BLASTX nr result

ID: Atractylodes22_contig00011992 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00011992
         (1154 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA40555.1| TNP2 [Antirrhinum majus]                               75   2e-11
gb|ABA97917.2| retrotransposon protein, putative, Ty3-gypsy subc...    69   3e-09
ref|XP_002449672.1| hypothetical protein SORBIDRAFT_05g021440 [S...    68   5e-09
emb|CAN59766.1| hypothetical protein VITISV_036906 [Vitis vinifera]    67   8e-09
ref|XP_003635639.1| PREDICTED: uncharacterized protein LOC100855...    65   2e-08

>emb|CAA40555.1| TNP2 [Antirrhinum majus]
          Length = 752

 Score = 75.5 bits (184), Expect = 2e-11
 Identities = 34/88 (38%), Positives = 54/88 (61%)
 Frame = +1

Query: 751  MNTSWMSEARSSTLFLKGLGEFLDLECKNNASDSGEIKCPCIKCANSVWVTREKATEHIV 930
            M+ SWM ++R +  +  GL +FLD    +N   +G+I CPC +C N++W+ RE A EH++
Sbjct: 6    MDKSWMHKSRLTEEYENGLDQFLDFAF-DNVCLNGKIICPCKQCKNALWMDRETAKEHLI 64

Query: 931  YNGIMKGYDTLIAHGEASSTQHLEVRKE 1014
             +G +KGY   + HGE SS     ++ E
Sbjct: 65   IDGFIKGYTHWVIHGEGSSNSQNNIQNE 92


>gb|ABA97917.2| retrotransposon protein, putative, Ty3-gypsy subclass, expressed
           [Oryza sativa Japonica Group]
          Length = 1846

 Score = 68.6 bits (166), Expect = 3e-09
 Identities = 31/80 (38%), Positives = 47/80 (58%)
 Frame = +1

Query: 751 MNTSWMSEARSSTLFLKGLGEFLDLECKNNASDSGEIKCPCIKCANSVWVTREKATEHIV 930
           M+ +WM E R + ++++G+  FLD     +A    +I CPC KC NS W  R    E ++
Sbjct: 1   MDKAWMDEPRHTQIYIQGVDNFLDFAFSKSAIGD-KILCPCRKCVNSSWKNRSDIREDLI 59

Query: 931 YNGIMKGYDTLIAHGEASST 990
            +G +KGY T + HGE SS+
Sbjct: 60  CDGFVKGYRTWMFHGETSSS 79


>ref|XP_002449672.1| hypothetical protein SORBIDRAFT_05g021440 [Sorghum bicolor]
            gi|241935515|gb|EES08660.1| hypothetical protein
            SORBIDRAFT_05g021440 [Sorghum bicolor]
          Length = 719

 Score = 67.8 bits (164), Expect = 5e-09
 Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
 Frame = +1

Query: 751  MNTSWMSEARSSTLFLKGLGEFLDLECKNNASDSGEIKCPCIKCANSVWVTREKATEHIV 930
            M+ +WM + R + ++ +G+  FL+    N+A  + +I CPC  C NS W  R    EH++
Sbjct: 1    MDKTWMDQPRQTLVYREGVDMFLEFAFSNSAKGN-QILCPCKACKNSCWRIRSIVLEHLI 59

Query: 931  YNGIMKGYDTLIAHGEASSTQHLEVRK-EVAQVG 1029
             +G M+GY T + HGE SS+     R+ E  +VG
Sbjct: 60   CDGFMEGYITWVNHGEPSSSFSTNSRQHERVEVG 93


>emb|CAN59766.1| hypothetical protein VITISV_036906 [Vitis vinifera]
          Length = 1394

 Score = 67.0 bits (162), Expect = 8e-09
 Identities = 31/78 (39%), Positives = 48/78 (61%)
 Frame = +1

Query: 751 MNTSWMSEARSSTLFLKGLGEFLDLECKNNASDSGEIKCPCIKCANSVWVTREKATEHIV 930
           MN SWMS+ R S  +  G+  F+    +N+A+ +  IKCPC++C N ++ T +K  EH+ 
Sbjct: 1   MNRSWMSKDRRSKDYEDGVENFISFAVQNSANQNS-IKCPCLQCGNLIFNTPQKIREHLF 59

Query: 931 YNGIMKGYDTLIAHGEAS 984
           + GI + Y T   HGEA+
Sbjct: 60  FYGIDQSYHTWFXHGEAA 77


>ref|XP_003635639.1| PREDICTED: uncharacterized protein LOC100855364, partial [Vitis
           vinifera]
          Length = 564

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 31/78 (39%), Positives = 47/78 (60%)
 Frame = +1

Query: 751 MNTSWMSEARSSTLFLKGLGEFLDLECKNNASDSGEIKCPCIKCANSVWVTREKATEHIV 930
           MN SWMS+ R S  +  G+  F+    +N+A  +  IKCPC++C N ++ T +K  EH+ 
Sbjct: 1   MNRSWMSKDRRSKDYEDGVENFISFAIQNSAHQNS-IKCPCLQCGNLIFNTPQKIREHLF 59

Query: 931 YNGIMKGYDTLIAHGEAS 984
           + GI + Y T   HGEA+
Sbjct: 60  FYGIDQSYHTWFWHGEAA 77


Top