BLASTX nr result

ID: Atractylodes22_contig00012018 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00012018
         (1041 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269136.1| PREDICTED: pentatricopeptide repeat-containi...   270   4e-70
emb|CAN76479.1| hypothetical protein VITISV_028175 [Vitis vinifera]   256   5e-66
ref|XP_002532584.1| pentatricopeptide repeat-containing protein,...   239   8e-61
ref|XP_004172369.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   214   2e-53
ref|XP_004144802.1| PREDICTED: pentatricopeptide repeat-containi...   214   2e-53

>ref|XP_002269136.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71210-like
            [Vitis vinifera]
          Length = 881

 Score =  270 bits (690), Expect = 4e-70
 Identities = 138/240 (57%), Positives = 180/240 (75%), Gaps = 2/240 (0%)
 Frame = -3

Query: 1039 KSEKISDALRLFFDILKRRKIGRKVCNVVVIGLCKANKPDMALVIFSAIREKVKTVRPSL 860
            K+E+ISDAL  F D+ KRRK+GRK+CN +V+GLCKANK D+AL I   IREK   V PSL
Sbjct: 645  KNERISDALNFFSDLQKRRKVGRKLCNTMVVGLCKANKVDIALEILKEIREK--GVTPSL 702

Query: 859  HCYEELIFVLCRHKRYDKVMDLIDDLIQVGRPVSSFIGNTLLLHSLKDHELYNSWVDLRP 680
             CYEEL+ VLC +KRYD V++LIDDL +VGR VSSFIGN LLLHSLK  EL+ +WV  + 
Sbjct: 703  ECYEELVKVLCTNKRYDVVVNLIDDLERVGRHVSSFIGNVLLLHSLKTPELFETWVHAKD 762

Query: 679  P--DETSPVWRLGELVGLFSNRFRDDIDTDDLEEVVGNCFPLDIYTYNMMVRKLSIKQVD 506
               + +SP   LG+L+G FS     + D + LEEV+  CFPLD+YTYNM++R+L+   +D
Sbjct: 763  AHNEISSPNLILGQLIGEFSGCIGVNQDFNYLEEVMQQCFPLDLYTYNMLLRRLTRSDMD 822

Query: 505  DAFQLFLKICQKGRPKPNQWTYETLVHGFYRHGRTADAKVWVEEMLRRGFVPSEATKVLL 326
             A +LF +ICQKG  +PN+WTY+ LVHG ++HGRT++A  WVEEM  +GF P+EATK+L+
Sbjct: 823  LALELFNRICQKGY-EPNRWTYDILVHGLFKHGRTSEANKWVEEMFCKGFEPTEATKLLI 881


>emb|CAN76479.1| hypothetical protein VITISV_028175 [Vitis vinifera]
          Length = 1173

 Score =  256 bits (655), Expect = 5e-66
 Identities = 131/229 (57%), Positives = 171/229 (74%), Gaps = 2/229 (0%)
 Frame = -3

Query: 1039 KSEKISDALRLFFDILKRRKIGRKVCNVVVIGLCKANKPDMALVIFSAIREKVKTVRPSL 860
            K+E+ISDAL  F D+ KRRK+GRK+CN +V+GLCKANK D+AL I   IREK   V PSL
Sbjct: 645  KNERISDALNFFSDLQKRRKVGRKLCNTMVVGLCKANKVDIALEILKEIREK--GVTPSL 702

Query: 859  HCYEELIFVLCRHKRYDKVMDLIDDLIQVGRPVSSFIGNTLLLHSLKDHELYNSWVDLRP 680
             CYEEL+ VLC++KRYD V++LIDDL +VGR VSSFIGN LLLHSLK  EL+ +WV  + 
Sbjct: 703  ECYEELVKVLCKNKRYDVVVNLIDDLERVGRHVSSFIGNVLLLHSLKTPELFETWVHAKD 762

Query: 679  P--DETSPVWRLGELVGLFSNRFRDDIDTDDLEEVVGNCFPLDIYTYNMMVRKLSIKQVD 506
               + +SP   LG+L+G FS     + D + LEEV+  CFPLD+YTYNM++R+L+   +D
Sbjct: 763  AHNEISSPNLILGQLIGEFSGCIGVNQDFNYLEEVMQQCFPLDLYTYNMLLRRLTRSDMD 822

Query: 505  DAFQLFLKICQKGRPKPNQWTYETLVHGFYRHGRTADAKVWVEEMLRRG 359
             A +LF +ICQKG  +PN+WTY+ LVHG ++HGRT++A  WVEEM  +G
Sbjct: 823  LALELFNRICQKGY-EPNRWTYDILVHGLFKHGRTSEANKWVEEMFCKG 870


>ref|XP_002532584.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223527693|gb|EEF29801.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 895

 Score =  239 bits (610), Expect = 8e-61
 Identities = 123/240 (51%), Positives = 168/240 (70%), Gaps = 2/240 (0%)
 Frame = -3

Query: 1039 KSEKISDALRLFFDILKRRKIGRKVCNVVVIGLCKANKPDMALVIFSAIREKVKTVRPSL 860
            KSE+ISDAL  F  + +RRKIGRK+ N +V+GLCK NK D AL  F  ++       PS+
Sbjct: 659  KSERISDALNFFDAVGQRRKIGRKLYNTMVVGLCKVNKVDSALSFFLEMQSNGMV--PSV 716

Query: 859  HCYEELIFVLCRHKRYDKVMDLIDDLIQVGRPVSSFIGNTLLLHSLKDHELYNSWVDLRP 680
             CYE LI +LC +KRY   + LI DL + GR V+SFIGN LLLHSLK  ELY++W+ +R 
Sbjct: 717  ECYEVLIMLLCSNKRYSTAITLITDLEKFGRRVTSFIGNILLLHSLKSDELYDAWLQVRE 776

Query: 679  -PDETS-PVWRLGELVGLFSNRFRDDIDTDDLEEVVGNCFPLDIYTYNMMVRKLSIKQVD 506
              +ETS  +  LG+++G F+ R +     D+LEEV+  CFPLD+YTYNM++R+LS+  +D
Sbjct: 777  VQNETSLNLLILGQIIGAFAGRLKLSQQIDNLEEVIEQCFPLDLYTYNMLMRRLSMSNID 836

Query: 505  DAFQLFLKICQKGRPKPNQWTYETLVHGFYRHGRTADAKVWVEEMLRRGFVPSEATKVLL 326
             A +LF +ICQKG  +PN WTY+ LVHG +++GR  +A+ WV+EM R+GF PS  TK L+
Sbjct: 837  HARELFDRICQKGY-EPNHWTYDILVHGLFKNGRIGEARRWVDEMFRKGFSPSGRTKSLM 895


>ref|XP_004172369.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At1g71210-like, partial [Cucumis sativus]
          Length = 889

 Score =  214 bits (546), Expect = 2e-53
 Identities = 111/238 (46%), Positives = 160/238 (67%), Gaps = 1/238 (0%)
 Frame = -3

Query: 1036 SEKISDALRLFFDILKRRKIGRKVCNVVVIGLCKANKPDMALVIFSAIREKVKTVRPSLH 857
            SE+ISDAL    ++ + R IGRK+ NVVV+GLCKANK ++A   +  +R+K     PS+ 
Sbjct: 646  SERISDALIFLSNLSQTRTIGRKISNVVVVGLCKANKTNLAFDFWKHLRDKGTV--PSIE 703

Query: 856  CYEELIFVLCRHKRYDKVMDLIDDLIQVGRPVSSFIGNTLLLHSLKDHELYNSWVDLRPP 677
            CYEEL    C+++RYD V++L++DL +VGRP++SF+GN LL  SLK  +LY +WV+ R  
Sbjct: 704  CYEELAKHFCQNERYDAVVNLLNDLDKVGRPLTSFLGNVLLYSSLKTQKLYKAWVNSRVG 763

Query: 676  D-ETSPVWRLGELVGLFSNRFRDDIDTDDLEEVVGNCFPLDIYTYNMMVRKLSIKQVDDA 500
              ETS    LG L+  FS   R      +LEE +  CFPLDIYTYN+++R L    ++ A
Sbjct: 764  QVETSQSSMLGLLIKAFSGHIRVSQSIKNLEEAIAKCFPLDIYTYNLLLRTLITSDMERA 823

Query: 499  FQLFLKICQKGRPKPNQWTYETLVHGFYRHGRTADAKVWVEEMLRRGFVPSEATKVLL 326
            F+LF ++C+KG   PN+WTY+ LVHG ++ GRT +AK  +E M ++GF  +E T+ L+
Sbjct: 824  FELFDRLCEKGY-VPNKWTYDILVHGLFKQGRTVEAKRLLEIMHKKGFSLTECTQALI 880


>ref|XP_004144802.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71210-like
            [Cucumis sativus]
          Length = 913

 Score =  214 bits (546), Expect = 2e-53
 Identities = 111/238 (46%), Positives = 160/238 (67%), Gaps = 1/238 (0%)
 Frame = -3

Query: 1036 SEKISDALRLFFDILKRRKIGRKVCNVVVIGLCKANKPDMALVIFSAIREKVKTVRPSLH 857
            SE+ISDAL    ++ + R IGRK+ NVVV+GLCKANK ++A   +  +R+K     PS+ 
Sbjct: 670  SERISDALIFLSNLSQTRTIGRKISNVVVVGLCKANKTNLAFDFWKHLRDKGTV--PSIE 727

Query: 856  CYEELIFVLCRHKRYDKVMDLIDDLIQVGRPVSSFIGNTLLLHSLKDHELYNSWVDLRPP 677
            CYEEL    C+++RYD V++L++DL +VGRP++SF+GN LL  SLK  +LY +WV+ R  
Sbjct: 728  CYEELAKHFCQNERYDAVVNLLNDLDKVGRPLTSFLGNVLLYSSLKTQKLYKAWVNSRVG 787

Query: 676  D-ETSPVWRLGELVGLFSNRFRDDIDTDDLEEVVGNCFPLDIYTYNMMVRKLSIKQVDDA 500
              ETS    LG L+  FS   R      +LEE +  CFPLDIYTYN+++R L    ++ A
Sbjct: 788  QVETSQSSMLGLLIKAFSGHIRVSQSIKNLEEAIAKCFPLDIYTYNLLLRTLITSDMERA 847

Query: 499  FQLFLKICQKGRPKPNQWTYETLVHGFYRHGRTADAKVWVEEMLRRGFVPSEATKVLL 326
            F+LF ++C+KG   PN+WTY+ LVHG ++ GRT +AK  +E M ++GF  +E T+ L+
Sbjct: 848  FELFDRLCEKGY-VPNKWTYDILVHGLFKQGRTVEAKRLLEIMHKKGFSLTECTQALI 904


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