BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00012026
         (1064 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI14894.3| unnamed protein product [Vitis vinifera]               82   9e-15
ref|XP_002275673.1| PREDICTED: pentatricopeptide repeat-containi...    82   9e-15
ref|XP_004152584.1| PREDICTED: pentatricopeptide repeat-containi...    84   5e-14
ref|XP_003560189.1| PREDICTED: pentatricopeptide repeat-containi...    70   3e-12
ref|NP_199839.1| pentatricopeptide repeat-containing protein [Ar...    71   1e-11

>emb|CBI14894.3| unnamed protein product [Vitis vinifera]
          Length = 746

 Score = 82.0 bits (201), Expect(2) = 9e-15
 Identities = 46/87 (52%), Positives = 64/87 (73%), Gaps = 7/87 (8%)
 Frame = -2

Query: 358 NHVTRSIIITSMRRMGNSAK*ALDVFETLNMRGLKWSLEVMIALMKSFCDEGLK------ 197
           +HVT SI+IT MR+ G+SAK A + F+ +N +G+KWSLEV+ AL+KSFCDEGLK      
Sbjct: 276 DHVTCSIMITVMRKDGHSAKDAWEFFQRMNRKGVKWSLEVLGALIKSFCDEGLKNEALII 335

Query: 196 -KEMEKKGIASNISYLLSSSQEAPSKT 119
             EMEKKGI+SN + + ++  +A SK+
Sbjct: 336 QSEMEKKGISSN-AIVYNTLMDAYSKS 361



 Score = 25.0 bits (53), Expect(2) = 9e-15
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -3

Query: 411 YDDAWILFDMMEK*NV 364
           YDDAW ++D ME  N+
Sbjct: 258 YDDAWKVYDEMETNNI 273


>ref|XP_002275673.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
           chloroplastic [Vitis vinifera]
           gi|147821419|emb|CAN76897.1| hypothetical protein
           VITISV_010606 [Vitis vinifera]
          Length = 692

 Score = 82.0 bits (201), Expect(2) = 9e-15
 Identities = 46/87 (52%), Positives = 64/87 (73%), Gaps = 7/87 (8%)
 Frame = -2

Query: 358 NHVTRSIIITSMRRMGNSAK*ALDVFETLNMRGLKWSLEVMIALMKSFCDEGLK------ 197
           +HVT SI+IT MR+ G+SAK A + F+ +N +G+KWSLEV+ AL+KSFCDEGLK      
Sbjct: 276 DHVTCSIMITVMRKDGHSAKDAWEFFQRMNRKGVKWSLEVLGALIKSFCDEGLKNEALII 335

Query: 196 -KEMEKKGIASNISYLLSSSQEAPSKT 119
             EMEKKGI+SN + + ++  +A SK+
Sbjct: 336 QSEMEKKGISSN-AIVYNTLMDAYSKS 361



 Score = 25.0 bits (53), Expect(2) = 9e-15
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -3

Query: 411 YDDAWILFDMMEK*NV 364
           YDDAW ++D ME  N+
Sbjct: 258 YDDAWKVYDEMETNNI 273


>ref|XP_004152584.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
           chloroplastic-like [Cucumis sativus]
          Length = 708

 Score = 84.3 bits (207), Expect = 5e-14
 Identities = 43/73 (58%), Positives = 55/73 (75%), Gaps = 7/73 (9%)
 Frame = -2

Query: 358 NHVTRSIIITSMRRMGNSAK*ALDVFETLNMRGLKWSLEVMIALMKSFCDEGLKK----- 194
           +HVT SI+IT MR++G SAK + D FE +N +G+KWS EV+ AL+KSFCDEGLK      
Sbjct: 292 DHVTCSIMITVMRKIGRSAKDSWDYFEKMNQKGVKWSSEVLGALIKSFCDEGLKSQALIL 351

Query: 193 --EMEKKGIASNI 161
             EMEKKG+ASN+
Sbjct: 352 QLEMEKKGVASNV 364


>ref|XP_003560189.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
           chloroplastic-like [Brachypodium distachyon]
          Length = 737

 Score = 70.5 bits (171), Expect(2) = 3e-12
 Identities = 35/74 (47%), Positives = 51/74 (68%), Gaps = 7/74 (9%)
 Frame = -2

Query: 358 NHVTRSIIITSMRRMGNSAK*ALDVFETLNMRGLKWSLEVMIALMKSFCDEGLKK----- 194
           +H+T SI++  M++   SAK A + F+ +N +G+KWSL+V  +L+K FCDEGLKK     
Sbjct: 317 DHITSSIMLNVMKKQKVSAKAAWEFFQRMNRKGVKWSLDVSASLIKMFCDEGLKKEALII 376

Query: 193 --EMEKKGIASNIS 158
             EME++GI SN S
Sbjct: 377 QSEMERRGIPSNTS 390



 Score = 28.1 bits (61), Expect(2) = 3e-12
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = -3

Query: 411 YDDAWILFDMMEK*NVE 361
           YDDAW +F+ MEK +V+
Sbjct: 299 YDDAWTIFEFMEKNSVQ 315


>ref|NP_199839.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75170477|sp|Q9FGR7.1|PP426_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g50280, chloroplastic; AltName: Full=Protein EMBRYO
           DEFECTIVE 1006; Flags: Precursor
           gi|9759030|dbj|BAB09399.1| unnamed protein product
           [Arabidopsis thaliana] gi|332008538|gb|AED95921.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 723

 Score = 71.2 bits (173), Expect(2) = 1e-11
 Identities = 36/72 (50%), Positives = 52/72 (72%), Gaps = 7/72 (9%)
 Frame = -2

Query: 358 NHVTRSIIITSMRRMGNSAK*ALDVFETLNMRGLKWSLEVMIALMKSFCDEGLKK----- 194
           ++VT +I+IT++R+ G SAK   ++FE ++ +G+KWS +V   L+KSFCDEGLK+     
Sbjct: 307 DNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVI 366

Query: 193 --EMEKKGIASN 164
             EMEKKGI SN
Sbjct: 367 QTEMEKKGIRSN 378



 Score = 25.4 bits (54), Expect(2) = 1e-11
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = -3

Query: 411 YDDAWILFDMMEK*NV 364
           YDDAW +++ M+K NV
Sbjct: 289 YDDAWEVYEAMDKINV 304