BLASTX nr result

ID: Atractylodes22_contig00011969 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00011969
         (611 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284178.1| PREDICTED: cyclin-H1-1 [Vitis vinifera] gi|2...   115   6e-24
ref|XP_003526927.1| PREDICTED: cyclin-H1-1 isoform 2 [Glycine max]    108   8e-22
ref|XP_003526926.1| PREDICTED: cyclin-H1-1 isoform 1 [Glycine max]    108   8e-22
gb|ACU23520.1| unknown [Glycine max]                                  108   8e-22
ref|XP_002512403.1| cyclin h, putative [Ricinus communis] gi|223...   108   1e-21

>ref|XP_002284178.1| PREDICTED: cyclin-H1-1 [Vitis vinifera]
           gi|296089659|emb|CBI39478.3| unnamed protein product
           [Vitis vinifera]
          Length = 335

 Score =  115 bits (288), Expect = 6e-24
 Identities = 56/71 (78%), Positives = 59/71 (83%)
 Frame = +2

Query: 398 MADFLTSTHRSKWMFTPQDLKEKYKAANHRAKQMLEKYGATRVDVDLDGSLAYPELQSDA 577
           MADF TSTHRSKW+FTPQDL EKYKAAN RAKQ LEKYG TR++VD DGSL YPE Q  A
Sbjct: 1   MADFQTSTHRSKWIFTPQDLIEKYKAANQRAKQTLEKYGVTRIEVDADGSLQYPEPQISA 60

Query: 578 KDNAEKHSRSK 610
           KDNAEK SR K
Sbjct: 61  KDNAEKRSRPK 71


>ref|XP_003526927.1| PREDICTED: cyclin-H1-1 isoform 2 [Glycine max]
          Length = 314

 Score =  108 bits (270), Expect = 8e-22
 Identities = 51/71 (71%), Positives = 62/71 (87%)
 Frame = +2

Query: 398 MADFLTSTHRSKWMFTPQDLKEKYKAANHRAKQMLEKYGATRVDVDLDGSLAYPELQSDA 577
           MADF TSTHR+KW+F+PQ L EKY+AAN RAKQ+LEK GAT ++VD+DGSL+YPE Q  A
Sbjct: 1   MADFQTSTHRAKWIFSPQQLVEKYRAANQRAKQILEKCGATLMEVDVDGSLSYPEPQMTA 60

Query: 578 KDNAEKHSRSK 610
           KD+AEKHSR+K
Sbjct: 61  KDSAEKHSRTK 71


>ref|XP_003526926.1| PREDICTED: cyclin-H1-1 isoform 1 [Glycine max]
          Length = 335

 Score =  108 bits (270), Expect = 8e-22
 Identities = 51/71 (71%), Positives = 62/71 (87%)
 Frame = +2

Query: 398 MADFLTSTHRSKWMFTPQDLKEKYKAANHRAKQMLEKYGATRVDVDLDGSLAYPELQSDA 577
           MADF TSTHR+KW+F+PQ L EKY+AAN RAKQ+LEK GAT ++VD+DGSL+YPE Q  A
Sbjct: 1   MADFQTSTHRAKWIFSPQQLVEKYRAANQRAKQILEKCGATLMEVDVDGSLSYPEPQMTA 60

Query: 578 KDNAEKHSRSK 610
           KD+AEKHSR+K
Sbjct: 61  KDSAEKHSRTK 71


>gb|ACU23520.1| unknown [Glycine max]
          Length = 335

 Score =  108 bits (270), Expect = 8e-22
 Identities = 51/71 (71%), Positives = 62/71 (87%)
 Frame = +2

Query: 398 MADFLTSTHRSKWMFTPQDLKEKYKAANHRAKQMLEKYGATRVDVDLDGSLAYPELQSDA 577
           MADF TSTHR+KW+F+PQ L EKY+AAN RAKQ+LEK GAT ++VD+DGSL+YPE Q  A
Sbjct: 1   MADFQTSTHRAKWIFSPQQLVEKYRAANQRAKQILEKCGATLMEVDVDGSLSYPEPQMTA 60

Query: 578 KDNAEKHSRSK 610
           KD+AEKHSR+K
Sbjct: 61  KDSAEKHSRTK 71


>ref|XP_002512403.1| cyclin h, putative [Ricinus communis] gi|223548364|gb|EEF49855.1|
           cyclin h, putative [Ricinus communis]
          Length = 312

 Score =  108 bits (269), Expect = 1e-21
 Identities = 50/71 (70%), Positives = 59/71 (83%)
 Frame = +2

Query: 398 MADFLTSTHRSKWMFTPQDLKEKYKAANHRAKQMLEKYGATRVDVDLDGSLAYPELQSDA 577
           MADF TSTHR KW+FTPQ L EK+KA N RAKQMLEKYG TR++VD+DGS++YPE Q + 
Sbjct: 1   MADFQTSTHRVKWIFTPQQLVEKHKATNQRAKQMLEKYGTTRMEVDVDGSISYPEPQVNT 60

Query: 578 KDNAEKHSRSK 610
            DNA+KHSR K
Sbjct: 61  GDNADKHSRPK 71


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