BLASTX nr result

ID: Atractylodes22_contig00011979 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00011979
         (1620 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271062.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   205   3e-50
gb|ABJ16351.1| cytokinesis negative regulator RCP1 [Nicotiana ta...   194   4e-47
ref|XP_004158213.1| PREDICTED: uncharacterized LOC101219937 [Cuc...   169   3e-39
ref|XP_004135900.1| PREDICTED: uncharacterized protein LOC101219...   168   3e-39
ref|XP_002876533.1| zinc finger family protein [Arabidopsis lyra...   155   3e-35

>ref|XP_002271062.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
          Length = 312

 Score =  205 bits (521), Expect = 3e-50
 Identities = 130/350 (37%), Positives = 172/350 (49%), Gaps = 11/350 (3%)
 Frame = -2

Query: 1439 SSMDRHTYWCHECDMSISLIPASTTA-SLLCPHCNSDFLEELXXXXXXXXXXXXXXXXXX 1263
            +++DR TYWCHECDMS++L P+S+++ +LLCPHC+SDFLEE+                  
Sbjct: 16   TAIDRRTYWCHECDMSVTLSPSSSSSPTLLCPHCHSDFLEEMDSPNPNPNPNPT------ 69

Query: 1262 XXXXXXNRVXXXXXXXXXXXXXXPAAEYSSTFQFSSVAPSDDNFLLDSPYFHRVIHHLFN 1083
                                        +  F F S     +NFLLDSPY HR+IHHL +
Sbjct: 70   ----------------------------APNFSFHS-----ENFLLDSPYLHRLIHHLTH 96

Query: 1082 SEDXXXXXXXXXXXXXXXXS--------KSAIEAIPSVKITAAFLEIDPIVICAVCKDQF 927
              D                         ++++EA+P+ KIT +FL++DPI+ CAVCKDQF
Sbjct: 97   PSDTNNDGNDSSDLPPPRYLNPNSVAASRASLEALPTFKITPSFLQLDPILFCAVCKDQF 156

Query: 926  VIDDETKELPCKHMYHPDCILPWLSQHNSCPVCRFQLPTEAVDGDLKXXXXXXXXXXXXX 747
            V+D E K LPC H+YH DCILPWLSQ NSCP+CRF+LPT+    + +             
Sbjct: 157  VVDVEAKRLPCNHIYHSDCILPWLSQQNSCPLCRFRLPTD----EGEDSGDAGATVTMTF 212

Query: 746  XXXXXXXXXXXXXXXLRHLARRHRLVFPMRHHHYRHPQVEDEEEPEVLFSSTQIGEEVEV 567
                           LRH+ARR+RLVFP           E + + +        GE +  
Sbjct: 213  GDLMEDHELFGLGSTLRHIARRNRLVFPAL-------SAEGQAQAQ--------GESL-- 255

Query: 566  DVLPDSGRTNSVETVSSWPNWP-VDGGAVDGGEIAVSAARV-NDDADVVM 423
                  G  NSVETVSSWP    V GG   GG+    A  V N+DAD +M
Sbjct: 256  ------GPDNSVETVSSWPRQVLVGGGGGGGGDADFGAGAVANEDADAMM 299


>gb|ABJ16351.1| cytokinesis negative regulator RCP1 [Nicotiana tabacum]
          Length = 302

 Score =  194 bits (494), Expect = 4e-47
 Identities = 125/339 (36%), Positives = 161/339 (47%), Gaps = 4/339 (1%)
 Frame = -2

Query: 1424 HTYWCHECDMSISLIPASTTASLLCPHCNSDFLEELXXXXXXXXXXXXXXXXXXXXXXXX 1245
            HT+WCHECDMS+ L+   +T    CPHC+SDFLE++                        
Sbjct: 14   HTFWCHECDMSVFLLHLPSTDPPRCPHCHSDFLEQMDSFTPTLLPQFPNQPDSNPNLEDL 73

Query: 1244 NRVXXXXXXXXXXXXXXPAAEYSSTFQFSSVAPSDDNFLLDSPYFHRVIHHLFNSEDXXX 1065
                              + + ++   F+   PSDDNFLLDSPY HR+IHHL  + D   
Sbjct: 74   I-----------------STDLNTATNFT---PSDDNFLLDSPYLHRLIHHLTTANDAPI 113

Query: 1064 XXXXXXXXXXXXXSKSAIEAIPSVKITAAFLEIDPIVICAVCKDQFVIDDETKELPCKHM 885
                          K+A+EA+  +KI++  LE DP++ C VCKD F++D E K LPCKHM
Sbjct: 114  PNRQHSPAS-----KAAMEALEGIKISSLMLENDPVIPCPVCKDNFLLDMEVKMLPCKHM 168

Query: 884  YHPDCILPWLSQHNSCPVCRFQLPTEAVDG-DLKXXXXXXXXXXXXXXXXXXXXXXXXXX 708
            YH DCILPWL  +NSCPVCRF+LPTE  D  +                            
Sbjct: 169  YHSDCILPWLEVNNSCPVCRFKLPTEEEDDEECIRRRERFLGAMRLGEILAEEEDLFGFR 228

Query: 707  XXLRHLARRHRLVFPMRHHHYRHPQVEDEEEPEVLFSSTQIGEEVEVDVLPDSGRTNSVE 528
              LR +ARRH+L               D  E  +     Q G+ V V       R NSVE
Sbjct: 229  RTLRRVARRHQL---------------DGGESTI----GQAGQGVGV-----VARANSVE 264

Query: 527  TVSSWPNWPVDGGAVDGGEIAVSAARV---NDDADVVMS 420
            TVSSWP+WPV+ G+ DG E+  S  R+     D  VV S
Sbjct: 265  TVSSWPSWPVENGS-DGDEVGGSDNRLGGGQGDTTVVRS 302


>ref|XP_004158213.1| PREDICTED: uncharacterized LOC101219937 [Cucumis sativus]
          Length = 333

 Score =  169 bits (427), Expect = 3e-39
 Identities = 84/223 (37%), Positives = 126/223 (56%), Gaps = 12/223 (5%)
 Frame = -2

Query: 1439 SSMDRHTYWCHECDMSISLIP----------ASTTASLLCPHCNSDFLEELXXXXXXXXX 1290
            ++ +RHTYWCHECDMS++L+           +S+++SL+CPHC +DF+E +         
Sbjct: 10   AAAERHTYWCHECDMSVTLVSPSSSSSSSSSSSSSSSLVCPHCLTDFIEHMDFTIPTSSS 69

Query: 1289 XXXXXXXXXXXXXXXNRVXXXXXXXXXXXXXXPAAEYSSTFQFSSVAP--SDDNFLLDSP 1116
                           +                      S+F F    P  SDDN+LL+SP
Sbjct: 70   SISDNPNSSSPPTDSD---------------------PSSFVFVDPLPITSDDNYLLNSP 108

Query: 1115 YFHRVIHHLFNSEDXXXXXXXXXXXXXXXXSKSAIEAIPSVKITAAFLEIDPIVICAVCK 936
             F R+  HL +S +                 K+++ AIP++K+T+A L+ DP++ICA+CK
Sbjct: 109  QFLRLFQHLADSSESDFVPSVPFNPFTPI--KASVMAIPTIKVTSALLDEDPVLICAICK 166

Query: 935  DQFVIDDETKELPCKHMYHPDCILPWLSQHNSCPVCRFQLPTE 807
            DQF+++ E K+LPC H+YHPDCILPWLS H+SCP+CRF+LP++
Sbjct: 167  DQFLLEVEAKQLPCSHLYHPDCILPWLSNHDSCPLCRFKLPSD 209


>ref|XP_004135900.1| PREDICTED: uncharacterized protein LOC101219937 [Cucumis sativus]
          Length = 334

 Score =  168 bits (426), Expect = 3e-39
 Identities = 84/224 (37%), Positives = 126/224 (56%), Gaps = 13/224 (5%)
 Frame = -2

Query: 1439 SSMDRHTYWCHECDMSISLIP-----------ASTTASLLCPHCNSDFLEELXXXXXXXX 1293
            ++ +RHTYWCHECDMS++L+            +S+++SL+CPHC +DF+E +        
Sbjct: 10   AAAERHTYWCHECDMSVTLVSPSSSSSSSSSSSSSSSSLVCPHCLTDFIEHMDFTIPTSS 69

Query: 1292 XXXXXXXXXXXXXXXXNRVXXXXXXXXXXXXXXPAAEYSSTFQFSSVAP--SDDNFLLDS 1119
                            +                      S+F F    P  SDDN+LL+S
Sbjct: 70   SSISDNPNSSSPPTDSD---------------------PSSFVFVDPLPITSDDNYLLNS 108

Query: 1118 PYFHRVIHHLFNSEDXXXXXXXXXXXXXXXXSKSAIEAIPSVKITAAFLEIDPIVICAVC 939
            P F R+  HL +S +                 K+++ AIP++K+T+A L+ DP++ICA+C
Sbjct: 109  PQFLRLFQHLADSSESDFVPSVPFNPFTPI--KASVMAIPTIKVTSALLDEDPVLICAIC 166

Query: 938  KDQFVIDDETKELPCKHMYHPDCILPWLSQHNSCPVCRFQLPTE 807
            KDQF+++ E K+LPC H+YHPDCILPWLS H+SCP+CRF+LP++
Sbjct: 167  KDQFLLEVEAKQLPCSHLYHPDCILPWLSNHDSCPLCRFKLPSD 210


>ref|XP_002876533.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297322371|gb|EFH52792.1| zinc finger family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 302

 Score =  155 bits (392), Expect = 3e-35
 Identities = 83/218 (38%), Positives = 115/218 (52%), Gaps = 6/218 (2%)
 Frame = -2

Query: 1430 DRHTYWCHECDMSISLIPASTTASLLCPHCNSDFLEELXXXXXXXXXXXXXXXXXXXXXX 1251
            +R TYWCHECDMS+SL+ +S ++ LLCP C  DFLE +                      
Sbjct: 16   ERRTYWCHECDMSLSLLSSSDSSPLLCPQCRLDFLERMDHDSSSSNLFD----------- 64

Query: 1250 XXNRVXXXXXXXXXXXXXXPAAEYSSTFQFSSVAPSDDNFLLDSPYFHRVIHHLFNSEDX 1071
                V                 E    F   +V  SDDNFLLDSPY HR++ HL  S++ 
Sbjct: 65   ----VTIGDFEEDDGDNDDEDDEEDWCFVDPAVN-SDDNFLLDSPYLHRLLRHLA-SDNS 118

Query: 1070 XXXXXXXXXXXXXXXSKSAIEAIPSVKITAAFL------EIDPIVICAVCKDQFVIDDET 909
                             S I++IP+++I+++ L      + D +++CAVCK+ FV+ +  
Sbjct: 119  GSSSSSSSSSSSSLLKSSDIDSIPTIQISSSMLCSTDDSDPDSVLLCAVCKEDFVVGESA 178

Query: 908  KELPCKHMYHPDCILPWLSQHNSCPVCRFQLPTEAVDG 795
            + LPC H+YH DCI+PWLS HNSCP+CRF+LPT A  G
Sbjct: 179  RRLPCSHIYHSDCIVPWLSDHNSCPLCRFELPTTAKVG 216


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