BLASTX nr result

ID: Atractylodes22_contig00011624 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00011624
         (1023 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284043.1| PREDICTED: sigma factor sigB regulation prot...   441   e-121
gb|AFK41000.1| unknown [Medicago truncatula]                          435   e-119
ref|XP_002524966.1| sigma factor sigb regulation protein rsbq, p...   435   e-119
ref|XP_003608457.1| Sigma factor sigB regulation protein rsbQ [M...   435   e-119
ref|XP_002303383.1| predicted protein [Populus trichocarpa] gi|1...   429   e-118

>ref|XP_002284043.1| PREDICTED: sigma factor sigB regulation protein rsbQ [Vitis
           vinifera] gi|147783136|emb|CAN70905.1| hypothetical
           protein VITISV_044176 [Vitis vinifera]
           gi|147795384|emb|CAN74235.1| hypothetical protein
           VITISV_040226 [Vitis vinifera]
          Length = 270

 Score =  441 bits (1134), Expect = e-121
 Identities = 209/268 (77%), Positives = 240/268 (89%)
 Frame = +3

Query: 51  MGVVEEAHNVKVLGSGHRTVVLAHGFGTDQSVWKHLVPHLVEDYKVVLFDTMGAGTTNPE 230
           MG+VEEAHN+KV+GSG + +VLAHGFGTDQS+WKHLVPHLV+DY+V+LFD MGAGTTNPE
Sbjct: 1   MGIVEEAHNLKVVGSGEQIIVLAHGFGTDQSLWKHLVPHLVDDYRVILFDNMGAGTTNPE 60

Query: 231 YFDFQRYATLEGYAYDVIGILEELRVSSCIFVGHSVSAMIGAVASITRPDLFSKLVMISA 410
           YFDF+RY+ LEGYAYDV+ ILEEL+V SCIFVGHSVSAMIGA+ASITRPDLFSKL+ I+ 
Sbjct: 61  YFDFERYSNLEGYAYDVLAILEELQVQSCIFVGHSVSAMIGAIASITRPDLFSKLISING 120

Query: 411 SPRYLNDVDYFGGYEQEDLNQLFEAMQSNFKAWCSGFAPLAVGGDMESVSVQEFSRTLFN 590
           SPRYLNDVDY+GG+EQEDL+QLFEAM SN+KAWCSGFAPLAVGGDM+SV+VQEFSRTLFN
Sbjct: 121 SPRYLNDVDYYGGFEQEDLDQLFEAMGSNYKAWCSGFAPLAVGGDMDSVAVQEFSRTLFN 180

Query: 591 MRPDIALSVAQTIFQSDMRHLLCHVLVPCHIIQSMKDMAVPVVVSEYLHQNLGGESIVEV 770
           MRPDIALSVAQTIFQ D+R +LCHV VPCHI+QS+KD+AVPVVVSEYLHQNLGGESIVEV
Sbjct: 181 MRPDIALSVAQTIFQVDLRQILCHVTVPCHILQSIKDLAVPVVVSEYLHQNLGGESIVEV 240

Query: 771 MSTEGHXXXXXXXXXXXXXXXRHIRCDI 854
           M+++GH               RHIR +I
Sbjct: 241 MTSDGHLPQLSSPDIVVPVLLRHIRYNI 268


>gb|AFK41000.1| unknown [Medicago truncatula]
          Length = 270

 Score =  435 bits (1118), Expect = e-119
 Identities = 207/269 (76%), Positives = 240/269 (89%)
 Frame = +3

Query: 51  MGVVEEAHNVKVLGSGHRTVVLAHGFGTDQSVWKHLVPHLVEDYKVVLFDTMGAGTTNPE 230
           MG+VEEAHNVKVLGSG R +VLAHGFGTDQSVWKHLVPHL+++++V+L+D MGAGTTNP+
Sbjct: 1   MGIVEEAHNVKVLGSGSRFIVLAHGFGTDQSVWKHLVPHLLDEFRVILYDNMGAGTTNPD 60

Query: 231 YFDFQRYATLEGYAYDVIGILEELRVSSCIFVGHSVSAMIGAVASITRPDLFSKLVMISA 410
           YFDF+RY+TLEGYAYD++ ILEELRV SCIFVGHSVSAMIG VASI+RPDLF+K+++ISA
Sbjct: 61  YFDFERYSTLEGYAYDLLAILEELRVDSCIFVGHSVSAMIGTVASISRPDLFNKIILISA 120

Query: 411 SPRYLNDVDYFGGYEQEDLNQLFEAMQSNFKAWCSGFAPLAVGGDMESVSVQEFSRTLFN 590
           SPRYLND DYFGG+EQEDL+QLF+AM SN+K+WCSGFAP+AVGGDMESV+VQEFSRTLFN
Sbjct: 121 SPRYLNDRDYFGGFEQEDLDQLFDAMASNYKSWCSGFAPMAVGGDMESVAVQEFSRTLFN 180

Query: 591 MRPDIALSVAQTIFQSDMRHLLCHVLVPCHIIQSMKDMAVPVVVSEYLHQNLGGESIVEV 770
           MRPDIALSV QTIF+SDMR +LC V VPCHIIQSMKD+AVPVVV+EYLHQ++G ESIVEV
Sbjct: 181 MRPDIALSVLQTIFKSDMRQILCMVTVPCHIIQSMKDLAVPVVVAEYLHQHVGSESIVEV 240

Query: 771 MSTEGHXXXXXXXXXXXXXXXRHIRCDIA 857
           MSTEGH               +HIR DIA
Sbjct: 241 MSTEGHLPQLSSPDVVVPVILKHIRHDIA 269


>ref|XP_002524966.1| sigma factor sigb regulation protein rsbq, putative [Ricinus
           communis] gi|223535801|gb|EEF37463.1| sigma factor sigb
           regulation protein rsbq, putative [Ricinus communis]
          Length = 270

 Score =  435 bits (1118), Expect = e-119
 Identities = 208/268 (77%), Positives = 238/268 (88%)
 Frame = +3

Query: 51  MGVVEEAHNVKVLGSGHRTVVLAHGFGTDQSVWKHLVPHLVEDYKVVLFDTMGAGTTNPE 230
           MG+VEEAHNVK+LG+G + +VLAHGFGTDQSVWKHLVPHL++D+KVVLFD MGAGTTNP+
Sbjct: 1   MGIVEEAHNVKILGTGEQVIVLAHGFGTDQSVWKHLVPHLIDDFKVVLFDNMGAGTTNPD 60

Query: 231 YFDFQRYATLEGYAYDVIGILEELRVSSCIFVGHSVSAMIGAVASITRPDLFSKLVMISA 410
           YFDF+RYA LEGYAYD++ ILEEL+V SC+FVGHSVSAM+G VASI+RPDLF+K+VMISA
Sbjct: 61  YFDFERYAGLEGYAYDLLAILEELQVESCVFVGHSVSAMVGVVASISRPDLFTKIVMISA 120

Query: 411 SPRYLNDVDYFGGYEQEDLNQLFEAMQSNFKAWCSGFAPLAVGGDMESVSVQEFSRTLFN 590
           SPRYLNDVDY+GG+EQEDLNQLFEAM++N+KAWCSGFAPLAVGGDM+SV+VQEFSRTLFN
Sbjct: 121 SPRYLNDVDYYGGFEQEDLNQLFEAMEANYKAWCSGFAPLAVGGDMDSVAVQEFSRTLFN 180

Query: 591 MRPDIALSVAQTIFQSDMRHLLCHVLVPCHIIQSMKDMAVPVVVSEYLHQNLGGESIVEV 770
           MRPDIALSVAQTIFQSDMR +L  V VPCHI+QS KD+AVPVVVSEYLHQNLG ESI EV
Sbjct: 181 MRPDIALSVAQTIFQSDMRSILHMVSVPCHIVQSGKDLAVPVVVSEYLHQNLGSESIAEV 240

Query: 771 MSTEGHXXXXXXXXXXXXXXXRHIRCDI 854
           MST+GH               RHIR +I
Sbjct: 241 MSTDGHLPQLSSPDVVIPVLLRHIRHNI 268


>ref|XP_003608457.1| Sigma factor sigB regulation protein rsbQ [Medicago truncatula]
           gi|355509512|gb|AES90654.1| Sigma factor sigB regulation
           protein rsbQ [Medicago truncatula]
          Length = 270

 Score =  435 bits (1118), Expect = e-119
 Identities = 207/269 (76%), Positives = 240/269 (89%)
 Frame = +3

Query: 51  MGVVEEAHNVKVLGSGHRTVVLAHGFGTDQSVWKHLVPHLVEDYKVVLFDTMGAGTTNPE 230
           MG+VEEAHNVKVLGSG R +VLAHGFGTDQSVWKHLVPHL+++++V+L+D MGAGTTNP+
Sbjct: 1   MGIVEEAHNVKVLGSGSRFIVLAHGFGTDQSVWKHLVPHLLDEFRVILYDNMGAGTTNPD 60

Query: 231 YFDFQRYATLEGYAYDVIGILEELRVSSCIFVGHSVSAMIGAVASITRPDLFSKLVMISA 410
           YFDF+RY+TLEGYAYD++ ILEELRV SCIFVGHSVSAMIG VASI+RPDLF+K+++ISA
Sbjct: 61  YFDFERYSTLEGYAYDLLAILEELRVDSCIFVGHSVSAMIGTVASISRPDLFNKIILISA 120

Query: 411 SPRYLNDVDYFGGYEQEDLNQLFEAMQSNFKAWCSGFAPLAVGGDMESVSVQEFSRTLFN 590
           SPRYLND DYFGG+EQEDL+QLF+AM SN+K+WCSGFAP+AVGGDMESV+VQEFSRTLFN
Sbjct: 121 SPRYLNDRDYFGGFEQEDLDQLFDAMASNYKSWCSGFAPMAVGGDMESVAVQEFSRTLFN 180

Query: 591 MRPDIALSVAQTIFQSDMRHLLCHVLVPCHIIQSMKDMAVPVVVSEYLHQNLGGESIVEV 770
           MRPDIALSV QTIF+SDMR +LC V VPCHIIQSMKD+AVPVVV+EYLHQ++G ESIVEV
Sbjct: 181 MRPDIALSVLQTIFKSDMRQILCMVTVPCHIIQSMKDLAVPVVVAEYLHQHVGSESIVEV 240

Query: 771 MSTEGHXXXXXXXXXXXXXXXRHIRCDIA 857
           MSTEGH               +HIR DIA
Sbjct: 241 MSTEGHLPQLSSPDVVIPVILKHIRHDIA 269


>ref|XP_002303383.1| predicted protein [Populus trichocarpa] gi|118489325|gb|ABK96467.1|
           unknown [Populus trichocarpa x Populus deltoides]
           gi|222840815|gb|EEE78362.1| predicted protein [Populus
           trichocarpa]
          Length = 270

 Score =  429 bits (1103), Expect = e-118
 Identities = 202/269 (75%), Positives = 238/269 (88%)
 Frame = +3

Query: 51  MGVVEEAHNVKVLGSGHRTVVLAHGFGTDQSVWKHLVPHLVEDYKVVLFDTMGAGTTNPE 230
           MG+VEEAHN K+LGSG + +VLAHGFGTDQSVWKHL+PH+V++YKV+L+D MGAGTTNP+
Sbjct: 1   MGIVEEAHNAKILGSGEQVIVLAHGFGTDQSVWKHLIPHIVDEYKVILYDNMGAGTTNPD 60

Query: 231 YFDFQRYATLEGYAYDVIGILEELRVSSCIFVGHSVSAMIGAVASITRPDLFSKLVMISA 410
           YFDF RY++LEGYAYD++ ILEEL+V SCI V HSVS +IGA+ASI+RPDLFSK+VM+SA
Sbjct: 61  YFDFNRYSSLEGYAYDLLAILEELKVESCILVAHSVSGIIGAIASISRPDLFSKIVMLSA 120

Query: 411 SPRYLNDVDYFGGYEQEDLNQLFEAMQSNFKAWCSGFAPLAVGGDMESVSVQEFSRTLFN 590
           SPRYLNDVDY+GG+EQEDL+QLFEAMQ+N+KAWCSGFAPLAVGGDM+SV+VQEFSRTLFN
Sbjct: 121 SPRYLNDVDYYGGFEQEDLDQLFEAMQNNYKAWCSGFAPLAVGGDMDSVAVQEFSRTLFN 180

Query: 591 MRPDIALSVAQTIFQSDMRHLLCHVLVPCHIIQSMKDMAVPVVVSEYLHQNLGGESIVEV 770
           MRPDIALSVAQTIFQSDMR +L  V VPCHI+QSMKD+AVPVV +EYLHQNLGGESIVEV
Sbjct: 181 MRPDIALSVAQTIFQSDMRSILHMVTVPCHILQSMKDLAVPVVAAEYLHQNLGGESIVEV 240

Query: 771 MSTEGHXXXXXXXXXXXXXXXRHIRCDIA 857
           MS++GH               +HIR +IA
Sbjct: 241 MSSDGHLPQLSSPDIVIPVLLKHIRYNIA 269


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