BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00011946
         (684 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331171.1| predicted protein [Populus trichocarpa] gi|2...   320   2e-85
ref|XP_002284107.1| PREDICTED: DNA-directed RNA polymerases I, I...   308   6e-82
ref|XP_002885498.1| ATRPABC24.3 [Arabidopsis lyrata subsp. lyrat...   302   5e-80
ref|NP_188871.1| DNA-directed RNA polymerase II subunit E [Arabi...   301   8e-80
ref|XP_004148944.1| PREDICTED: DNA-directed RNA polymerases I, I...   298   7e-79

>ref|XP_002331171.1| predicted protein [Populus trichocarpa] gi|222873254|gb|EEF10385.1|
           predicted protein [Populus trichocarpa]
          Length = 206

 Score =  320 bits (819), Expect = 2e-85
 Identities = 158/189 (83%), Positives = 176/189 (93%)
 Frame = +2

Query: 116 SLTEEEIKRLCRIRKTVMEMLKDRNYLVGEFELEMDRRQFIQKYGDNMKREDLVISKSMK 295
           +LTEEEIKRL RIRKTVM+MLKDR Y VG+FE++M R QF  KYG+NMKREDLVI+K+ +
Sbjct: 2   TLTEEEIKRLLRIRKTVMQMLKDRGYFVGDFEIKMTREQFESKYGNNMKREDLVINKTKR 61

Query: 296 NDSSEQIYVFFPDEAKVGVKTIKNYINRMKSENVTRAILVVQQNLTPFARTCISEISTKF 475
           NDSS+QIYVFFP+EAKVGVKT+K Y NRMKSENV RAILVVQQNLTPFARTCI+EISTKF
Sbjct: 62  NDSSDQIYVFFPEEAKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISTKF 121

Query: 476 HLEVFQEAELLVNVKNHVLVPEHQVLANEEKKCLLERYTVKETQLPRIQVSDPVARYYGL 655
           HLEVFQEAELLVN+K HVLVPEHQVL+NEEKK LLERYTVKETQLPRIQ++DP+ARYYGL
Sbjct: 122 HLEVFQEAELLVNIKEHVLVPEHQVLSNEEKKTLLERYTVKETQLPRIQITDPIARYYGL 181

Query: 656 KRGQVVKII 682
           KRGQVVKII
Sbjct: 182 KRGQVVKII 190


>ref|XP_002284107.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1 isoform 1 [Vitis vinifera]
           gi|225445172|ref|XP_002284110.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit RPABC1 isoform 2
           [Vitis vinifera]
          Length = 206

 Score =  308 bits (789), Expect = 6e-82
 Identities = 152/189 (80%), Positives = 171/189 (90%)
 Frame = +2

Query: 116 SLTEEEIKRLCRIRKTVMEMLKDRNYLVGEFELEMDRRQFIQKYGDNMKREDLVISKSMK 295
           S +EEEI RL RIRKTVM+MLKDR Y VG+FE+ M + QF+ K+G+NMKREDLVI+K+ +
Sbjct: 2   SASEEEISRLFRIRKTVMQMLKDRGYFVGDFEINMTKHQFVSKFGENMKREDLVINKAKR 61

Query: 296 NDSSEQIYVFFPDEAKVGVKTIKNYINRMKSENVTRAILVVQQNLTPFARTCISEISTKF 475
            DSS+QIYVFFP+E KVGVKT+K Y NRMKSENV RAILVVQQNLTPFARTCI+EISTKF
Sbjct: 62  TDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISTKF 121

Query: 476 HLEVFQEAELLVNVKNHVLVPEHQVLANEEKKCLLERYTVKETQLPRIQVSDPVARYYGL 655
           HLEVFQEAELLVN+K HVLVPEHQVL +EEKK LLERYTVKETQLPRIQVSDP+ARY+GL
Sbjct: 122 HLEVFQEAELLVNIKEHVLVPEHQVLTSEEKKTLLERYTVKETQLPRIQVSDPIARYFGL 181

Query: 656 KRGQVVKII 682
           KRGQVVKII
Sbjct: 182 KRGQVVKII 190


>ref|XP_002885498.1| ATRPABC24.3 [Arabidopsis lyrata subsp. lyrata]
           gi|297331338|gb|EFH61757.1| ATRPABC24.3 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 205

 Score =  302 bits (773), Expect = 5e-80
 Identities = 149/188 (79%), Positives = 170/188 (90%)
 Frame = +2

Query: 119 LTEEEIKRLCRIRKTVMEMLKDRNYLVGEFELEMDRRQFIQKYGDNMKREDLVISKSMKN 298
           LTEEEIKRL RI+KT+M+MLKDR Y + + EL M ++QFI+K+GDNMKREDLV  K  +N
Sbjct: 2   LTEEEIKRLYRIQKTLMQMLKDRGYFIADSELTMTKQQFIRKHGDNMKREDLVTLKVKRN 61

Query: 299 DSSEQIYVFFPDEAKVGVKTIKNYINRMKSENVTRAILVVQQNLTPFARTCISEISTKFH 478
           D+S+Q+Y+FFPDEAKVGVKT+K Y NRMKSENV RAILVVQQNLTPFARTCISEIS+KFH
Sbjct: 62  DNSDQLYIFFPDEAKVGVKTMKMYTNRMKSENVYRAILVVQQNLTPFARTCISEISSKFH 121

Query: 479 LEVFQEAELLVNVKNHVLVPEHQVLANEEKKCLLERYTVKETQLPRIQVSDPVARYYGLK 658
           LEVFQEAE+LVN+K HVLVPEHQVL  EEKK LLERYTVKETQLPRIQV+DP+ARY+GLK
Sbjct: 122 LEVFQEAEMLVNIKEHVLVPEHQVLTTEEKKTLLERYTVKETQLPRIQVTDPIARYFGLK 181

Query: 659 RGQVVKII 682
           RGQVVKII
Sbjct: 182 RGQVVKII 189


>ref|NP_188871.1| DNA-directed RNA polymerase II subunit E [Arabidopsis thaliana]
           gi|13899113|gb|AAK48978.1|AF370551_1 RNA polymerase I,
           II and III 24.3 kDa subunit [Arabidopsis thaliana]
           gi|15724322|gb|AAL06554.1|AF412101_1 AT3g22320/MCB17_5
           [Arabidopsis thaliana] gi|3372233|gb|AAC28253.1| RNA
           polymerase I, II and III 24.3 kDa subunit [Arabidopsis
           thaliana] gi|9293866|dbj|BAB01769.1| RNA polymerase I,
           II and III 24.3 kDa subunit [Arabidopsis thaliana]
           gi|21554280|gb|AAM63355.1| RNA polymerase I, II and III
           24.3 kDa subunit [Arabidopsis thaliana]
           gi|25083949|gb|AAN72141.1| RNA polymerase I, II and III
           24.3 kDa subunit [Arabidopsis thaliana]
           gi|332643100|gb|AEE76621.1| DNA-directed RNA polymerase
           II subunit E [Arabidopsis thaliana]
          Length = 205

 Score =  301 bits (771), Expect = 8e-80
 Identities = 147/188 (78%), Positives = 171/188 (90%)
 Frame = +2

Query: 119 LTEEEIKRLCRIRKTVMEMLKDRNYLVGEFELEMDRRQFIQKYGDNMKREDLVISKSMKN 298
           LTEEE+KRL RI+KT+M+ML+DR Y + + EL M ++QFI+K+GDNMKREDLV  K+ +N
Sbjct: 2   LTEEELKRLYRIQKTLMQMLRDRGYFIADSELTMTKQQFIRKHGDNMKREDLVTLKAKRN 61

Query: 299 DSSEQIYVFFPDEAKVGVKTIKNYINRMKSENVTRAILVVQQNLTPFARTCISEISTKFH 478
           D+S+Q+Y+FFPDEAKVGVKT+K Y NRMKSENV RAILVVQQNLTPFARTCISEIS+KFH
Sbjct: 62  DNSDQLYIFFPDEAKVGVKTMKMYTNRMKSENVFRAILVVQQNLTPFARTCISEISSKFH 121

Query: 479 LEVFQEAELLVNVKNHVLVPEHQVLANEEKKCLLERYTVKETQLPRIQVSDPVARYYGLK 658
           LEVFQEAE+LVN+K HVLVPEHQVL  EEKK LLERYTVKETQLPRIQV+DP+ARY+GLK
Sbjct: 122 LEVFQEAEMLVNIKEHVLVPEHQVLTTEEKKTLLERYTVKETQLPRIQVTDPIARYFGLK 181

Query: 659 RGQVVKII 682
           RGQVVKII
Sbjct: 182 RGQVVKII 189


>ref|XP_004148944.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like [Cucumis sativus]
          Length = 207

 Score =  298 bits (763), Expect = 7e-79
 Identities = 149/189 (78%), Positives = 170/189 (89%), Gaps = 1/189 (0%)
 Frame = +2

Query: 119 LTEEEIKRLCRIRKTVMEMLKDRNYLVGEFELEMDRRQFIQKYGDNMKREDLVISKSMKN 298
           L+EEEI RL RIRKTV +ML+DR Y VG+FE++M R QF QKYG+NMKRED+VI+KS +N
Sbjct: 3   LSEEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENMKREDIVINKSKRN 62

Query: 299 DSSEQIYVFFPDEAKVGVKTIKNYINRMKSENVTRAILVVQQNLTPFARTCISEISTK-F 475
           DSS+QIYVFFP+EAKVG+K +K Y  RMKSENV RAILVVQQNLTPFAR C+SE ++K F
Sbjct: 63  DSSDQIYVFFPEEAKVGIKPLKTYTTRMKSENVFRAILVVQQNLTPFARACMSEATSKSF 122

Query: 476 HLEVFQEAELLVNVKNHVLVPEHQVLANEEKKCLLERYTVKETQLPRIQVSDPVARYYGL 655
           HLEVFQEAELLVN+K+HVLVPEHQ+L NEEKK LLERYTVKETQLPRIQV+DPVARYYGL
Sbjct: 123 HLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGL 182

Query: 656 KRGQVVKII 682
           KRGQVVKII
Sbjct: 183 KRGQVVKII 191