BLASTX nr result

ID: Atractylodes22_contig00011678 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00011678
         (673 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71833.1| hypothetical protein VITISV_005586 [Vitis vinifera]   127   1e-27
ref|XP_002284720.1| PREDICTED: HMG-Y-related protein A [Vitis vi...   127   2e-27
dbj|BAA11766.1| high mobility group protein [Canavalia gladiata]...   124   2e-26
ref|XP_002527784.1| Histone H1, putative [Ricinus communis] gi|2...   119   7e-25
ref|XP_004150116.1| PREDICTED: HMG-Y-related protein A-like [Cuc...   117   3e-24

>emb|CAN71833.1| hypothetical protein VITISV_005586 [Vitis vinifera]
          Length = 182

 Score =  127 bits (320), Expect = 1e-27
 Identities = 73/147 (49%), Positives = 93/147 (63%), Gaps = 6/147 (4%)
 Frame = -3

Query: 611 MATEQL---AAPPLSLPQYPELIFSAIEAMDEKNGANKSTISKHIEATYGNLPAAHSTLL 441
           MATE+      PP S+PQY E+I +AIEA+++K+G+NKS+ISK+IE+TYG+LPAAHSTLL
Sbjct: 1   MATEEPNNPPQPPSSIPQYSEMIMAAIEALNDKSGSNKSSISKYIESTYGDLPAAHSTLL 60

Query: 440 SHHLNKMKATGQLIMVKNNYVXXXXXXXXXXXXXXXXXXXXPLPPDTVLSXXXXXXXXXX 261
           +HHLNKMK +G L+MVKNNY+                    PLPP TVL+          
Sbjct: 61  AHHLNKMKQSGDLVMVKNNYMKPDPNAPPRRGRGRPPKPKVPLPPGTVLAPPRPRGRPPK 120

Query: 260 XXXPLAPKT---ATSSVSGRKRGRPPK 189
              P AP +     SS SG+ RGRPPK
Sbjct: 121 PRDPFAPVSPPKKASSGSGKPRGRPPK 147


>ref|XP_002284720.1| PREDICTED: HMG-Y-related protein A [Vitis vinifera]
           gi|297737664|emb|CBI26865.3| unnamed protein product
           [Vitis vinifera]
          Length = 182

 Score =  127 bits (319), Expect = 2e-27
 Identities = 73/147 (49%), Positives = 92/147 (62%), Gaps = 6/147 (4%)
 Frame = -3

Query: 611 MATEQL---AAPPLSLPQYPELIFSAIEAMDEKNGANKSTISKHIEATYGNLPAAHSTLL 441
           MATE+      PP S+PQY E+I +AIEA+++K G+NKS+ISK+IE+TYG+LPAAHSTLL
Sbjct: 1   MATEEPNNPPQPPSSIPQYSEMIMAAIEALNDKGGSNKSSISKYIESTYGDLPAAHSTLL 60

Query: 440 SHHLNKMKATGQLIMVKNNYVXXXXXXXXXXXXXXXXXXXXPLPPDTVLSXXXXXXXXXX 261
           +HHLNKMK +G L+MVKNNY+                    PLPP TVL+          
Sbjct: 61  AHHLNKMKQSGDLVMVKNNYMKPDPNAPPRRGRGRPPKPKVPLPPGTVLAPPRPRGRPPK 120

Query: 260 XXXPLAPKT---ATSSVSGRKRGRPPK 189
              P AP +     SS SG+ RGRPPK
Sbjct: 121 PRDPFAPVSPPKKASSGSGKPRGRPPK 147


>dbj|BAA11766.1| high mobility group protein [Canavalia gladiata]
           gi|1483173|dbj|BAA13133.1| high mobility group protein
           [Canavalia gladiata]
          Length = 178

 Score =  124 bits (311), Expect = 2e-26
 Identities = 69/148 (46%), Positives = 90/148 (60%), Gaps = 2/148 (1%)
 Frame = -3

Query: 611 MATEQLAAPPLSLPQYPELIFSAIEAMDEKNGANKSTISKHIEATYGNLPAAHSTLLSHH 432
           MATE++  PP SLP YPE++  A++A++E +G+NKS ISK+IE+TYG LP  H+TLL+HH
Sbjct: 1   MATEEVNKPP-SLPPYPEMVMKALDALNEPSGSNKSAISKYIESTYGELPDGHATLLAHH 59

Query: 431 LNKMKATGQLIMVKNNYVXXXXXXXXXXXXXXXXXXXXPLPPDTVLS--XXXXXXXXXXX 258
           LNKMK +G+L+ +KNNY+                    PLPP TVLS             
Sbjct: 60  LNKMKDSGELVFLKNNYMKPDPNAPPKRGRGRPPKPKVPLPPGTVLSPPRPRGRPPKDPN 119

Query: 257 XXPLAPKTATSSVSGRKRGRPPKFGSSP 174
             P +PKT  S+ SGR RGRP K   SP
Sbjct: 120 APPKSPKTKVSTGSGRPRGRPKKIARSP 147


>ref|XP_002527784.1| Histone H1, putative [Ricinus communis] gi|223532819|gb|EEF34594.1|
           Histone H1, putative [Ricinus communis]
          Length = 199

 Score =  119 bits (297), Expect = 7e-25
 Identities = 72/181 (39%), Positives = 97/181 (53%), Gaps = 9/181 (4%)
 Frame = -3

Query: 602 EQLAAPPLSLPQYPELIFSAIEAMDEKNGANKSTISKHIEATYGNLPAAHSTLLSHHLNK 423
           +Q    P ++PQYPE+I +AIE++++KNG+NKS ISK +E TY +LP AH+TLLSHHLNK
Sbjct: 19  QQQQQQPSTIPQYPEMILAAIESLNDKNGSNKSAISKQMETTYPDLPPAHTTLLSHHLNK 78

Query: 422 MKATGQLIMVKNNYVXXXXXXXXXXXXXXXXXXXXPLPPDTVLSXXXXXXXXXXXXXPLA 243
           MK +GQL++VKNNY+                    PLPP  V++             P A
Sbjct: 79  MKQSGQLVLVKNNYMKPDPNAPPKRGRGRPPKPKAPLPPGAVIAPPRPRGRPPKPRDPFA 138

Query: 242 P-----KTATSSVSGRKRGRPPKFGS----SPTKXXXXXXXXXXXXXXXPKVKASVAAPV 90
           P     K   ++ +GR RGRPPK  S    +P+                PKVK +VA   
Sbjct: 139 PVASPKKKIATAPTGRPRGRPPKLPSAAPPTPSVSSAAASQVKRGRGRPPKVKTAVAPVA 198

Query: 89  G 87
           G
Sbjct: 199 G 199


>ref|XP_004150116.1| PREDICTED: HMG-Y-related protein A-like [Cucumis sativus]
           gi|449523968|ref|XP_004168995.1| PREDICTED:
           HMG-Y-related protein A-like [Cucumis sativus]
          Length = 186

 Score =  117 bits (292), Expect = 3e-24
 Identities = 78/186 (41%), Positives = 100/186 (53%), Gaps = 11/186 (5%)
 Frame = -3

Query: 611 MATE-QLAAPPL------SLPQYPELIFSAIEAMDEKNGANKSTISKHIEATYGNLPAAH 453
           MAT+ QL  PP       SLP YPE+I +AI+++++KNG +KS I+K IE+TYG+LP A 
Sbjct: 1   MATDDQLNNPPQPPPPAPSLPHYPEMIMAAIDSLNDKNGVSKSAITKQIESTYGDLPPAF 60

Query: 452 STLLSHHLNKMKATGQLIMVKNNYVXXXXXXXXXXXXXXXXXXXXPLPPDTVLSXXXXXX 273
           +TLL+HHL+ MK TGQL+ +KNNY+                    PLPP TV+S      
Sbjct: 61  TTLLTHHLDVMKQTGQLLFIKNNYMKPDPNAPPKRGRGRPPKPKVPLPPGTVVSPPRPRG 120

Query: 272 XXXXXXXPLA----PKTATSSVSGRKRGRPPKFGSSPTKXXXXXXXXXXXXXXXPKVKAS 105
                  P A    PK  T+S SGR RGRPPK+                     PKVK +
Sbjct: 121 RPPKPKDPFAPISQPKKKTTSGSGRPRGRPPKYPKPAPTSAPPVAGPPRGRGRPPKVKPA 180

Query: 104 VAAPVG 87
           V APVG
Sbjct: 181 V-APVG 185


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