BLASTX nr result

ID: Atractylodes22_contig00010879 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00010879
         (1156 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|D9J034.1|WHY2_SOLTU RecName: Full=Single-stranded DNA-bindig ...   276   9e-72
gb|ABK94132.1| unknown [Populus trichocarpa]                          257   4e-66
ref|XP_002303313.1| predicted protein [Populus trichocarpa] gi|2...   249   9e-64
ref|XP_003554728.1| PREDICTED: uncharacterized protein LOC100817...   248   2e-63
gb|ACU19178.1| unknown [Glycine max]                                  245   2e-62

>sp|D9J034.1|WHY2_SOLTU RecName: Full=Single-stranded DNA-bindig protein WHY2,
           mitochondrial; AltName: Full=Protein WHIRLY 2;
           Short=StWHY2; Flags: Precursor
           gi|298359665|gb|ADI77438.1| Why2 protein [Solanum
           tuberosum]
          Length = 238

 Score =  276 bits (705), Expect = 9e-72
 Identities = 153/238 (64%), Positives = 180/238 (75%), Gaps = 7/238 (2%)
 Frame = +1

Query: 58  LKLSHLLNSGNNMLKHRLLGESV-GSCSK--LMSSAGISTARQTY--GAGKLSGRIFADY 222
           LK+S LL+  N +L  +L GE V GS  +  + + AG ST RQ     AGK  GR+FA Y
Sbjct: 2   LKVSRLLHPRNQLLHKKLPGECVKGSIWQHAINTFAGFSTVRQNVVADAGKREGRVFAPY 61

Query: 223 SIFKGKAALSAAPVLPTFSKLNSGHTKVDRRGTIMLTFRPAIGERKYDSEKKQLFALSVT 402
           S+FKGKAALSA P LPTF++L+SG  K++RRG IMLTF P++GERKYD EK+QLFALS T
Sbjct: 62  SVFKGKAALSAEPRLPTFNRLDSGGVKLNRRGVIMLTFWPSVGERKYDWEKRQLFALSAT 121

Query: 403 EIGSFISLGPGDSCEFFHDPSMQSRDAGQVRKSLSIKPHTD--GYFISLSVTNNILKTNE 576
           E+GS IS+G  DS EFFHDPSM S +AGQVRKSLSIKP+ D  GYFISLSV NN LKTN+
Sbjct: 122 EVGSLISMGTRDSSEFFHDPSMLSSNAGQVRKSLSIKPNADGSGYFISLSVVNNNLKTND 181

Query: 577 RFTVPVTTAEFAVLRAAFTFALPHIMGWAHSTNQLLDSVGQDSLKVHPQLAAASEWDR 750
           RFTVPVTTAEFAV+R AF+FALPHIMGW   TN+  +S+ Q   KV PQL  A EWDR
Sbjct: 182 RFTVPVTTAEFAVMRTAFSFALPHIMGWDRFTNRPSESISQSPSKVVPQLMEA-EWDR 238


>gb|ABK94132.1| unknown [Populus trichocarpa]
          Length = 229

 Score =  257 bits (656), Expect = 4e-66
 Identities = 139/233 (59%), Positives = 160/233 (68%), Gaps = 2/233 (0%)
 Frame = +1

Query: 58  LKLSHLLNSGNNMLKHRLLGESVGSCSKLMSSAGISTARQTYGAGKLSGRIFADYSIFKG 237
           +KLS  LN   N +          +   L   A IST     G   +  R+FA YS+FKG
Sbjct: 2   MKLSRFLNFNRNAVGKPTDVRDGSALHALTFQASISTG----GKSSIQDRVFAPYSVFKG 57

Query: 238 KAALSAAPVLPTFSKLNSGHTKVDRRGTIMLTFRPAIGERKYDSEKKQLFALSVTEIGSF 417
           KAALS  PVLPTFSK  SG+ +VDRRG++MLTF PAIGERKYD EK+Q FALS TE+GS 
Sbjct: 58  KAALSVEPVLPTFSKFGSGNLRVDRRGSMMLTFLPAIGERKYDYEKRQKFALSATEVGSL 117

Query: 418 ISLGPGDSCEFFHDPSMQSRDAGQVRKSLSIKPHTD--GYFISLSVTNNILKTNERFTVP 591
           IS GP DSCEFFHDPSM S +AGQVRK+LSIKPH D  GYF+SLSV NNILKT ERFTVP
Sbjct: 118 ISTGPKDSCEFFHDPSMLSSNAGQVRKNLSIKPHADGSGYFVSLSVVNNILKTTERFTVP 177

Query: 592 VTTAEFAVLRAAFTFALPHIMGWAHSTNQLLDSVGQDSLKVHPQLAAASEWDR 750
           VTTAEF VL+ A +FALPHIMGW   T  L  ++     KV PQ+    EWD+
Sbjct: 178 VTTAEFTVLKTACSFALPHIMGWDRLTTPLPGTLASKLSKVDPQMPDL-EWDK 229


>ref|XP_002303313.1| predicted protein [Populus trichocarpa] gi|222840745|gb|EEE78292.1|
           predicted protein [Populus trichocarpa]
          Length = 183

 Score =  249 bits (636), Expect = 9e-64
 Identities = 127/184 (69%), Positives = 144/184 (78%), Gaps = 2/184 (1%)
 Frame = +1

Query: 205 RIFADYSIFKGKAALSAAPVLPTFSKLNSGHTKVDRRGTIMLTFRPAIGERKYDSEKKQL 384
           R+FA YS+FKGKAALS  PVLPTFSK  SG+ +VDRRG++MLTF PAIGERKYD EK+Q 
Sbjct: 1   RVFAPYSVFKGKAALSVEPVLPTFSKFGSGNLRVDRRGSMMLTFLPAIGERKYDYEKRQK 60

Query: 385 FALSVTEIGSFISLGPGDSCEFFHDPSMQSRDAGQVRKSLSIKPHTD--GYFISLSVTNN 558
           FALS TE+GS IS GP DSCEFFHDPSM S +AGQVRK+LSIKPH D  GYF+SLSV NN
Sbjct: 61  FALSATEVGSLISTGPKDSCEFFHDPSMLSSNAGQVRKNLSIKPHADGSGYFVSLSVVNN 120

Query: 559 ILKTNERFTVPVTTAEFAVLRAAFTFALPHIMGWAHSTNQLLDSVGQDSLKVHPQLAAAS 738
           ILKT ERFTVPVTTAEF VL+ A +FALPHIMGW   T  L  ++     KV PQ+    
Sbjct: 121 ILKTTERFTVPVTTAEFTVLKTACSFALPHIMGWDRLTTPLPGTLASKLSKVDPQMPDL- 179

Query: 739 EWDR 750
           EWD+
Sbjct: 180 EWDK 183


>ref|XP_003554728.1| PREDICTED: uncharacterized protein LOC100817863 [Glycine max]
          Length = 235

 Score =  248 bits (634), Expect = 2e-63
 Identities = 137/236 (58%), Positives = 167/236 (70%), Gaps = 6/236 (2%)
 Frame = +1

Query: 61  KLSHLLNSGNNMLKHRLL----GESVGSCSKLMSSAGISTARQTYGA-GKLSGRIFADYS 225
           KLS +L   +   +HRLL       V    +L  SAGISTA   Y A G  S RIFA Y+
Sbjct: 3   KLSRMLPLTSTS-RHRLLEVLSSRKVEVGDRLSHSAGISTATNNYAAKGYASDRIFAPYT 61

Query: 226 IFKGKAALSAAPVLPTFSKLNSGHTKVDRRGTIMLTFRPAIGERKYDSEKKQLFALSVTE 405
           ++KGKAA S  P LPTF+KLNSG   VDRRG+IM+TF  +IGERKYD EK+Q FALS TE
Sbjct: 62  VYKGKAAFSLIPCLPTFTKLNSGTVVVDRRGSIMMTFMHSIGERKYDWEKRQRFALSATE 121

Query: 406 IGSFISLGPGDSCEFFHDPSMQSRDAGQVRKSLSIKPHTDGYFISLSVTNNILKTNERFT 585
           +GS I++G  DSC+FFHDPSM S +AGQVRKSLSIKPH +GYF+SL+V NN+L TN+ F+
Sbjct: 122 VGSLITMGAQDSCDFFHDPSMLSSNAGQVRKSLSIKPHANGYFVSLTVVNNLLNTNDYFS 181

Query: 586 VPVTTAEFAVLRAAFTFALPHIMGWAHSTNQLLDSVGQDSLKVHPQLAAAS-EWDR 750
           VPVTTAEFAV++ A +FALPHIMGW   TNQ   S G D L+V      +  EW++
Sbjct: 182 VPVTTAEFAVMKTACSFALPHIMGWDQITNQ--QSRGIDDLQVKGDSKVSDLEWEK 235


>gb|ACU19178.1| unknown [Glycine max]
          Length = 235

 Score =  245 bits (625), Expect = 2e-62
 Identities = 132/235 (56%), Positives = 166/235 (70%), Gaps = 5/235 (2%)
 Frame = +1

Query: 61  KLSHLLNSGNNMLKHRLL----GESVGSCSKLMSSAGISTARQTYGA-GKLSGRIFADYS 225
           KLS +L   +   +HRLL       V    +L  SAGIST    Y A G  S RIFA Y+
Sbjct: 3   KLSRMLPLTSTS-RHRLLEVLSSRKVEVGDRLSHSAGISTVTNNYAAKGYASDRIFAPYT 61

Query: 226 IFKGKAALSAAPVLPTFSKLNSGHTKVDRRGTIMLTFRPAIGERKYDSEKKQLFALSVTE 405
           ++KGKAA S  P LPTF+KLNSG   VDRRG+IM+TF  +IGERKYD EK+Q FALS TE
Sbjct: 62  VYKGKAAFSLIPCLPTFTKLNSGTVVVDRRGSIMMTFMHSIGERKYDWEKRQRFALSATE 121

Query: 406 IGSFISLGPGDSCEFFHDPSMQSRDAGQVRKSLSIKPHTDGYFISLSVTNNILKTNERFT 585
           +GS I++G  DSC+FFHDPSM S +AGQVRKSLSIKPH +GYF+SL+V +N+L TN+ F+
Sbjct: 122 VGSLITMGAQDSCDFFHDPSMLSSNAGQVRKSLSIKPHANGYFVSLTVVDNLLNTNDYFS 181

Query: 586 VPVTTAEFAVLRAAFTFALPHIMGWAHSTNQLLDSVGQDSLKVHPQLAAASEWDR 750
           VPVTTAEFAV++ A +FALPHIMGW   TNQ    +    +K  P+++   EW++
Sbjct: 182 VPVTTAEFAVMKTACSFALPHIMGWDQITNQQSRGIDDLQVKGDPKVSDL-EWEK 235


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