BLASTX nr result

ID: Atractylodes22_contig00012116 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00012116
         (747 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532972.1| RNA-binding protein, putative [Ricinus commu...    38   7e-06

>ref|XP_002532972.1| RNA-binding protein, putative [Ricinus communis]
           gi|223527250|gb|EEF29409.1| RNA-binding protein,
           putative [Ricinus communis]
          Length = 962

 Score = 38.1 bits (87), Expect(2) = 7e-06
 Identities = 15/15 (100%), Positives = 15/15 (100%)
 Frame = -2

Query: 236 ICGCVNFARRTSCFQ 192
           ICGCVNFARRTSCFQ
Sbjct: 300 ICGCVNFARRTSCFQ 314



 Score = 37.7 bits (86), Expect(2) = 7e-06
 Identities = 16/29 (55%), Positives = 23/29 (79%)
 Frame = -3

Query: 316 SSKPTGVAGGPYFGSDASLRLGHKNHKYV 230
           SSKPTG AGGP FG +++++ GH NH+ +
Sbjct: 263 SSKPTGGAGGP-FGQESAMKSGHLNHRSI 290


Top