BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00012130
         (1899 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267010.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   669   0.0  
emb|CBI18448.3| unnamed protein product [Vitis vinifera]              660   0.0  
ref|XP_002526838.1| ribosomal pseudouridine synthase, putative [...   657   0.0  
ref|XP_003549365.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   640   0.0  
ref|NP_178012.2| RNA pseudourine synthase 3 [Arabidopsis thalian...   624   e-176

>ref|XP_002267010.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Vitis
            vinifera]
          Length = 479

 Score =  669 bits (1726), Expect = 0.0
 Identities = 336/480 (70%), Positives = 388/480 (80%), Gaps = 15/480 (3%)
 Frame = -1

Query: 1419 MWLNTSLRQCMPF--TVRHFSRVSPPPPDCGESVLRVSNNITHLGCRKAGYKPRQLLSLP 1246
            MW N  L +C      VRH+SR++PP P     V+RVSNN+  LG  K G KPRQLLSLP
Sbjct: 1    MWKNV-LHECQGLFPVVRHYSRIAPPRPASAAPVIRVSNNVAQLGSPKEGPKPRQLLSLP 59

Query: 1245 QFPSHPLPGKNVPPGS----HITAISWLKYYFADVAGSVIQSHFNKGLVKMECHNAG--- 1087
             FP+HPLPGK++   S    H+TAISW+KYYF ++ GSV+QSHFNKGLV ME  N     
Sbjct: 60   PFPAHPLPGKSLVNVSGLPTHVTAISWIKYYFDEIPGSVVQSHFNKGLVHMERSNLDDSS 119

Query: 1086 --KQGQTK-LVKIKHNEVMKTGSTIYVPVSVAESKISKRFDTIPSGSLCPNADEIEYLQR 916
              K+GQ K L KIK NEVM+ G+ IYVPVSVAE++ISKRFDTIPSG+L PNADEIEYLQR
Sbjct: 120  LEKEGQIKPLRKIKPNEVMEAGTRIYVPVSVAEARISKRFDTIPSGTLHPNADEIEYLQR 179

Query: 915  LVMYKDSALLVLNKPPKVPVKGNLAVHNSMDXXXXXXLCYDYDEGPKLVHRLDRESSGIL 736
            LV YKD A+LVLNKPPKVP+KGNL VHNSMD      L +DY+EGPKLVHRLDRESSG+L
Sbjct: 180  LVTYKDPAILVLNKPPKVPLKGNLPVHNSMDALAAAALTFDYEEGPKLVHRLDRESSGLL 239

Query: 735  LMGRSKESISHLHWLFSDANKTKSSLKAWNDACEATYQRFWALVIGTPKEKEGLICAPLT 556
            LMGR+KES++HLHWLFSD NK KS  KAW+DACEAT QR+WALVIG+PK+KEG+I APL+
Sbjct: 240  LMGRTKESVAHLHWLFSDINKAKSLSKAWDDACEATCQRYWALVIGSPKQKEGVIHAPLS 299

Query: 555  KVLLNGGKTERVMLAYGSGLEASQEAVTEYRVLGPTISGCSWLELRPLTNHKHQMRVHCA 376
            KVLL+ GKTERV+LA  SGLEASQEA+TEYRVLGP I+GCSW+EL P T+ KHQ+RVHCA
Sbjct: 300  KVLLDDGKTERVILANQSGLEASQEAITEYRVLGPMINGCSWIELCPRTSRKHQLRVHCA 359

Query: 375  EALGTPIVGDYKYGWFVHSRWKQMPRADFEPTTGEPYKMRRPDGLAIQKGSVLSKVPLLH 196
            EALGTPIVGDYKYGWFVH RWKQMPR D EPTTG+PYKMRRP+GL +QKGSVLSKVPLLH
Sbjct: 360  EALGTPIVGDYKYGWFVHRRWKQMPRVDLEPTTGKPYKMRRPEGLDVQKGSVLSKVPLLH 419

Query: 195  LHCREVVIPNVAKRLEV---QXXXXXXXXXXKLKPDVLRFVASMPSHMKISWNLMSSYLV 25
            LHCRE+++PN+AK L +   +           LKPD+LRFVASMP+HMKISWNLMSSYLV
Sbjct: 420  LHCRELILPNIAKFLPILDPKPKNQNQYPKLSLKPDILRFVASMPNHMKISWNLMSSYLV 479


>emb|CBI18448.3| unnamed protein product [Vitis vinifera]
          Length = 481

 Score =  660 bits (1702), Expect = 0.0
 Identities = 333/482 (69%), Positives = 388/482 (80%), Gaps = 17/482 (3%)
 Frame = -1

Query: 1419 MWLNTSLRQCMPF--TVRHFSRVSPPPPDCGESVLRVSNNITHLGCRKAGYKPRQLLSLP 1246
            MW N  L +C      VRH+SR++PP P     V+RVSNN+  LG  K G KPRQLLSLP
Sbjct: 1    MWKNV-LHECQGLFPVVRHYSRIAPPRPASAAPVIRVSNNVAQLGSPKEGPKPRQLLSLP 59

Query: 1245 QFPSHPLPGKNVPPGS----HITAISWLKYYFADVAGSVIQSHFNKGLVKMECHNAG--- 1087
             FP+HPLPGK++   S    H+TAISW+KYYF ++ GSV+QSHFNKGLV ME  N     
Sbjct: 60   PFPAHPLPGKSLVNVSGLPTHVTAISWIKYYFDEIPGSVVQSHFNKGLVHMERSNLDDSS 119

Query: 1086 --KQGQTK-LVKIKHNEVMKTGSTIYVPVSVAESKISKRFDTIPSGSLCPNADEIEYLQR 916
              K+GQ K L KIK NEVM+ G+ IYVPVSVAE++ISKRFDTIPSG+L PNADEIEYLQR
Sbjct: 120  LEKEGQIKPLRKIKPNEVMEAGTRIYVPVSVAEARISKRFDTIPSGTLHPNADEIEYLQR 179

Query: 915  L--VMYKDSALLVLNKPPKVPVKGNLAVHNSMDXXXXXXLCYDYDEGPKLVHRLDRESSG 742
            L  + ++D A+LVLNKPPKVP+KGNL VHNSMD      L +DY+EGPKLVHRLDRESSG
Sbjct: 180  LWLLKFQDPAILVLNKPPKVPLKGNLPVHNSMDALAAAALTFDYEEGPKLVHRLDRESSG 239

Query: 741  ILLMGRSKESISHLHWLFSDANKTKSSLKAWNDACEATYQRFWALVIGTPKEKEGLICAP 562
            +LLMGR+KES++HLHWLFSD NK KS  KAW+DACEAT QR+WALVIG+PK+KEG+I AP
Sbjct: 240  LLLMGRTKESVAHLHWLFSDINKAKSLSKAWDDACEATCQRYWALVIGSPKQKEGVIHAP 299

Query: 561  LTKVLLNGGKTERVMLAYGSGLEASQEAVTEYRVLGPTISGCSWLELRPLTNHKHQMRVH 382
            L+KVLL+ GKTERV+LA  SGLEASQEA+TEYRVLGP I+GCSW+EL P T+ KHQ+RVH
Sbjct: 300  LSKVLLDDGKTERVILANQSGLEASQEAITEYRVLGPMINGCSWIELCPRTSRKHQLRVH 359

Query: 381  CAEALGTPIVGDYKYGWFVHSRWKQMPRADFEPTTGEPYKMRRPDGLAIQKGSVLSKVPL 202
            CAEALGTPIVGDYKYGWFVH RWKQMPR D EPTTG+PYKMRRP+GL +QKGSVLSKVPL
Sbjct: 360  CAEALGTPIVGDYKYGWFVHRRWKQMPRVDLEPTTGKPYKMRRPEGLDVQKGSVLSKVPL 419

Query: 201  LHLHCREVVIPNVAKRLEV---QXXXXXXXXXXKLKPDVLRFVASMPSHMKISWNLMSSY 31
            LHLHCRE+++PN+AK L +   +           LKPD+LRFVASMP+HMKISWNLMSSY
Sbjct: 420  LHLHCRELILPNIAKFLPILDPKPKNQNQYPKLSLKPDILRFVASMPNHMKISWNLMSSY 479

Query: 30   LV 25
            LV
Sbjct: 480  LV 481


>ref|XP_002526838.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
            gi|223533842|gb|EEF35573.1| ribosomal pseudouridine
            synthase, putative [Ricinus communis]
          Length = 468

 Score =  657 bits (1696), Expect = 0.0
 Identities = 326/470 (69%), Positives = 375/470 (79%), Gaps = 5/470 (1%)
 Frame = -1

Query: 1419 MWLNTSLRQCMPFTVRHFSRVSPPPPDCGESVLRVSNNITHLGCRKAGYKPRQLLSLPQF 1240
            MW N   R+ +    R +SR++PPPP     V+RVSNN+ HLG  K G KPRQLLSLP F
Sbjct: 1    MWKNIYCRRVVS-QGRSYSRIAPPPPAYANPVIRVSNNVAHLGSPKDGPKPRQLLSLPPF 59

Query: 1239 PSHPLPGKNVPPGSHITAISWLKYYFADVAGSVIQSHFNKGLVKMECHNAGKQ----GQT 1072
            P  PLPG+N    SH+TAISW+KYYF ++  S IQSHFNKGL  +EC N        GQ 
Sbjct: 60   PGLPLPGRN-SMASHVTAISWVKYYFDEILDSAIQSHFNKGLAHIECPNGSGSIEYGGQM 118

Query: 1071 KLVKIKHNEVMKTGSTIYVPVSVAESKISKRFDTIPSGSLCPNADEIEYLQRLVMYKDSA 892
             L KIKHN++M+ G+ ++V VSVAE++ISKRFDTIPSG+L PNADEI+YLQRLV YKDSA
Sbjct: 119  SLRKIKHNDIMEAGARVHVAVSVAETRISKRFDTIPSGTLYPNADEIQYLQRLVKYKDSA 178

Query: 891  LLVLNKPPKVPVKGNLAVHNSMDXXXXXXLCYDYDEGPKLVHRLDRESSGILLMGRSKES 712
            ++VLNKPP++PVKGNL +HNSMD      L YDYDEGPKLV RLDRESSG+LLMGR+KES
Sbjct: 179  IIVLNKPPRLPVKGNLPLHNSMDALAAAALSYDYDEGPKLVQRLDRESSGLLLMGRTKES 238

Query: 711  ISHLHWLFSDANKTKSSLKAWNDACEATYQRFWALVIGTPKEKEGLICAPLTKVLLNGGK 532
            I HL WLFSD NK+ S  KAWNDAC+ATYQR+WALVIG+PKEKEGLI APL+KVLLN GK
Sbjct: 239  IDHLQWLFSDVNKSNSRCKAWNDACKATYQRYWALVIGSPKEKEGLIRAPLSKVLLNDGK 298

Query: 531  TERVMLAYGSGLEASQEAVTEYRVLGPTISGCSWLELRPLTNHKHQMRVHCAEALGTPIV 352
            TERV+LA  SGLEASQEA+TEYRVLGP I+GCSW+ELRPLT+ KHQ+RVHCAEALGTPIV
Sbjct: 299  TERVVLAQHSGLEASQEALTEYRVLGPRINGCSWIELRPLTSRKHQLRVHCAEALGTPIV 358

Query: 351  GDYKYGWFVHSRWKQMPRADFEPTTGEPYKMRRPDGLAIQKGSVLSKVPLLHLHCREVVI 172
            GDYKYGW VH RWKQMPR D EP +G+PYK+RRP GL +QKGSVLSKVPLLHLHCRE V+
Sbjct: 359  GDYKYGWCVHQRWKQMPRVDIEPFSGKPYKLRRPAGLDVQKGSVLSKVPLLHLHCREFVL 418

Query: 171  PNVAKRLEV-QXXXXXXXXXXKLKPDVLRFVASMPSHMKISWNLMSSYLV 25
            PN+AK L V              KPD+LRFVASMP+HMKISWNLMSSYLV
Sbjct: 419  PNIAKFLAVLNEKSENIHPALDAKPDLLRFVASMPTHMKISWNLMSSYLV 468


>ref|XP_003549365.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Glycine
            max]
          Length = 554

 Score =  640 bits (1650), Expect = 0.0
 Identities = 312/461 (67%), Positives = 372/461 (80%), Gaps = 8/461 (1%)
 Frame = -1

Query: 1383 FTVRHFSRVSPPPPDCGESVLRVSNNITHLGCRKAGYKPRQLLSLPQFPSHPLPGKNVPP 1204
            F  RH+SR+ PP P   E V+ VSNNI  L   K G KPRQLLSLP FP HPLP K+   
Sbjct: 94   FVARHYSRIQPPRPVSVEPVISVSNNIARLDAPKEGPKPRQLLSLPPFPGHPLPDKSSIS 153

Query: 1203 GS----HITAISWLKYYFADVAGSVIQSHFNKGLVKMECHNAGKQGQTKLV---KIKHNE 1045
            GS    ++TA++W+KYYF    GSVI+SHF +GLV+ME  ++  Q + ++    KI+ NE
Sbjct: 154  GSRQRDYVTAVNWIKYYFKGTWGSVIESHFREGLVQMEADDSSTQKEEQMKPMRKIRPNE 213

Query: 1044 VMKTGSTIYVPVSVAESKISKRFDTIPSGSLCPNADEIEYLQRLVMYKDSALLVLNKPPK 865
            VMK G+ ++VPVS+ E++ISKR+D IPSG+L PNADEI+YLQRLV+YKDSA++VLNKPPK
Sbjct: 214  VMKRGARVHVPVSICETRISKRYDAIPSGTLYPNADEIKYLQRLVIYKDSAIIVLNKPPK 273

Query: 864  VPVKGNLAVHNSMDXXXXXXLCYDYDEGPKLVHRLDRESSGILLMGRSKESISHLHWLFS 685
            +PVKG+L VHNSMD      L YDYDEGPKLVHRLDRESSGILL+GR+K+S+SHL WLFS
Sbjct: 274  LPVKGSLPVHNSMDALAAAALSYDYDEGPKLVHRLDRESSGILLLGRTKDSVSHLQWLFS 333

Query: 684  DANKTKSSLKAWNDACEATYQRFWALVIGTPKEKEGLICAPLTKVLLNGGKTERVMLAYG 505
            + N  KSS K WN+ACEATYQR+WALVIGTPKEKEG+I APL+KVLLN GKTER++LA+ 
Sbjct: 334  NINNAKSSCKDWNEACEATYQRYWALVIGTPKEKEGIIHAPLSKVLLNDGKTERIILAHH 393

Query: 504  SGLEASQEAVTEYRVLGPTISGCSWLELRPLTNHKHQMRVHCAEALGTPIVGDYKYGWFV 325
            S +E  QEAVTEYRVLGP I+GCSW+ELRPLT  KHQ+RVHCAEALGTPIVGDYKYGWFV
Sbjct: 394  SSVEPRQEAVTEYRVLGPQINGCSWVELRPLTYRKHQLRVHCAEALGTPIVGDYKYGWFV 453

Query: 324  HSRWKQMPRADFEPTTGEPYKMRRPDGLAIQKGSVLSKVPLLHLHCREVVIPNVAKRLEV 145
            HSRWKQMPR D EPTTG+PYK+RRP+GL +QKGSVLSKVPLLHLHCRE+V+PN+ K + V
Sbjct: 454  HSRWKQMPRVDIEPTTGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIVKFMHV 513

Query: 144  -QXXXXXXXXXXKLKPDVLRFVASMPSHMKISWNLMSSYLV 25
                        + +PDVLRFVA+MPSHM+ISWNLMSSYLV
Sbjct: 514  LNNSSEELRTSLREQPDVLRFVATMPSHMRISWNLMSSYLV 554


>ref|NP_178012.2| RNA pseudourine synthase 3 [Arabidopsis thaliana]
            gi|75110951|sp|Q5XET6.1|PUS3_ARATH RecName: Full=RNA
            pseudourine synthase 3, mitochondrial; AltName: Full=RNA
            pseudouridylate synthase 3; AltName: Full=RNA-uridine
            isomerase 3; Flags: Precursor gi|53850479|gb|AAU95416.1|
            At1g78910 [Arabidopsis thaliana]
            gi|56790228|gb|AAW30031.1| At1g78910 [Arabidopsis
            thaliana] gi|332198052|gb|AEE36173.1| RNA pseudourine
            synthase 3 [Arabidopsis thaliana]
          Length = 478

 Score =  624 bits (1610), Expect = e-176
 Identities = 310/482 (64%), Positives = 372/482 (77%), Gaps = 17/482 (3%)
 Frame = -1

Query: 1419 MW-LNTSLRQC-MPFTVRHFSRVSPPPPDCGESVLRVSNNITHLGCRKAGYKPRQLLSLP 1246
            MW   T  RQ  +   +R +SRV+PPP     SV+RV+NN+ HLG  K G  PRQL+SLP
Sbjct: 1    MWKAKTCFRQIYLTVLIRRYSRVAPPP----SSVIRVTNNVAHLGPPKQGPLPRQLISLP 56

Query: 1245 QFPSHPLPGKNV-------PPGSHITAISWLKYYFADVAGSVIQSHFNKGLVKME----- 1102
             FP HPLPGKN          G H+TAISW+KYYF ++    IQ+HF KGLV+ME     
Sbjct: 57   PFPGHPLPGKNAGADGDDGDSGGHVTAISWVKYYFEEIYDKAIQTHFTKGLVQMEFRGRR 116

Query: 1101 -CHNAGKQGQTKLVKIKHNEVMKTGSTIYVPVSVAESKISKRFDTIPSGSLCPNADEIEY 925
                  + G   + KIKHNEVM+ G  I++PVS+AE +ISKR+DTIPSG+L PNADEI Y
Sbjct: 117  DASREKEDGAIPMRKIKHNEVMQIGDKIWLPVSIAEMRISKRYDTIPSGTLYPNADEIAY 176

Query: 924  LQRLVMYKDSALLVLNKPPKVPVKGNLAVHNSMDXXXXXXLCYDYDEGPKLVHRLDRESS 745
            LQRLV +KDSA++VLNKPPK+PVKGN+ +HNSMD      L +  DEGP+LVHRLDRE+S
Sbjct: 177  LQRLVRFKDSAIIVLNKPPKLPVKGNVPIHNSMDALAAAALSFGNDEGPRLVHRLDRETS 236

Query: 744  GILLMGRSKESISHLHWLFSDANKTKSSLKAWNDACEATYQRFWALVIGTPKEKEGLICA 565
            G+L+MGR+KESI +LH +FSD     SS KAWN ACEA YQ++WALVIG+PKEKEGLI A
Sbjct: 237  GLLVMGRTKESIDYLHSVFSDYKGRNSSCKAWNKACEAMYQQYWALVIGSPKEKEGLISA 296

Query: 564  PLTKVLLNGGKTERVMLAYGSGLEASQEAVTEYRVLGPTISGCSWLELRPLTNHKHQMRV 385
            PL+KVLL+ GKT+RV+LA GSG EASQ+A+TEY+VLGP I+GCSW+ELRP+T+ KHQ+RV
Sbjct: 297  PLSKVLLDDGKTDRVVLAQGSGFEASQDAITEYKVLGPKINGCSWVELRPITSRKHQLRV 356

Query: 384  HCAEALGTPIVGDYKYGWFVHSRWKQMPRADFEPTTGEPYKMRRPDGLAIQKGSVLSKVP 205
            HCAEALGTPIVGDYKYGWFVH RWKQMP+ D EPTTG+PYK+RRP+GL +QKGSVLSKVP
Sbjct: 357  HCAEALGTPIVGDYKYGWFVHKRWKQMPQVDIEPTTGKPYKLRRPEGLDVQKGSVLSKVP 416

Query: 204  LLHLHCREVVIPNVAKRLEVQXXXXXXXXXXKL--KPDVLRFVASMPSHMKISWNLMSSY 31
            LLHLHCRE+V+PN+AK L V            +  KPD+LRFVASMPSHMKISWNLMSSY
Sbjct: 417  LLHLHCREMVLPNIAKFLHVMNQQETEPLHTGIIDKPDLLRFVASMPSHMKISWNLMSSY 476

Query: 30   LV 25
            LV
Sbjct: 477  LV 478