BLASTX nr result

ID: Atractylodes22_contig00012250 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00012250
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30029.3| unnamed protein product [Vitis vinifera]               60   2e-07
ref|NP_187887.3| helicase SWR1 [Arabidopsis thaliana] gi|3098401...    58   9e-07
ref|XP_002882790.1| photoperiod-independent early flowering 1 [A...    56   3e-06

>emb|CBI30029.3| unnamed protein product [Vitis vinifera]
          Length = 1695

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 28/44 (63%), Positives = 37/44 (84%)
 Frame = +3

Query: 3   EEELAKAENDDSVDEIALLQQESEIPIEDLLARYRQNTDSRSTD 134
           EEELAK E++D +DEIALLQ+ESEIP+E+LLARY+++ D    D
Sbjct: 375 EEELAKEESNDPIDEIALLQKESEIPLEELLARYKKDADEDVED 418


>ref|NP_187887.3| helicase SWR1 [Arabidopsis thaliana] gi|30984019|gb|AAP40633.1|
           photoperiod independent early flowering1 [Arabidopsis
           thaliana] gi|332641727|gb|AEE75248.1| helicase SWR1
           [Arabidopsis thaliana]
          Length = 2055

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 29/58 (50%), Positives = 41/58 (70%)
 Frame = +3

Query: 3   EEELAKAENDDSVDEIALLQQESEIPIEDLLARYRQNTDSRSTDSGGSRTPGWLGSDA 176
           EEELAKA+N+D V+EIALLQ+ESE+PIE LLARY+++   +      S +   +  D+
Sbjct: 392 EEELAKADNEDHVEEIALLQKESEMPIEVLLARYKEDFGGKDISEDESESSFAVSEDS 449


>ref|XP_002882790.1| photoperiod-independent early flowering 1 [Arabidopsis lyrata
           subsp. lyrata] gi|297328630|gb|EFH59049.1|
           photoperiod-independent early flowering 1 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 2057

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/37 (70%), Positives = 35/37 (94%)
 Frame = +3

Query: 3   EEELAKAENDDSVDEIALLQQESEIPIEDLLARYRQN 113
           EEELAKA+N+D V+EIALLQ+E+E+PIE LLARY+++
Sbjct: 392 EEELAKADNEDHVEEIALLQKENEMPIEVLLARYKED 428


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