BLASTX nr result

ID: Atractylodes22_contig00012204 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00012204
         (638 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529057.1| multidrug resistance pump, putative [Ricinus...   174   1e-41
ref|XP_003540235.1| PREDICTED: pentatricopeptide repeat-containi...   167   1e-39
ref|XP_003541975.1| PREDICTED: pentatricopeptide repeat-containi...   166   3e-39
gb|AFK46902.1| unknown [Medicago truncatula]                          164   1e-38
ref|XP_002312906.1| predicted protein [Populus trichocarpa] gi|2...   164   1e-38

>ref|XP_002529057.1| multidrug resistance pump, putative [Ricinus communis]
           gi|223531469|gb|EEF33301.1| multidrug resistance pump,
           putative [Ricinus communis]
          Length = 561

 Score =  174 bits (441), Expect = 1e-41
 Identities = 84/159 (52%), Positives = 113/159 (71%)
 Frame = +3

Query: 15  EREKLALSVVNLAIEHDKSTNFTGFQTWLD*HHDVEAIVDGANIAFLQPGSAEDGFSLSI 194
           E E+ A S+  LA+E +   NF+ FQ WLD + D +AIVDGAN+   Q   AE GFS+S 
Sbjct: 283 ETERFAGSLAGLAMEREVKANFSEFQDWLDKNADYDAIVDGANVGLYQQNFAEGGFSISQ 342

Query: 195 LEVVVDLLYDRNKKWPLDILNDRRILALQDNPSNKELLEKWTERGILYGTPSGSDTDWYW 374
           L+ VV  LYDR+ KWPL +L+++R+ A+ +NPS + L+++WTE+ ILY TP GS+ DWYW
Sbjct: 343 LDAVVKELYDRSGKWPLIVLHNKRVRAILENPSQRNLIQEWTEKDILYTTPHGSNDDWYW 402

Query: 375 IYAFVKLKCLIVTNDKMRDHMSKLPDGDRLLPLLKERHQ 491
           +YA VKLKCL+VTND+MRDH+ +L  G       KERHQ
Sbjct: 403 LYAAVKLKCLLVTNDEMRDHIFELL-GSSFFLKWKERHQ 440


>ref|XP_003540235.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Glycine max]
          Length = 530

 Score =  167 bits (424), Expect = 1e-39
 Identities = 84/160 (52%), Positives = 111/160 (69%), Gaps = 1/160 (0%)
 Frame = +3

Query: 15  EREKLALSVVNLAIEHDKSTNFTGFQTWLD*HHDVEAIVDGANIAFLQPGSAEDGFSLSI 194
           EREK A SV  LA E +   NF+ FQ WL+ H   EAIVDGANI   Q   A+ GFS+S 
Sbjct: 281 EREKFAGSVAALAFEREVKANFSEFQAWLEKHASYEAIVDGANIGLYQQNFADGGFSISQ 340

Query: 195 LEVVVDLLYDRN-KKWPLDILNDRRILALQDNPSNKELLEKWTERGILYGTPSGSDTDWY 371
           L+ VV  LY+R+ KKWPL +L+++R+  L +NPS++ L+E+W   G LY TP+GS+ DWY
Sbjct: 341 LDDVVKELYNRSGKKWPLVVLHNKRLRGLMENPSSRRLVEEWMNNGALYTTPNGSNDDWY 400

Query: 372 WIYAFVKLKCLIVTNDKMRDHMSKLPDGDRLLPLLKERHQ 491
           W++A VKL+CL+VTND+MRDH+ +L  G       KERHQ
Sbjct: 401 WLFAAVKLRCLLVTNDEMRDHIFEL-IGSNFFNQWKERHQ 439


>ref|XP_003541975.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Glycine max]
          Length = 550

 Score =  166 bits (420), Expect = 3e-39
 Identities = 82/160 (51%), Positives = 112/160 (70%), Gaps = 1/160 (0%)
 Frame = +3

Query: 15  EREKLALSVVNLAIEHDKSTNFTGFQTWLD*HHDVEAIVDGANIAFLQPGSAEDGFSLSI 194
           E EK A SV  LA E +   NF+ FQ WL+ H   EAIVDGANI   Q   A+ GF++S 
Sbjct: 280 ETEKFAGSVAALAFEREVKANFSEFQAWLEKHASYEAIVDGANIGLYQQNFADGGFNISQ 339

Query: 195 LEVVVDLLYDRN-KKWPLDILNDRRILALQDNPSNKELLEKWTERGILYGTPSGSDTDWY 371
           L+ VV  LY+R+ KKWPL +L+++R+  L +NPS++ L+E+W + G+LY TP+GS+ DWY
Sbjct: 340 LDDVVKELYNRSGKKWPLVVLHNKRLRGLMENPSSRRLVEEWMKNGVLYTTPNGSNDDWY 399

Query: 372 WIYAFVKLKCLIVTNDKMRDHMSKLPDGDRLLPLLKERHQ 491
           W++A VKL+CL+VTND+MRDH+ +L  G       KERHQ
Sbjct: 400 WLFAAVKLRCLLVTNDEMRDHIFEL-IGSNFFNQWKERHQ 438


>gb|AFK46902.1| unknown [Medicago truncatula]
          Length = 392

 Score =  164 bits (415), Expect = 1e-38
 Identities = 80/160 (50%), Positives = 113/160 (70%), Gaps = 1/160 (0%)
 Frame = +3

Query: 15  EREKLALSVVNLAIEHDKSTNFTGFQTWLD*HHDVEAIVDGANIAFLQPGSAEDGFSLSI 194
           E EK A SV  LA+E +   NF+ FQ WL+ H   EAIVDGAN+   Q   A+ GFS + 
Sbjct: 124 EMEKFASSVAALAVEREVKANFSEFQGWLEKHGCYEAIVDGANVGLYQQNFADGGFSTNQ 183

Query: 195 LEVVVDLLYDRN-KKWPLDILNDRRILALQDNPSNKELLEKWTERGILYGTPSGSDTDWY 371
           L+ VV  LY+++ +KWPL +L+++R+  L +NPS+++L+E+W + G+LY TP+GS+ DWY
Sbjct: 184 LDDVVKELYNQSGRKWPLVVLHNKRVKGLMENPSSRKLVEEWMKNGVLYTTPNGSNDDWY 243

Query: 372 WIYAFVKLKCLIVTNDKMRDHMSKLPDGDRLLPLLKERHQ 491
           W+YA VKL+CL+VTND+MRDH+ +L  G       KERHQ
Sbjct: 244 WLYATVKLRCLLVTNDEMRDHIFELL-GSNFFNQWKERHQ 282


>ref|XP_002312906.1| predicted protein [Populus trichocarpa] gi|222849314|gb|EEE86861.1|
           predicted protein [Populus trichocarpa]
          Length = 482

 Score =  164 bits (415), Expect = 1e-38
 Identities = 83/161 (51%), Positives = 114/161 (70%), Gaps = 2/161 (1%)
 Frame = +3

Query: 15  EREKLALSVVNLAIEHDKSTNFTGFQTWLD*HHDVEAIVDGANIAFLQPGSAEDGFSLSI 194
           E E+ A SV  LA++ +   NF+ FQ WL+ H + EAIVDGANI   Q   AE GFS+S 
Sbjct: 273 ETERFAESVAGLAMQREVKANFSEFQNWLEEHANYEAIVDGANIGLYQQNFAEGGFSISQ 332

Query: 195 -LEVVVDLLYDRN-KKWPLDILNDRRILALQDNPSNKELLEKWTERGILYGTPSGSDTDW 368
            L+ VV  LY+++ KKWPL I++++R+ AL  NPS +EL+++W E+ +LY TP GS+ DW
Sbjct: 333 QLDAVVKDLYNQSGKKWPLIIMHNKRLRALLQNPSTRELIQEWIEKDVLYTTPQGSNDDW 392

Query: 369 YWIYAFVKLKCLIVTNDKMRDHMSKLPDGDRLLPLLKERHQ 491
           YW+YA VKL+CL+VTND+MRDH+ +L   D  +   KERHQ
Sbjct: 393 YWLYAAVKLRCLLVTNDEMRDHIFELLGSDFFIK-WKERHQ 432


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