BLASTX nr result

ID: Atractylodes22_contig00012265 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00012265
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp...   112   4e-23
ref|NP_199616.1| uncharacterized protein [Arabidopsis thaliana] ...   107   1e-21
gb|AAF63108.1|AC006423_9 Hypothetical protein [Arabidopsis thali...    89   4e-16
gb|AAF79692.1|AC022314_33 F9C16.1 [Arabidopsis thaliana]               89   4e-16
ref|NP_174669.1| uncharacterized protein [Arabidopsis thaliana] ...    78   7e-13

>gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1296

 Score =  112 bits (279), Expect = 4e-23
 Identities = 51/97 (52%), Positives = 71/97 (73%), Gaps = 2/97 (2%)
 Frame = +2

Query: 2   FSTHCVGFDVIDHIDDSSPKPTDA--EWKKVDSIVKLWIYGSISQSLLQMVLKKGTTALQ 175
           F THCV F V+ H+D S+    +   EWK+ D  VK+WIYG+IS+S++  VLKK +TA +
Sbjct: 39  FETHCVSFGVLGHLDGSTKSTPEIAKEWKERDGHVKMWIYGTISESIIDTVLKKNSTARE 98

Query: 176 VWTDLETLFRDNKDAKTMQLDNELRNLVMSDLSVHAY 286
           +W  +ETLF DNK+A+ +QL+NELR +V+ DLSVH Y
Sbjct: 99  LWLAIETLFLDNKEARALQLENELRTMVIGDLSVHDY 135


>ref|NP_199616.1| uncharacterized protein [Arabidopsis thaliana]
           gi|10177756|dbj|BAB11069.1| unnamed protein product
           [Arabidopsis thaliana] gi|332008231|gb|AED95614.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 369

 Score =  107 bits (267), Expect = 1e-21
 Identities = 51/97 (52%), Positives = 67/97 (69%), Gaps = 2/97 (2%)
 Frame = +2

Query: 2   FSTHCVGFDVIDHIDDSS-PKP-TDAEWKKVDSIVKLWIYGSISQSLLQMVLKKGTTALQ 175
           F T C+ F V+ HID SS P P T+  WK+ D +VK+WIYG+I+ SLL  ++K G TA  
Sbjct: 40  FETLCLSFGVLGHIDGSSTPTPMTEKRWKERDGLVKMWIYGTITDSLLDTIIKVGCTARD 99

Query: 176 VWTDLETLFRDNKDAKTMQLDNELRNLVMSDLSVHAY 286
           +W  LE LFRDNK+A+ +Q +NELR   + DLSVH Y
Sbjct: 100 LWLSLENLFRDNKEARALQFENELRTTTIDDLSVHEY 136


>gb|AAF63108.1|AC006423_9 Hypothetical protein [Arabidopsis thaliana]
          Length = 474

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 40/97 (41%), Positives = 60/97 (61%), Gaps = 2/97 (2%)
 Frame = +2

Query: 2   FSTHCVGFDVIDHIDDS--SPKPTDAEWKKVDSIVKLWIYGSISQSLLQMVLKKGTTALQ 175
           F THC+ FDV+ HID +       D  W+K D IVKLW+YG+++    Q     G+T+ +
Sbjct: 38  FLTHCLSFDVLGHIDGTLQPANAADVNWQKRDGIVKLWLYGTLTPKQFQGSFVFGSTSRE 97

Query: 176 VWTDLETLFRDNKDAKTMQLDNELRNLVMSDLSVHAY 286
           +W  +E  FR+NKDA+ ++LDNELR   + D+ +  Y
Sbjct: 98  IWLRIENQFRNNKDARALRLDNELRTKEIGDMKIADY 134


>gb|AAF79692.1|AC022314_33 F9C16.1 [Arabidopsis thaliana]
          Length = 820

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 40/97 (41%), Positives = 60/97 (61%), Gaps = 2/97 (2%)
 Frame = +2

Query: 2   FSTHCVGFDVIDHIDDS--SPKPTDAEWKKVDSIVKLWIYGSISQSLLQMVLKKGTTALQ 175
           F THC+ FDV+ HID +       D  W+K D IVKLW+YG+++    Q     G+T+ +
Sbjct: 34  FLTHCLSFDVLGHIDGTLQPANAADVNWQKRDGIVKLWLYGTLTPKQFQGSFVFGSTSRE 93

Query: 176 VWTDLETLFRDNKDAKTMQLDNELRNLVMSDLSVHAY 286
           +W  +E  FR+NKDA+ ++LDNELR   + D+ +  Y
Sbjct: 94  IWLRIENQFRNNKDARALRLDNELRTKEIGDMKIADY 130


>ref|NP_174669.1| uncharacterized protein [Arabidopsis thaliana]
           gi|10086469|gb|AAG12529.1|AC015446_10 Hypothetical
           Protein [Arabidopsis thaliana]
           gi|332193548|gb|AEE31669.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 308

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 37/98 (37%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
 Frame = +2

Query: 2   FSTHCVGFDVIDHIDDS--SPKPTDAEWKKVDSIVKLWIYGSISQSLLQMVLKKGTTALQ 175
           F THC+ FDV+ HID +       D  W+K D IVKL +YG+++    Q      +T+  
Sbjct: 38  FLTHCLSFDVMGHIDGTLLPTNANDVNWQKRDGIVKLSLYGTLTPKQFQGSFVTSSTSRD 97

Query: 176 VWTDLETLFRDNKDAKTMQLDNELRNLVMSDLSVHAYF 289
           +W  ++  FR+NKDA+ ++LD+ELR   + D+ V  Y+
Sbjct: 98  IWLRIKNQFRNNKDARALRLDSELRTKDIGDMRVADYY 135


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