BLASTX nr result

ID: Atractylodes22_contig00011825 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00011825
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284611.2| PREDICTED: DNA topoisomerase 2-binding prote...   162   3e-38
ref|XP_002520311.1| topbp1, putative [Ricinus communis] gi|22354...   160   8e-38
dbj|BAJ53188.1| JMS09K11.6 [Jatropha curcas]                          158   4e-37
ref|XP_003548358.1| PREDICTED: DNA topoisomerase 2-binding prote...   141   6e-32
ref|XP_002887677.1| MEI1 protein [Arabidopsis lyrata subsp. lyra...   140   1e-31

>ref|XP_002284611.2| PREDICTED: DNA topoisomerase 2-binding protein 1-B-like [Vitis
           vinifera]
          Length = 962

 Score =  162 bits (410), Expect = 3e-38
 Identities = 82/123 (66%), Positives = 96/123 (78%), Gaps = 1/123 (0%)
 Frame = +1

Query: 49  QEISCDGMADADLEATLSQNMASTFSDIPGFINE-DNRAPSIQPNSSMNIDGCVAEDSQS 225
           Q + C G+ D DLEATLSQN  STF D P FI E + R P++Q      +DG VA+DSQ+
Sbjct: 279 QAVPCSGIGDPDLEATLSQNTCSTFLDAPIFIKEGETREPAMQDKDENKLDGLVADDSQT 338

Query: 226 EDNDLYLLNCKIHLVGFDASEMRRLVNMVRRGGGSRYMSLNEQLTHIVVGTPSETEKKEV 405
           ED+DLYL +C+I LVGF+ASEMR+LVNMVRRGGGSRYMS NE+LTHIVVGTPSE EKK V
Sbjct: 339 EDSDLYLSDCRILLVGFEASEMRKLVNMVRRGGGSRYMSFNEKLTHIVVGTPSEVEKKVV 398

Query: 406 RSL 414
           R L
Sbjct: 399 RGL 401


>ref|XP_002520311.1| topbp1, putative [Ricinus communis] gi|223540530|gb|EEF42097.1|
           topbp1, putative [Ricinus communis]
          Length = 950

 Score =  160 bits (406), Expect = 8e-38
 Identities = 77/117 (65%), Positives = 95/117 (81%), Gaps = 1/117 (0%)
 Frame = +1

Query: 67  GMADADLEATLSQNMASTFSDIPGFINE-DNRAPSIQPNSSMNIDGCVAEDSQSEDNDLY 243
           G++D DLE TLSQNM+S FSD P  + E DN  P++ P +  N+DGCVA DSQSED+DLY
Sbjct: 279 GVSDLDLEPTLSQNMSSMFSDPPVSVKEWDNEVPAVHPTNETNLDGCVANDSQSEDSDLY 338

Query: 244 LLNCKIHLVGFDASEMRRLVNMVRRGGGSRYMSLNEQLTHIVVGTPSETEKKEVRSL 414
           L  C+I LVGF+ASE+R+LVNMVRRGGGSRY+S N++LTHIVVG P+E EKKE+R L
Sbjct: 339 LSECRISLVGFEASELRKLVNMVRRGGGSRYLSFNDKLTHIVVGAPTEVEKKELRGL 395


>dbj|BAJ53188.1| JMS09K11.6 [Jatropha curcas]
          Length = 918

 Score =  158 bits (400), Expect = 4e-37
 Identities = 78/117 (66%), Positives = 95/117 (81%), Gaps = 1/117 (0%)
 Frame = +1

Query: 67  GMADADLEATLSQNMASTFSDIPGFINE-DNRAPSIQPNSSMNIDGCVAEDSQSEDNDLY 243
           G +D DLEATLSQNM+S FSD P F+ E D + P++ P +  N+D CVA DSQSED+DLY
Sbjct: 277 GFSDPDLEATLSQNMSSMFSDPPIFMKEGDKQMPAVHPINETNLDVCVANDSQSEDSDLY 336

Query: 244 LLNCKIHLVGFDASEMRRLVNMVRRGGGSRYMSLNEQLTHIVVGTPSETEKKEVRSL 414
           L  C+I LVGF+ASE+R+LVNMVRRGGGSRYMS N++LTHIVVG P+E EKKE+R L
Sbjct: 337 LSECRISLVGFEASELRKLVNMVRRGGGSRYMSFNDKLTHIVVGAPTEVEKKELRGL 393


>ref|XP_003548358.1| PREDICTED: DNA topoisomerase 2-binding protein 1-A-like [Glycine
           max]
          Length = 970

 Score =  141 bits (355), Expect = 6e-32
 Identities = 73/123 (59%), Positives = 92/123 (74%), Gaps = 1/123 (0%)
 Frame = +1

Query: 49  QEISCDGMADADLEATLSQNMASTFSDIPGFINEDNRAP-SIQPNSSMNIDGCVAEDSQS 225
           Q  SC    D DLEAT S++M+S  S++P F  E +  P  +Q  S +N DG VA DS+S
Sbjct: 312 QVFSCAEFMDRDLEATQSEHMSSV-SNVPLFAKEADSEPLPLQTCSELNFDGAVANDSES 370

Query: 226 EDNDLYLLNCKIHLVGFDASEMRRLVNMVRRGGGSRYMSLNEQLTHIVVGTPSETEKKEV 405
           +DNDLYL  C+I LVGF+A EMR+LVNMVR+GGGSRYMS N++LTHIV+G P+E EKK+V
Sbjct: 371 DDNDLYLSECRILLVGFEACEMRKLVNMVRKGGGSRYMSFNDKLTHIVIGNPTEMEKKDV 430

Query: 406 RSL 414
           RSL
Sbjct: 431 RSL 433


>ref|XP_002887677.1| MEI1 protein [Arabidopsis lyrata subsp. lyrata]
           gi|297333518|gb|EFH63936.1| MEI1 protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 970

 Score =  140 bits (352), Expect = 1e-31
 Identities = 69/119 (57%), Positives = 91/119 (76%)
 Frame = +1

Query: 58  SCDGMADADLEATLSQNMASTFSDIPGFINEDNRAPSIQPNSSMNIDGCVAEDSQSEDND 237
           SC    D+D+EA+ SQN+ ST ++    + E +  P+ +P    NIDGC A DS+SEDND
Sbjct: 301 SCAQSRDSDIEASGSQNVFSTSTNPSTDVKEPSGGPTTRPQEQ-NIDGCTARDSESEDND 359

Query: 238 LYLLNCKIHLVGFDASEMRRLVNMVRRGGGSRYMSLNEQLTHIVVGTPSETEKKEVRSL 414
           LYL +C+I L+GF+ASEMR+L  +VRRGGGSRYM LNE++THIVVGTPSE+EK+E RS+
Sbjct: 360 LYLSDCRIFLLGFEASEMRKLAKLVRRGGGSRYMLLNERMTHIVVGTPSESEKREARSV 418


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