BLASTX nr result

ID: Atractylodes22_contig00010623 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00010623
         (828 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313384.1| predicted protein [Populus trichocarpa] gi|2...   326   4e-87
ref|XP_004168553.1| PREDICTED: uncharacterized LOC101203772, par...   312   7e-83
gb|AAM67171.1| RNA-binding protein-like protein [Arabidopsis tha...   312   7e-83
ref|XP_002525634.1| ubiquitin-protein ligase, putative [Ricinus ...   311   1e-82
ref|NP_190300.1| RING/U-box domain-containing protein [Arabidops...   311   1e-82

>ref|XP_002313384.1| predicted protein [Populus trichocarpa] gi|222849792|gb|EEE87339.1|
           predicted protein [Populus trichocarpa]
          Length = 243

 Score =  326 bits (835), Expect = 4e-87
 Identities = 150/220 (68%), Positives = 180/220 (81%)
 Frame = +2

Query: 2   ALSYPRDHDGASLQMRLSFSPAVDLFSFLFPWTDCKIAGALGLLRIFIYMTYADGKTTMC 181
           AL +PR++DGA LQMRLS+SPA   F FL  WTDC +AGALGLLRI IY+TYADGKTTM 
Sbjct: 24  ALDHPRENDGARLQMRLSYSPAAQFFLFLVQWTDCNLAGALGLLRILIYLTYADGKTTMS 83

Query: 182 VQERKASIKQFYDVIFPSILQLQSGITDLEERKQKDICSKRYSRKDGSDKGKLSDADAER 361
           VQERKASI++FY VIFPS+LQLQ GITD+++RKQK++C+ RY RKD  +KGKLS+ D ER
Sbjct: 84  VQERKASIREFYAVIFPSLLQLQGGITDVDDRKQKEVCTMRYRRKDELEKGKLSEVDIER 143

Query: 362 EIECGICMETNTRVVLPNCSHSLCFKCYRDWHGRSQSCPFCRDSLKEVNISDLWVCIEAG 541
           E ECGICME N +VVLP CSHSLC +CYRDW GRSQSCPFCR SLK VN  DLW+  E  
Sbjct: 144 EEECGICMEMNNKVVLPTCSHSLCLRCYRDWRGRSQSCPFCRGSLKRVNSGDLWIYAEKS 203

Query: 542 EIMDLSVIAKENKKRLFMYIEKLPLIIPGDISHPTDSHLK 661
           +++DL++I ++N KRLFMYI+KLPLIIP  +  P DSH+K
Sbjct: 204 DVVDLALITRQNCKRLFMYIDKLPLIIPDTVYMPYDSHVK 243


>ref|XP_004168553.1| PREDICTED: uncharacterized LOC101203772, partial [Cucumis sativus]
          Length = 220

 Score =  312 bits (799), Expect = 7e-83
 Identities = 144/220 (65%), Positives = 175/220 (79%)
 Frame = +2

Query: 2   ALSYPRDHDGASLQMRLSFSPAVDLFSFLFPWTDCKIAGALGLLRIFIYMTYADGKTTMC 181
           AL  PR+ DGA +QMRLS+SPA   F FL  WTDC +AGALGLLRI IY+TY DGKTTM 
Sbjct: 1   ALDCPRESDGACVQMRLSYSPAAPFFLFLVQWTDCYLAGALGLLRILIYVTYPDGKTTMS 60

Query: 182 VQERKASIKQFYDVIFPSILQLQSGITDLEERKQKDICSKRYSRKDGSDKGKLSDADAER 361
           + ERKASI++FY VIFPS+LQLQ GIT+LE+RKQK++C+ RYSR+D   +GKLS+ D ER
Sbjct: 61  IYERKASIREFYVVIFPSLLQLQKGITELEDRKQKEVCNARYSRRDEFGRGKLSEIDIER 120

Query: 362 EIECGICMETNTRVVLPNCSHSLCFKCYRDWHGRSQSCPFCRDSLKEVNISDLWVCIEAG 541
           E ECGICME N  VVLPNC+HSLC KCYRDW GRSQSCPFCRDSLK VN  DLW+  +  
Sbjct: 121 EKECGICMEFNGMVVLPNCNHSLCLKCYRDWRGRSQSCPFCRDSLKRVNSGDLWIFTDKS 180

Query: 542 EIMDLSVIAKENKKRLFMYIEKLPLIIPGDISHPTDSHLK 661
           E++DL+ I  +N+KRLF YI+KLPL++P  +  P DSH++
Sbjct: 181 EMIDLNSILHDNRKRLFAYIDKLPLVVPDPVFLPMDSHIR 220


>gb|AAM67171.1| RNA-binding protein-like protein [Arabidopsis thaliana]
          Length = 245

 Score =  312 bits (799), Expect = 7e-83
 Identities = 145/222 (65%), Positives = 173/222 (77%), Gaps = 2/222 (0%)
 Frame = +2

Query: 2   ALSYPRDHDGASLQMRLSFSPAVDLFSFLFPWTDCKIAGALGLLRIFIYMTYADGKTTMC 181
           AL YPR+ DGA +QMRLS++PA     FL  WTDC +AG LGLLR+ IYMTYADGKTTM 
Sbjct: 24  ALDYPREKDGARVQMRLSYTPAAQFLLFLVQWTDCHLAGTLGLLRVLIYMTYADGKTTMS 83

Query: 182 VQERKASIKQFYDVIFPSILQLQSGITDLEERKQKDICSKRYSRKDGSDKGKLSDADAER 361
           V ERK SIK FY VIFPS+LQL+ GITDL++RKQK++C  RY  KD S+K KLS+ D ER
Sbjct: 84  VYERKTSIKDFYAVIFPSLLQLERGITDLDDRKQKEVCKIRYRNKDESEKVKLSEIDIER 143

Query: 362 EIECGICMETNTRVVLPNCSHSLCFKCYRDWHGRSQSCPFCRDSLKEVNISDLWVCIEAG 541
           E ECGICME N  VVLPNC+HSLC KCYRDWHGRS+SCPFCRDSLK VN  DLW+ +E  
Sbjct: 144 EEECGICMEMNNMVVLPNCTHSLCIKCYRDWHGRSESCPFCRDSLKRVNSGDLWMLMEKS 203

Query: 542 EIMDLSVIAKENKKRLFMYIEKLPLIIPGDI--SHPTDSHLK 661
           + +++  I +ENKKRLF+YIEKLPL++P  +  S P D H+K
Sbjct: 204 DTVNMYTIERENKKRLFVYIEKLPLVVPDQVFASSPYDCHVK 245


>ref|XP_002525634.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223535070|gb|EEF36752.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 243

 Score =  311 bits (797), Expect = 1e-82
 Identities = 142/220 (64%), Positives = 177/220 (80%)
 Frame = +2

Query: 2   ALSYPRDHDGASLQMRLSFSPAVDLFSFLFPWTDCKIAGALGLLRIFIYMTYADGKTTMC 181
           AL YPR+ DGA LQMRLS+S A   F FL  WTDC +AGALGLLR+ IY+TYADGKTTM 
Sbjct: 24  ALDYPREKDGARLQMRLSYSQAAQFFLFLVQWTDCHLAGALGLLRVLIYVTYADGKTTMS 83

Query: 182 VQERKASIKQFYDVIFPSILQLQSGITDLEERKQKDICSKRYSRKDGSDKGKLSDADAER 361
           V ERKAS+++FY VIFPS+LQLQ GITDLE++KQK++C+ RY R+D  +K +LS+ D ER
Sbjct: 84  VYERKASLREFYGVIFPSLLQLQRGITDLEDKKQKEVCNIRYRRRDELEKERLSEIDIER 143

Query: 362 EIECGICMETNTRVVLPNCSHSLCFKCYRDWHGRSQSCPFCRDSLKEVNISDLWVCIEAG 541
           E ECGIC+E +++V+LPNC+HSLC KCY+DWH RSQSCPFCRDSLK VN  DLW+  +  
Sbjct: 144 EEECGICLEMHSKVILPNCNHSLCLKCYQDWHQRSQSCPFCRDSLKRVNSGDLWIYTDKS 203

Query: 542 EIMDLSVIAKENKKRLFMYIEKLPLIIPGDISHPTDSHLK 661
           + +DL +I +EN KRLFMYIEKLPLI+P  +  P DSH++
Sbjct: 204 DTVDLPLILRENCKRLFMYIEKLPLIVPDHVIIPYDSHVR 243


>ref|NP_190300.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
           gi|6522597|emb|CAB61962.1| RNA binding-like protein
           [Arabidopsis thaliana] gi|20466304|gb|AAM20469.1|
           RNA-binding protein-like protein [Arabidopsis thaliana]
           gi|25083984|gb|AAN72147.1| RNA-binding protein-like
           protein [Arabidopsis thaliana]
           gi|70905087|gb|AAZ14069.1| At3g47160 [Arabidopsis
           thaliana] gi|332644728|gb|AEE78249.1| RING/U-box
           domain-containing protein [Arabidopsis thaliana]
          Length = 245

 Score =  311 bits (796), Expect = 1e-82
 Identities = 144/222 (64%), Positives = 173/222 (77%), Gaps = 2/222 (0%)
 Frame = +2

Query: 2   ALSYPRDHDGASLQMRLSFSPAVDLFSFLFPWTDCKIAGALGLLRIFIYMTYADGKTTMC 181
           AL YPR+ DGA +QMRLS++PA     FL  WTDC +AG LGLLR+ IYMTYADGKTTM 
Sbjct: 24  ALDYPREKDGARVQMRLSYTPAAQFLLFLVQWTDCHLAGTLGLLRVLIYMTYADGKTTMS 83

Query: 182 VQERKASIKQFYDVIFPSILQLQSGITDLEERKQKDICSKRYSRKDGSDKGKLSDADAER 361
           V ERK SIK FY VIFPS+LQL+ GITDL++RKQK++C  RY  KD ++K KLS+ D ER
Sbjct: 84  VYERKTSIKDFYAVIFPSLLQLERGITDLDDRKQKEVCKIRYRNKDETEKVKLSEIDIER 143

Query: 362 EIECGICMETNTRVVLPNCSHSLCFKCYRDWHGRSQSCPFCRDSLKEVNISDLWVCIEAG 541
           E ECGICME N  VVLPNC+HSLC KCYRDWHGRS+SCPFCRDSLK VN  DLW+ +E  
Sbjct: 144 EEECGICMEMNNMVVLPNCTHSLCIKCYRDWHGRSESCPFCRDSLKRVNSGDLWMLMEKS 203

Query: 542 EIMDLSVIAKENKKRLFMYIEKLPLIIPGDI--SHPTDSHLK 661
           + +++  I +ENKKRLF+YIEKLPL++P  +  S P D H+K
Sbjct: 204 DTVNMYTIERENKKRLFVYIEKLPLVVPDQVFASSPYDCHVK 245


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