BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00011960
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524280.1| PREDICTED: pentatricopeptide repeat-containi...   241   6e-62
ref|XP_002276540.1| PREDICTED: pentatricopeptide repeat-containi...   239   1e-61
ref|XP_003532845.1| PREDICTED: pentatricopeptide repeat-containi...   237   6e-61
ref|XP_002532046.1| pentatricopeptide repeat-containing protein,...   236   1e-60
ref|XP_002306340.1| predicted protein [Populus trichocarpa] gi|2...   230   8e-59

>ref|XP_003524280.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like [Glycine max]
          Length = 503

 Score =  241 bits (614), Expect = 6e-62
 Identities = 116/138 (84%), Positives = 128/138 (92%)
 Frame = +1

Query: 1   KLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKDKHKALSKALGYFDK 180
           KLISVMGKKGQTRMAMWLFSEMRN+GCRPDTSVYNALITAHLHS+DK KAL+KA+GYF K
Sbjct: 114 KLISVMGKKGQTRMAMWLFSEMRNTGCRPDTSVYNALITAHLHSRDKTKALAKAIGYFQK 173

Query: 181 MKGTERCKPSIVTYNILMRASAQARNVAQVEALFKDLEESVATPDIFTFNGVMDAYGKNG 360
           MKG ERCKP+IVTYNIL+RA AQARNV QV +LFKDL+ES+ +PDI+TFNGVMDAYGKNG
Sbjct: 174 MKGMERCKPNIVTYNILLRAFAQARNVEQVNSLFKDLDESIVSPDIYTFNGVMDAYGKNG 233

Query: 361 MIGEMEGILARMKSNQIK 414
           MI EME +LARMKSNQ K
Sbjct: 234 MIREMEAVLARMKSNQCK 251


>ref|XP_002276540.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic [Vitis vinifera]
           gi|296082481|emb|CBI21486.3| unnamed protein product
           [Vitis vinifera]
          Length = 489

 Score =  239 bits (611), Expect = 1e-61
 Identities = 117/138 (84%), Positives = 126/138 (91%)
 Frame = +1

Query: 1   KLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKDKHKALSKALGYFDK 180
           KLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNALITAHLHS+DK KAL KALGYFDK
Sbjct: 139 KLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSRDKSKALIKALGYFDK 198

Query: 181 MKGTERCKPSIVTYNILMRASAQARNVAQVEALFKDLEESVATPDIFTFNGVMDAYGKNG 360
           MKG ERCKP+IVTYNIL+RA AQA+NV Q  ALFK+L ES+ +PDIFTFNGVMDAYGKNG
Sbjct: 199 MKGMERCKPNIVTYNILLRAFAQAQNVNQANALFKELNESIVSPDIFTFNGVMDAYGKNG 258

Query: 361 MIGEMEGILARMKSNQIK 414
           MI EME +L+RMKSNQ K
Sbjct: 259 MIKEMESVLSRMKSNQCK 276


>ref|XP_003532845.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like [Glycine max]
          Length = 580

 Score =  237 bits (605), Expect = 6e-61
 Identities = 115/138 (83%), Positives = 127/138 (92%)
 Frame = +1

Query: 1   KLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKDKHKALSKALGYFDK 180
           KLISVMGKKGQTRMAMWLFSEMRN+GCRPDTSVYNALITAHL S+DK KAL+KA+GYF K
Sbjct: 177 KLISVMGKKGQTRMAMWLFSEMRNTGCRPDTSVYNALITAHLRSRDKIKALAKAIGYFQK 236

Query: 181 MKGTERCKPSIVTYNILMRASAQARNVAQVEALFKDLEESVATPDIFTFNGVMDAYGKNG 360
           MKG ERCKP+IVTYNIL+RA AQARNV QV +LFKDL+ES+ +PDI+TFNGVMDAYGKNG
Sbjct: 237 MKGMERCKPNIVTYNILLRAFAQARNVEQVNSLFKDLDESIVSPDIYTFNGVMDAYGKNG 296

Query: 361 MIGEMEGILARMKSNQIK 414
           MI EME +LARMKSNQ K
Sbjct: 297 MIREMEAVLARMKSNQCK 314


>ref|XP_002532046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528289|gb|EEF30336.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 478

 Score =  236 bits (602), Expect = 1e-60
 Identities = 113/138 (81%), Positives = 128/138 (92%)
 Frame = +1

Query: 1   KLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKDKHKALSKALGYFDK 180
           KLISVMGKKGQTRMAMWLFSEMRNSGCRPD+SVYNALITAHLHSKDK KAL KALGYF+K
Sbjct: 137 KLISVMGKKGQTRMAMWLFSEMRNSGCRPDSSVYNALITAHLHSKDKAKALIKALGYFEK 196

Query: 181 MKGTERCKPSIVTYNILMRASAQARNVAQVEALFKDLEESVATPDIFTFNGVMDAYGKNG 360
           MKG +RC+P++VTYNIL+RA AQARNV QV ALFKDL++S+ +PDI+T+NGVMDAYGKNG
Sbjct: 197 MKGMQRCQPNVVTYNILLRAFAQARNVNQVNALFKDLDQSIVSPDIYTYNGVMDAYGKNG 256

Query: 361 MIGEMEGILARMKSNQIK 414
           MI EME +L+RMKSNQ K
Sbjct: 257 MIREMESVLSRMKSNQCK 274



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 33/115 (28%), Positives = 59/115 (51%)
 Frame = +1

Query: 52  LFSEMRNSGCRPDTSVYNALITAHLHSKDKHKALSKALGYFDKMKGTERCKPSIVTYNIL 231
           LF ++  S   PD   YN ++ A+     K+  + +      +MK  + CKP I+T+N+L
Sbjct: 229 LFKDLDQSIVSPDIYTYNGVMDAY----GKNGMIREMESVLSRMKSNQ-CKPDIITFNLL 283

Query: 232 MRASAQARNVAQVEALFKDLEESVATPDIFTFNGVMDAYGKNGMIGEMEGILARM 396
           + +  + ++  ++E +FK L  S   P + TFN ++  YGK       E +L +M
Sbjct: 284 IDSYGKKQDFDKMEQVFKSLLHSKERPTLPTFNSMITNYGKARQKENAESVLQKM 338


>ref|XP_002306340.1| predicted protein [Populus trichocarpa] gi|222855789|gb|EEE93336.1|
           predicted protein [Populus trichocarpa]
          Length = 416

 Score =  230 bits (587), Expect = 8e-59
 Identities = 110/138 (79%), Positives = 126/138 (91%)
 Frame = +1

Query: 1   KLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKDKHKALSKALGYFDK 180
           KLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKDK K+L+KAL YF+K
Sbjct: 94  KLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKDKAKSLTKALAYFEK 153

Query: 181 MKGTERCKPSIVTYNILMRASAQARNVAQVEALFKDLEESVATPDIFTFNGVMDAYGKNG 360
           MK  ERC+P++VTYNI++RA AQARNV QV ALFKDLEES+ +PDI+T+NGV+DAYGKNG
Sbjct: 154 MKSIERCQPNVVTYNIILRAFAQARNVNQVNALFKDLEESIVSPDIYTYNGVLDAYGKNG 213

Query: 361 MIGEMEGILARMKSNQIK 414
           MI EME +L+RMK +Q K
Sbjct: 214 MIREMESVLSRMKIDQCK 231



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 32/115 (27%), Positives = 61/115 (53%)
 Frame = +1

Query: 52  LFSEMRNSGCRPDTSVYNALITAHLHSKDKHKALSKALGYFDKMKGTERCKPSIVTYNIL 231
           LF ++  S   PD   YN ++ A+     K+  + +      +MK  ++CKP I+T+N+L
Sbjct: 186 LFKDLEESIVSPDIYTYNGVLDAY----GKNGMIREMESVLSRMK-IDQCKPDIITFNLL 240

Query: 232 MRASAQARNVAQVEALFKDLEESVATPDIFTFNGVMDAYGKNGMIGEMEGILARM 396
           + +  + ++  ++E +FK L  S   P + TFN ++  YGK  +  + E +  +M
Sbjct: 241 IDSYGKKQDFEKMEQVFKSLLRSKEKPTLPTFNSMIVNYGKARLKDKAESVFKKM 295