BLASTX nr result

ID: Atractylodes22_contig00011701 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00011701
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004170335.1| PREDICTED: ribosome biogenesis protein BRX1 ...    94   4e-37
ref|XP_002529740.1| ribosome biogenesis protein brix, putative [...    95   2e-36
ref|XP_002329145.1| predicted protein [Populus trichocarpa] gi|2...    92   3e-36
ref|XP_002270029.1| PREDICTED: ribosome biogenesis protein BRX1 ...    90   5e-36
emb|CAN61504.1| hypothetical protein VITISV_011736 [Vitis vinifera]    90   5e-36

>ref|XP_004170335.1| PREDICTED: ribosome biogenesis protein BRX1 homolog, partial
           [Cucumis sativus]
          Length = 252

 Score = 94.4 bits (233), Expect(2) = 4e-37
 Identities = 42/44 (95%), Positives = 42/44 (95%)
 Frame = +3

Query: 195 KEMIIQIFGTPKEHRKSKPYHDHVFVFSIVDDHIWFRNYQISCP 326
           KEMIIQIFGTPKEHR SKPYHDHVFVFSIVDDHIWFRNYQIS P
Sbjct: 113 KEMIIQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVP 156



 Score = 85.5 bits (210), Expect(2) = 4e-37
 Identities = 39/42 (92%), Positives = 41/42 (97%)
 Frame = +1

Query: 1   VHTMEELKLTGNHLKGARPLLTFSSNFDKDPHWKLLKEMIIQ 126
           VHTMEELKLTGNHLKG+RP+LTFSSNFDKD HWKLLKEMIIQ
Sbjct: 77  VHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEMIIQ 118


>ref|XP_002529740.1| ribosome biogenesis protein brix, putative [Ricinus communis]
           gi|223530781|gb|EEF32647.1| ribosome biogenesis protein
           brix, putative [Ricinus communis]
          Length = 312

 Score = 94.7 bits (234), Expect(2) = 2e-36
 Identities = 41/44 (93%), Positives = 43/44 (97%)
 Frame = +3

Query: 195 KEMIIQIFGTPKEHRKSKPYHDHVFVFSIVDDHIWFRNYQISCP 326
           KEM++QIFGTPKEHRKSKPYHDHVFVFSIVDDHIWFRNYQIS P
Sbjct: 174 KEMLMQIFGTPKEHRKSKPYHDHVFVFSIVDDHIWFRNYQISVP 217



 Score = 82.8 bits (203), Expect(2) = 2e-36
 Identities = 36/42 (85%), Positives = 41/42 (97%)
 Frame = +1

Query: 1   VHTMEELKLTGNHLKGARPLLTFSSNFDKDPHWKLLKEMIIQ 126
           VHTMEELKLTGNHLKG+RP+LTFS+NFDKD HWKLLKEM++Q
Sbjct: 138 VHTMEELKLTGNHLKGSRPILTFSANFDKDAHWKLLKEMLMQ 179


>ref|XP_002329145.1| predicted protein [Populus trichocarpa] gi|222869814|gb|EEF06945.1|
           predicted protein [Populus trichocarpa]
          Length = 317

 Score = 91.7 bits (226), Expect(2) = 3e-36
 Identities = 40/44 (90%), Positives = 43/44 (97%)
 Frame = +3

Query: 195 KEMIIQIFGTPKEHRKSKPYHDHVFVFSIVDDHIWFRNYQISCP 326
           KEMIIQIFGTPK+HRKSKP++DHVFVFSIVDDHIWFRNYQIS P
Sbjct: 179 KEMIIQIFGTPKDHRKSKPFYDHVFVFSIVDDHIWFRNYQISVP 222



 Score = 85.5 bits (210), Expect(2) = 3e-36
 Identities = 39/42 (92%), Positives = 41/42 (97%)
 Frame = +1

Query: 1   VHTMEELKLTGNHLKGARPLLTFSSNFDKDPHWKLLKEMIIQ 126
           VHTMEELKLTGNHLKG+RPLLTFS+NFDKD HWKLLKEMIIQ
Sbjct: 143 VHTMEELKLTGNHLKGSRPLLTFSANFDKDAHWKLLKEMIIQ 184


>ref|XP_002270029.1| PREDICTED: ribosome biogenesis protein BRX1 homolog [Vitis
           vinifera] gi|297744237|emb|CBI37207.3| unnamed protein
           product [Vitis vinifera]
          Length = 316

 Score = 89.7 bits (221), Expect(2) = 5e-36
 Identities = 38/44 (86%), Positives = 40/44 (90%)
 Frame = +3

Query: 195 KEMIIQIFGTPKEHRKSKPYHDHVFVFSIVDDHIWFRNYQISCP 326
           KEMI QIFGTPKEHRK+KPYHDHVF FS+ DDHIWFRNYQIS P
Sbjct: 178 KEMITQIFGTPKEHRKAKPYHDHVFAFSLADDHIWFRNYQISVP 221



 Score = 86.7 bits (213), Expect(2) = 5e-36
 Identities = 39/42 (92%), Positives = 41/42 (97%)
 Frame = +1

Query: 1   VHTMEELKLTGNHLKGARPLLTFSSNFDKDPHWKLLKEMIIQ 126
           VHTMEELKLTGNHLKG+RPLLTFS+NFDKDPHWKLLKEMI Q
Sbjct: 142 VHTMEELKLTGNHLKGSRPLLTFSTNFDKDPHWKLLKEMITQ 183


>emb|CAN61504.1| hypothetical protein VITISV_011736 [Vitis vinifera]
          Length = 316

 Score = 89.7 bits (221), Expect(2) = 5e-36
 Identities = 38/44 (86%), Positives = 40/44 (90%)
 Frame = +3

Query: 195 KEMIIQIFGTPKEHRKSKPYHDHVFVFSIVDDHIWFRNYQISCP 326
           KEMI QIFGTPKEHRK+KPYHDHVF FS+ DDHIWFRNYQIS P
Sbjct: 178 KEMITQIFGTPKEHRKAKPYHDHVFAFSLADDHIWFRNYQISVP 221



 Score = 86.7 bits (213), Expect(2) = 5e-36
 Identities = 39/42 (92%), Positives = 41/42 (97%)
 Frame = +1

Query: 1   VHTMEELKLTGNHLKGARPLLTFSSNFDKDPHWKLLKEMIIQ 126
           VHTMEELKLTGNHLKG+RPLLTFS+NFDKDPHWKLLKEMI Q
Sbjct: 142 VHTMEELKLTGNHLKGSRPLLTFSTNFDKDPHWKLLKEMITQ 183


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