BLASTX nr result

ID: Atractylodes22_contig00010945 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00010945
         (858 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29999.3| unnamed protein product [Vitis vinifera]              222   1e-55
ref|XP_002275839.1| PREDICTED: gamma-tubulin complex component 3...   222   1e-55
ref|XP_002532346.1| gamma-tubulin complex component, putative [R...   214   3e-53
ref|XP_002309295.1| tubulin gamma complex-associated protein [Po...   207   2e-51
ref|XP_002322735.1| tubulin gamma complex-associated protein [Po...   204   2e-50

>emb|CBI29999.3| unnamed protein product [Vitis vinifera]
          Length = 777

 Score =  222 bits (565), Expect = 1e-55
 Identities = 114/165 (69%), Positives = 132/165 (80%), Gaps = 6/165 (3%)
 Frame = -3

Query: 856  EVSWANFSDEMEASXXXXXXXXXXXXXXHSIVEKSLLGERSQALYKTLFMLFDLILRFRS 677
            EVSW+NFS+EMEA+              +SIVEKSLLGERSQ LYKTLF+LFDLILRFRS
Sbjct: 606  EVSWSNFSNEMEAAKDLDDLLAAHDKYLNSIVEKSLLGERSQNLYKTLFVLFDLILRFRS 665

Query: 676  HADRLYEGIYEFQARTME------DKTELPRHSKSKSADSDSWLSEGRKALTQRAGEFLQ 515
            H DRLYEGI+E Q+RTME      DKT   R    K+A+  +W+S+GRKALTQRAGEFL+
Sbjct: 666  HVDRLYEGIHELQSRTMESLSPSRDKTRSRRLLNDKTAEPGAWISDGRKALTQRAGEFLR 725

Query: 514  NMGQDIDAVSKEYSSLFKGFISQLPVQQHIDLKFLMFRLDFTEFY 380
            NMGQD+DA++KEYSSL +GFISQLPVQQHIDLKFL+FRLDFTEFY
Sbjct: 726  NMGQDLDAIAKEYSSLLEGFISQLPVQQHIDLKFLLFRLDFTEFY 770


>ref|XP_002275839.1| PREDICTED: gamma-tubulin complex component 3 homolog [Vitis vinifera]
          Length = 854

 Score =  222 bits (565), Expect = 1e-55
 Identities = 114/165 (69%), Positives = 132/165 (80%), Gaps = 6/165 (3%)
 Frame = -3

Query: 856  EVSWANFSDEMEASXXXXXXXXXXXXXXHSIVEKSLLGERSQALYKTLFMLFDLILRFRS 677
            EVSW+NFS+EMEA+              +SIVEKSLLGERSQ LYKTLF+LFDLILRFRS
Sbjct: 683  EVSWSNFSNEMEAAKDLDDLLAAHDKYLNSIVEKSLLGERSQNLYKTLFVLFDLILRFRS 742

Query: 676  HADRLYEGIYEFQARTME------DKTELPRHSKSKSADSDSWLSEGRKALTQRAGEFLQ 515
            H DRLYEGI+E Q+RTME      DKT   R    K+A+  +W+S+GRKALTQRAGEFL+
Sbjct: 743  HVDRLYEGIHELQSRTMESLSPSRDKTRSRRLLNDKTAEPGAWISDGRKALTQRAGEFLR 802

Query: 514  NMGQDIDAVSKEYSSLFKGFISQLPVQQHIDLKFLMFRLDFTEFY 380
            NMGQD+DA++KEYSSL +GFISQLPVQQHIDLKFL+FRLDFTEFY
Sbjct: 803  NMGQDLDAIAKEYSSLLEGFISQLPVQQHIDLKFLLFRLDFTEFY 847


>ref|XP_002532346.1| gamma-tubulin complex component, putative [Ricinus communis]
            gi|223527963|gb|EEF30048.1| gamma-tubulin complex
            component, putative [Ricinus communis]
          Length = 855

 Score =  214 bits (544), Expect = 3e-53
 Identities = 108/165 (65%), Positives = 131/165 (79%), Gaps = 6/165 (3%)
 Frame = -3

Query: 856  EVSWANFSDEMEASXXXXXXXXXXXXXXHSIVEKSLLGERSQALYKTLFMLFDLILRFRS 677
            EVSW++FS++ME +              HSIVEKSLLGERSQ LYK+LF+LFDLILRFRS
Sbjct: 684  EVSWSDFSNDMEVARDLDDLLAAHEKYLHSIVEKSLLGERSQLLYKSLFVLFDLILRFRS 743

Query: 676  HADRLYEGIYEFQARTM------EDKTELPRHSKSKSADSDSWLSEGRKALTQRAGEFLQ 515
            HADRLYEGI+E QARTM      +DK +  R +  KS++  SW+S+GRKALTQRAGEFLQ
Sbjct: 744  HADRLYEGIHELQARTMASTLPSQDKKKSRRQATDKSSEPGSWISDGRKALTQRAGEFLQ 803

Query: 514  NMGQDIDAVSKEYSSLFKGFISQLPVQQHIDLKFLMFRLDFTEFY 380
            NMG ++D V+KEY++L KGF+SQLPVQQH+DLKFL+FRLDFTEFY
Sbjct: 804  NMGHELDTVAKEYTTLLKGFLSQLPVQQHVDLKFLLFRLDFTEFY 848


>ref|XP_002309295.1| tubulin gamma complex-associated protein [Populus trichocarpa]
            gi|222855271|gb|EEE92818.1| tubulin gamma
            complex-associated protein [Populus trichocarpa]
          Length = 860

 Score =  207 bits (527), Expect = 2e-51
 Identities = 105/165 (63%), Positives = 127/165 (76%), Gaps = 6/165 (3%)
 Frame = -3

Query: 856  EVSWANFSDEMEASXXXXXXXXXXXXXXHSIVEKSLLGERSQALYKTLFMLFDLILRFRS 677
            EVSW+NFS+EME +              HSIVEKSLLGERSQ+LYK+LF+LFDLIL FRS
Sbjct: 689  EVSWSNFSNEMEVAKDLDDLLAAHDKYLHSIVEKSLLGERSQSLYKSLFVLFDLILHFRS 748

Query: 676  HADRLYEGIYEFQARTM------EDKTELPRHSKSKSADSDSWLSEGRKALTQRAGEFLQ 515
            HADRL EGIYE QART       +DKT+  RH++   ++  SW S+GRKAL QRAGEFLQ
Sbjct: 749  HADRLCEGIYELQARTRASSLSSQDKTKSRRHTRDNPSEPGSWFSDGRKALEQRAGEFLQ 808

Query: 514  NMGQDIDAVSKEYSSLFKGFISQLPVQQHIDLKFLMFRLDFTEFY 380
            NMG++++ +SKEY+ L +GF+SQLPVQQH+DLKFL FRLDFTEFY
Sbjct: 809  NMGRELEEISKEYTVLLEGFLSQLPVQQHVDLKFLFFRLDFTEFY 853


>ref|XP_002322735.1| tubulin gamma complex-associated protein [Populus trichocarpa]
            gi|222867365|gb|EEF04496.1| tubulin gamma
            complex-associated protein [Populus trichocarpa]
          Length = 844

 Score =  204 bits (520), Expect = 2e-50
 Identities = 102/159 (64%), Positives = 125/159 (78%)
 Frame = -3

Query: 856  EVSWANFSDEMEASXXXXXXXXXXXXXXHSIVEKSLLGERSQALYKTLFMLFDLILRFRS 677
            EVSW+NFS+EME +              HSIVEKSLLGERSQ+LYK+LF+LFDLILRFRS
Sbjct: 686  EVSWSNFSNEMEVARDLDDLLAAHDKYLHSIVEKSLLGERSQSLYKSLFVLFDLILRFRS 745

Query: 676  HADRLYEGIYEFQARTMEDKTELPRHSKSKSADSDSWLSEGRKALTQRAGEFLQNMGQDI 497
            HADRLYEGIYE Q R+        R +K KS++ +SWL++GRKAL +RAGEFLQNMGQ++
Sbjct: 746  HADRLYEGIYELQTRSR-------RQTKDKSSEPESWLNDGRKALEERAGEFLQNMGQEL 798

Query: 496  DAVSKEYSSLFKGFISQLPVQQHIDLKFLMFRLDFTEFY 380
            + +SKEY+ L +GF+SQLP+QQH+DLKFL FRLDF EFY
Sbjct: 799  ETISKEYTVLLEGFLSQLPMQQHVDLKFLFFRLDFAEFY 837


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