826.1|
           DNA topoisomerase 2 [Arabidopsis thaliana]
          Length = 1473

 Score =  134 bits (337), Expect = 8e-30
 Identities = 61/79 (77%), Positives = 73/79 (92%)
 Frame = +1

Query: 22  RLYEKVNERWEVCVSLADGHFEQVSFLNNIATIKGGTHVDYITNQIANHIVAVVKKQNKH 201
           RL EKVN+RWEVCVSL++G F+QVSF+N+IATIKGGTHVDY+T+QI NHIVA V K+NK+
Sbjct: 291 RLTEKVNDRWEVCVSLSEGQFQQVSFVNSIATIKGGTHVDYVTSQITNHIVAAVNKKNKN 350

Query: 202 ATLKAHNVKNYLWVFVNAL 258
           A +KAHNVKN+LWVFVNAL
Sbjct: 351 ANVKAHNVKNHLWVFVNAL 369


>ref|NP_001118686.1| DNA topoisomerase 2 [Arabidopsis thaliana]
           gi|332643306|gb|AEE76827.1| DNA topoisomerase 2
           [Arabidopsis thaliana]
          Length = 1438

 Score =  134 bits (337), Expect = 8e-30
 Identities = 61/79 (77%), Positives = 73/79 (92%)
 Frame = +1

Query: 22  RLYEKVNERWEVCVSLADGHFEQVSFLNNIATIKGGTHVDYITNQIANHIVAVVKKQNKH 201
           RL EKVN+RWEVCVSL++G F+QVSF+N+IATIKGGTHVDY+T+QI NHIVA V K+NK+
Sbjct: 291 RLTEKVNDRWEVCVSLSEGQFQQVSFVNSIATIKGGTHVDYVTSQITNHIVAAVNKKNKN 350

Query: 202 ATLKAHNVKNYLWVFVNAL 258
           A +KAHNVKN+LWVFVNAL
Sbjct: 351 ANVKAHNVKNHLWVFVNAL 369


>ref|XP_002883470.1| hypothetical protein ARALYDRAFT_898932 [Arabidopsis lyrata subsp.
           lyrata] gi|297329310|gb|EFH59729.1| hypothetical protein
           ARALYDRAFT_898932 [Arabidopsis lyrata subsp. lyrata]
          Length = 1432

 Score =  131 bits (329), Expect = 7e-29
 Identities = 59/79 (74%), Positives = 73/79 (92%)
 Frame = +1

Query: 22  RLYEKVNERWEVCVSLADGHFEQVSFLNNIATIKGGTHVDYITNQIANHIVAVVKKQNKH 201
           R+ EKVN+RWEVCVSL++G F+QVSF+N+IATIKGGTHVDY+T+QI N+IV VV K+NK+
Sbjct: 289 RITEKVNDRWEVCVSLSEGQFQQVSFVNSIATIKGGTHVDYVTSQITNYIVGVVNKKNKN 348

Query: 202 ATLKAHNVKNYLWVFVNAL 258
           A +KAHNVKN+LWVFVNAL
Sbjct: 349 ANVKAHNVKNHLWVFVNAL 367


>gb|AFW72944.1| DNA topoisomerase 2 [Zea mays]
          Length = 1412

 Score =  130 bits (328), Expect = 9e-29
 Identities = 56/79 (70%), Positives = 73/79 (92%)
 Frame = +1

Query: 22  RLYEKVNERWEVCVSLADGHFEQVSFLNNIATIKGGTHVDYITNQIANHIVAVVKKQNKH 201
           R+YE+VN+RWEVCVS ++G F+QVSF+N IATI+GG+HVDY+TNQIANH+VA+V K+NK+
Sbjct: 281 RIYEQVNDRWEVCVSQSEGQFQQVSFVNRIATIRGGSHVDYVTNQIANHVVAIVNKKNKN 340

Query: 202 ATLKAHNVKNYLWVFVNAL 258
           A +K HNVK++LWVFVNAL
Sbjct: 341 ANMKLHNVKSHLWVFVNAL 359