BLASTX nr result

ID: Atractylodes22_contig00011534 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00011534
         (894 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266832.1| PREDICTED: AP-3 complex subunit sigma [Vitis...   255   1e-65
ref|XP_004142366.1| PREDICTED: AP-3 complex subunit sigma-like [...   249   8e-64
ref|NP_190655.2| AP-3 complex subunit sigma [Arabidopsis thalian...   247   3e-63
ref|XP_002876049.1| clathrin adaptor complex small chain family ...   245   9e-63
ref|XP_002521592.1| AP-3 complex subunit sigma-1, putative [Rici...   244   2e-62

>ref|XP_002266832.1| PREDICTED: AP-3 complex subunit sigma [Vitis vinifera]
           gi|297735157|emb|CBI17519.3| unnamed protein product
           [Vitis vinifera]
          Length = 165

 Score =  255 bits (651), Expect = 1e-65
 Identities = 123/164 (75%), Positives = 146/164 (89%)
 Frame = -1

Query: 837 MIRAVIVMNDQGKPRLVKFYEHQPVEKQQEIIRSIYGVLCSRAENVSNFVQADSTFGPDT 658
           MIRAVIVMN QGKPRL KFY++ P EKQQE+IR ++GVLCSRAENVSNFV+ADS FGPDT
Sbjct: 1   MIRAVIVMNTQGKPRLTKFYDYMPPEKQQELIRRVFGVLCSRAENVSNFVEADSVFGPDT 60

Query: 657 RLVYKTFATLYFIVIFDDSENELAILDLMQVFVETLDKCFSNVCELDLVFNFNKVHTILD 478
           RLVYK +ATLYF+ +FD SENELA+LDL+QV VETLDKCF NVCELD+VFN++K+HTILD
Sbjct: 61  RLVYKHYATLYFVFVFDSSENELAMLDLIQVLVETLDKCFKNVCELDIVFNYSKLHTILD 120

Query: 477 EIILGGQVVEMSSSEVVKAVDDISWLERNSNSILGVPKSMSGWQ 346
           EII GGQV+E SS+EV+KAV++IS LE  SN+I  VPKS+SGW+
Sbjct: 121 EIIFGGQVLETSSAEVMKAVEEISRLETASNTITLVPKSISGWR 164


>ref|XP_004142366.1| PREDICTED: AP-3 complex subunit sigma-like [Cucumis sativus]
           gi|449521621|ref|XP_004167828.1| PREDICTED: AP-3 complex
           subunit sigma-like [Cucumis sativus]
          Length = 165

 Score =  249 bits (635), Expect = 8e-64
 Identities = 121/165 (73%), Positives = 146/165 (88%)
 Frame = -1

Query: 837 MIRAVIVMNDQGKPRLVKFYEHQPVEKQQEIIRSIYGVLCSRAENVSNFVQADSTFGPDT 658
           MIR+VIVMN +GKPR  KFY+ QP+EKQQE+IRS+YGVLCSRAENVSNFV+ +S FG D+
Sbjct: 1   MIRSVIVMNTEGKPRFAKFYDFQPIEKQQELIRSVYGVLCSRAENVSNFVETESIFGLDS 60

Query: 657 RLVYKTFATLYFIVIFDDSENELAILDLMQVFVETLDKCFSNVCELDLVFNFNKVHTILD 478
            LVYK FATLYF+++F+ SENELA+LDL+QVFVETLDKCF NVCELDLVFN++K+HTILD
Sbjct: 61  HLVYKHFATLYFVLVFNSSENELAMLDLIQVFVETLDKCFKNVCELDLVFNYSKMHTILD 120

Query: 477 EIILGGQVVEMSSSEVVKAVDDISWLERNSNSILGVPKSMSGWQG 343
           EII GGQV+E SSSEV+KAV++IS LE  SNSI  V K++SGW+G
Sbjct: 121 EIISGGQVLETSSSEVMKAVEEISKLETASNSINFVSKTVSGWRG 165


>ref|NP_190655.2| AP-3 complex subunit sigma [Arabidopsis thaliana]
           gi|75161581|sp|Q8VZ37.1|AP3S_ARATH RecName: Full=AP-3
           complex subunit sigma; AltName: Full=AP-3 complex
           subunit sigma-3; AltName: Full=Adapter-related protein
           complex 3 sigma subunit; AltName: Full=Sigma-adaptin 3;
           AltName: Full=Sigma3-adaptin gi|17529106|gb|AAL38763.1|
           putative clathrin coat assembly protein [Arabidopsis
           thaliana] gi|20465749|gb|AAM20343.1| putative clathrin
           coat assembly protein [Arabidopsis thaliana]
           gi|332645198|gb|AEE78719.1| AP-3 complex subunit sigma
           [Arabidopsis thaliana]
          Length = 166

 Score =  247 bits (630), Expect = 3e-63
 Identities = 116/166 (69%), Positives = 147/166 (88%)
 Frame = -1

Query: 837 MIRAVIVMNDQGKPRLVKFYEHQPVEKQQEIIRSIYGVLCSRAENVSNFVQADSTFGPDT 658
           MI+AV++MN QGKPRL KFY++ PVEKQQE+IR ++ VLCSR ENVSNF++ +S FGPD+
Sbjct: 1   MIKAVMMMNTQGKPRLAKFYDYLPVEKQQELIRGVFSVLCSRPENVSNFLEIESLFGPDS 60

Query: 657 RLVYKTFATLYFIVIFDDSENELAILDLMQVFVETLDKCFSNVCELDLVFNFNKVHTILD 478
           RLVYK +ATLYF+++FD SENELA+LDL+QV VETLDKCFSNVCELD+VFN++K+H +LD
Sbjct: 61  RLVYKHYATLYFVLVFDGSENELAMLDLIQVLVETLDKCFSNVCELDIVFNYSKMHAVLD 120

Query: 477 EIILGGQVVEMSSSEVVKAVDDISWLERNSNSILGVPKSMSGWQGR 340
           EI+ GGQV+E SS+EV+KAV++IS LE  SNSI  VPKS+SGW+GR
Sbjct: 121 EIVFGGQVLETSSAEVMKAVEEISKLEAASNSISLVPKSVSGWRGR 166


>ref|XP_002876049.1| clathrin adaptor complex small chain family protein [Arabidopsis
           lyrata subsp. lyrata] gi|297321887|gb|EFH52308.1|
           clathrin adaptor complex small chain family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 166

 Score =  245 bits (626), Expect = 9e-63
 Identities = 115/166 (69%), Positives = 146/166 (87%)
 Frame = -1

Query: 837 MIRAVIVMNDQGKPRLVKFYEHQPVEKQQEIIRSIYGVLCSRAENVSNFVQADSTFGPDT 658
           MI+AV+++N QGKPRL KFY++ PVEKQQE+IR ++ VLCSR ENVSNF++ DS FGP +
Sbjct: 1   MIKAVMMLNTQGKPRLAKFYDYMPVEKQQELIRGVFSVLCSRPENVSNFLEIDSLFGPFS 60

Query: 657 RLVYKTFATLYFIVIFDDSENELAILDLMQVFVETLDKCFSNVCELDLVFNFNKVHTILD 478
           RLVYK +ATLYF+++FD SENELA+LDL+QV VETLDKCFSNVCELD+VFN++K+H +LD
Sbjct: 61  RLVYKHYATLYFVLVFDGSENELAMLDLIQVLVETLDKCFSNVCELDIVFNYSKMHAVLD 120

Query: 477 EIILGGQVVEMSSSEVVKAVDDISWLERNSNSILGVPKSMSGWQGR 340
           EI+ GGQV+E SS+EV+KAV++IS LE  SNSI  VPKS+SGW+GR
Sbjct: 121 EIVFGGQVLETSSAEVIKAVEEISKLEAASNSISLVPKSVSGWRGR 166


>ref|XP_002521592.1| AP-3 complex subunit sigma-1, putative [Ricinus communis]
           gi|223539270|gb|EEF40863.1| AP-3 complex subunit
           sigma-1, putative [Ricinus communis]
          Length = 166

 Score =  244 bits (623), Expect = 2e-62
 Identities = 116/166 (69%), Positives = 146/166 (87%)
 Frame = -1

Query: 837 MIRAVIVMNDQGKPRLVKFYEHQPVEKQQEIIRSIYGVLCSRAENVSNFVQADSTFGPDT 658
           MI+AV+VMN QGKPRL KFY+   VEKQQE+IRS++GVLCSRAENVSNF++ADS FGPD+
Sbjct: 1   MIKAVLVMNTQGKPRLAKFYDFLSVEKQQELIRSVFGVLCSRAENVSNFMEADSIFGPDS 60

Query: 657 RLVYKTFATLYFIVIFDDSENELAILDLMQVFVETLDKCFSNVCELDLVFNFNKVHTILD 478
           RLVYK +ATLYF+ ++D  ENELA+LDL+QVFVETLDKCF NVCELD+VFN++K+HTILD
Sbjct: 61  RLVYKHYATLYFVFVYDSCENELAVLDLIQVFVETLDKCFRNVCELDIVFNYSKLHTILD 120

Query: 477 EIILGGQVVEMSSSEVVKAVDDISWLERNSNSILGVPKSMSGWQGR 340
           EII GGQV+E SS+EV+KAV++IS LE +S S+  VPK+++ W+ R
Sbjct: 121 EIIFGGQVLETSSTEVMKAVEEISKLEASSYSMTLVPKTVASWRNR 166


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