BLASTX nr result

ID: Atractylodes22_contig00011970 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00011970
         (772 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274240.1| PREDICTED: WD repeat-containing protein 13 [...    56   6e-16
ref|XP_002306125.1| predicted protein [Populus trichocarpa] gi|2...    54   2e-14
ref|XP_003541608.1| PREDICTED: WD repeat-containing protein 13-l...    53   4e-14
ref|XP_004150062.1| PREDICTED: WD repeat-containing protein 13-l...    55   7e-14
ref|XP_003539636.1| PREDICTED: WD repeat-containing protein 13-l...    52   1e-13

>ref|XP_002274240.1| PREDICTED: WD repeat-containing protein 13 [Vitis vinifera]
           gi|297744762|emb|CBI38024.3| unnamed protein product
           [Vitis vinifera]
          Length = 477

 Score = 55.8 bits (133), Expect(2) = 6e-16
 Identities = 25/38 (65%), Positives = 31/38 (81%)
 Frame = -1

Query: 463 SVFNFSTERLISKIVVDNEVTAIDYDHTVQFILCGDAQ 350
           +VFNFST R+I+K V D+ VTA+D+DHT Q I CGDAQ
Sbjct: 277 TVFNFSTGRVINKAVFDDAVTAVDHDHTGQLIFCGDAQ 314



 Score = 54.3 bits (129), Expect(2) = 6e-16
 Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
 Frame = -3

Query: 353 TGTLXXXXXXXXXSKQKSDFTTIQYRTFSLLTHGPVLLSLTRDGSLSFSYVLKRRTGIEE 174
           TG+L         + +KS  TT+QYR+FSLL  GPVLL+ T+DGSLSF  V     G   
Sbjct: 326 TGSLSRSHRNRSSNNRKSPVTTVQYRSFSLLARGPVLLTCTQDGSLSFFSVALEIQGYLT 385

Query: 173 P--VIRISKSLISMLTGTCTVLKNE 105
           P   ++++  + S+    C +L  E
Sbjct: 386 PRCSLKLTPRVHSIRASFCPLLSLE 410


>ref|XP_002306125.1| predicted protein [Populus trichocarpa] gi|222849089|gb|EEE86636.1|
           predicted protein [Populus trichocarpa]
          Length = 508

 Score = 54.3 bits (129), Expect(2) = 2e-14
 Identities = 23/38 (60%), Positives = 32/38 (84%)
 Frame = -1

Query: 463 SVFNFSTERLISKIVVDNEVTAIDYDHTVQFILCGDAQ 350
           +VFNFST R+I+K+V D++VT++D+DHT   I CGDAQ
Sbjct: 302 TVFNFSTGRIINKLVFDDKVTSMDHDHTGHLIFCGDAQ 339



 Score = 50.4 bits (119), Expect(2) = 2e-14
 Identities = 26/48 (54%), Positives = 30/48 (62%)
 Frame = -3

Query: 353 TGTLXXXXXXXXXSKQKSDFTTIQYRTFSLLTHGPVLLSLTRDGSLSF 210
           TG L          K K   TT+QYR+FSLL  GPVLL+ T+DGSLSF
Sbjct: 351 TGALSRSHRYRSSGKSKYPVTTVQYRSFSLLAGGPVLLTCTQDGSLSF 398


>ref|XP_003541608.1| PREDICTED: WD repeat-containing protein 13-like [Glycine max]
          Length = 514

 Score = 52.8 bits (125), Expect(2) = 4e-14
 Identities = 22/38 (57%), Positives = 31/38 (81%)
 Frame = -1

Query: 463 SVFNFSTERLISKIVVDNEVTAIDYDHTVQFILCGDAQ 350
           +VFNFST R+I+K + D+EVT++D+DHT   + CGDAQ
Sbjct: 309 NVFNFSTGRVINKSIFDSEVTSMDHDHTGNLLFCGDAQ 346



 Score = 51.2 bits (121), Expect(2) = 4e-14
 Identities = 26/48 (54%), Positives = 32/48 (66%)
 Frame = -3

Query: 353 TGTLXXXXXXXXXSKQKSDFTTIQYRTFSLLTHGPVLLSLTRDGSLSF 210
           TG L         S+ KS  TT+QYR+FSLL  GPVLL+ T+DG+LSF
Sbjct: 358 TGVLSRSHRYRSSSRHKSPVTTVQYRSFSLLARGPVLLTCTQDGNLSF 405


>ref|XP_004150062.1| PREDICTED: WD repeat-containing protein 13-like [Cucumis sativus]
           gi|449519860|ref|XP_004166952.1| PREDICTED: WD
           repeat-containing protein 13-like [Cucumis sativus]
          Length = 490

 Score = 55.5 bits (132), Expect(2) = 7e-14
 Identities = 22/37 (59%), Positives = 33/37 (89%)
 Frame = -1

Query: 463 SVFNFSTERLISKIVVDNEVTAIDYDHTVQFILCGDA 353
           +VFNFST R+++K+V+D+EVT++D+DHT Q + CGDA
Sbjct: 290 TVFNFSTGRIVTKLVLDSEVTSMDHDHTGQLLFCGDA 326



 Score = 47.8 bits (112), Expect(2) = 7e-14
 Identities = 24/48 (50%), Positives = 32/48 (66%)
 Frame = -3

Query: 353 TGTLXXXXXXXXXSKQKSDFTTIQYRTFSLLTHGPVLLSLTRDGSLSF 210
           TG L         S++KS  +T+QYR+FSLL   PVLL+ T+DG+LSF
Sbjct: 339 TGALTRTHRQWCSSRRKSPVSTVQYRSFSLLARSPVLLTCTQDGNLSF 386


>ref|XP_003539636.1| PREDICTED: WD repeat-containing protein 13-like [Glycine max]
          Length = 553

 Score = 51.6 bits (122), Expect(2) = 1e-13
 Identities = 21/38 (55%), Positives = 31/38 (81%)
 Frame = -1

Query: 463 SVFNFSTERLISKIVVDNEVTAIDYDHTVQFILCGDAQ 350
           +VFNFST R+I++ + D+EVT++D+DHT   + CGDAQ
Sbjct: 301 NVFNFSTGRVINRSIFDSEVTSMDHDHTGHLLFCGDAQ 338



 Score = 50.8 bits (120), Expect(2) = 1e-13
 Identities = 26/48 (54%), Positives = 32/48 (66%)
 Frame = -3

Query: 353 TGTLXXXXXXXXXSKQKSDFTTIQYRTFSLLTHGPVLLSLTRDGSLSF 210
           TG L         S+ KS  TT+QYR+FSLL  GPVLL+ T+DG+LSF
Sbjct: 350 TGVLSRSHRYRSSSRHKSAVTTVQYRSFSLLARGPVLLTCTQDGNLSF 397


Top