BLASTX nr result

ID: Atractylodes22_contig00011656 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00011656
         (610 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527396.1| nucleic acid binding protein, putative [Rici...    57   2e-06
ref|XP_002280155.2| PREDICTED: zinc finger protein NUTCRACKER is...    57   3e-06
emb|CAN79105.1| hypothetical protein VITISV_006257 [Vitis vinifera]    57   3e-06

>ref|XP_002527396.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223533206|gb|EEF34962.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 552

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 54/157 (34%), Positives = 70/157 (44%), Gaps = 10/157 (6%)
 Frame = -1

Query: 454 PPPSAYMSATALLQKAAQMGTTHLSRGTSIPAPCTTSSSSMLRPH---HQQYQAHVXXXX 284
           PPPS +MSATALLQKAAQMG T  S+        TT++  M+RPH   HQ  QAHV    
Sbjct: 351 PPPSPHMSATALLQKAAQMGATMSSK--------TTTAGLMMRPHQHQHQHEQAHVTADS 402

Query: 283 XXXXXXXXXXXXSTGLHLDDHPQEMMALASFGN-VKDIACAGGXXXXXXXXXXXXXXPMN 107
                          L+L    QE+ A    G+ V  +  AG                  
Sbjct: 403 TNNNANTTGFV----LNLSSRDQELAASGGGGSFVHSLQAAGANGVLLQEM--------- 449

Query: 106 MISMMMNPDGF-----ADVSTFEDAF-SQILDAKKEE 14
           M S+     GF     A  ++FEDAF S +L+  K++
Sbjct: 450 MNSLSSAASGFEGTATATATSFEDAFVSGVLNNSKKD 486


>ref|XP_002280155.2| PREDICTED: zinc finger protein NUTCRACKER isoform 2 [Vitis
           vinifera]
          Length = 509

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 55/164 (33%), Positives = 75/164 (45%), Gaps = 11/164 (6%)
 Frame = -1

Query: 460 YHPPPSAYMSATALLQKAAQMGTTHLSRGTSIPAPCTTSSSSMLRPHHQQYQAHVXXXXX 281
           YHP  S +MSATALLQKAAQMG T +S+ T        S  +M+RPH    QAHV     
Sbjct: 295 YHPTLSPHMSATALLQKAAQMGAT-MSKTT---GGSGASPPAMIRPH----QAHV----- 341

Query: 280 XXXXXXXXXXXSTGLHLDDHPQEMM------ALASFGN-----VKDIACAGGXXXXXXXX 134
                      +TG  L+   +E M       LA FGN         A A          
Sbjct: 342 ---SADHSCNNTTGFGLNLSSREEMGGGFVQGLAPFGNKAAAVPSAAAAAAAATGPGGGA 398

Query: 133 XXXXXXPMNMISMMMNPDGFADVSTFEDAFSQILDAKKEEDHDH 2
                   +M++ + +  GF D S+FEDAF  +L+++K  ++ H
Sbjct: 399 PSPSLLLQDMMTSLSSATGF-DSSSFEDAFGGMLNSRKNGNNLH 441


>emb|CAN79105.1| hypothetical protein VITISV_006257 [Vitis vinifera]
          Length = 532

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 55/164 (33%), Positives = 75/164 (45%), Gaps = 11/164 (6%)
 Frame = -1

Query: 460 YHPPPSAYMSATALLQKAAQMGTTHLSRGTSIPAPCTTSSSSMLRPHHQQYQAHVXXXXX 281
           YHP  S +MSATALLQKAAQMG T +S+ T        S  +M+RPH    QAHV     
Sbjct: 318 YHPTLSPHMSATALLQKAAQMGAT-MSKTT---GGSGASPPAMIRPH----QAHV----- 364

Query: 280 XXXXXXXXXXXSTGLHLDDHPQEMM------ALASFGN-----VKDIACAGGXXXXXXXX 134
                      +TG  L+   +E M       LA FGN         A A          
Sbjct: 365 ---SADHSCNNTTGFGLNLSSREEMGGGFVQGLAPFGNKAAAVPSAAAAAAAATGPGGGA 421

Query: 133 XXXXXXPMNMISMMMNPDGFADVSTFEDAFSQILDAKKEEDHDH 2
                   +M++ + +  GF D S+FEDAF  +L+++K  ++ H
Sbjct: 422 PSPSLLLQDMMTSLSSATGF-DSSSFEDAFGGMLNSRKNGNNLH 464


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