BLASTX nr result

ID: Atractylodes22_contig00010602 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00010602
         (1581 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus ...   262   2e-67
ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...   258   3e-66
ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|2...   239   2e-60
ref|XP_003594391.1| F-box protein [Medicago truncatula] gi|35548...   232   2e-58
ref|XP_003546182.1| PREDICTED: F-box protein CPR30-like [Glycine...   228   3e-57

>ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223527546|gb|EEF29668.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 389

 Score =  262 bits (669), Expect = 2e-67
 Identities = 146/362 (40%), Positives = 216/362 (59%), Gaps = 3/362 (0%)
 Frame = +3

Query: 90   MSDVPMPPDVLAQILSWLPVTPLLRFRSVSKSFRALIDSDYVIKLHLNHSVQTNTNINLI 269
            MS++P+  +++A+IL  L    LL  R VSK +R LIDS   I LHLNHS+++  N+++I
Sbjct: 1    MSNLPL--EMIAEILCRLTAKKLLCCRCVSKRWRTLIDSPTFIYLHLNHSIESPCNLSII 58

Query: 270  FGGDRTLCYLNLDSSSKAVNKIDNPLYFAIFETVILGSCNGVVCLCTTEPDNEIAFWNPL 449
                  L  L+ D     +  +D+PL        ILGSCNG++C+C    D  IA WNP 
Sbjct: 59   LKSSE-LYSLSFDLLDN-IQPLDHPLMCYNHGVKILGSCNGLLCICNIVDD--IALWNPS 114

Query: 450  VRKFKKVRLAPAKCSEGFGRGIC---IKGFGYDHVNDDHKVVRLVQHCSMYNELVYSKIE 620
            +R  + V   P +    FG   C   + GFGYD  NDD+K+VR+ Q   +  +   S+++
Sbjct: 115  IRAHRVVPYLPVELKRYFGMCSCRVSVFGFGYDLSNDDYKLVRIAQFGGVDRKSFESEVK 174

Query: 621  VFSSKTDAWREIGDFPYYLCFRKNFNVFAKGALHWLVKEKPESKVDFLIAALDLATEELR 800
            VFS + ++WR I D PY + +     ++A GALHWLV + P+S V   I ALDL  E+  
Sbjct: 175  VFSLRKNSWRRIADMPYCVLYPGENGIYANGALHWLVSQDPDSTVADTIVALDLGVEDYH 234

Query: 801  LVPQPEFANEMVHVNLAVLGGCLSMVCNYPRKFVDIWVMKSYGVKDSWTKLISTTDVKLI 980
            +VP+PEF +   ++ + VL GCLS++     + VD+WVM+ Y VK+SW+KL S   +++I
Sbjct: 235  VVPKPEFVDMNCNMGVGVLQGCLSLLAYARSERVDVWVMEEYMVKESWSKLFSVARLEVI 294

Query: 981  KELDFLRPIVYSKSGKEVLLEKNFERLYWYNLESKMVKRLNVAGMPRLFVTEIFTGSLVQ 1160
              L  L+P+ YSKSG EVL+E +   L+WY+L+ K V  + + G+P  F  EI  GSLV 
Sbjct: 295  GILRSLKPLAYSKSGNEVLIEHDNVNLFWYDLKRKEVVNVWIQGVPITFEAEICVGSLVP 354

Query: 1161 VN 1166
            +N
Sbjct: 355  LN 356


>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
            gi|222854763|gb|EEE92310.1| f-box family protein [Populus
            trichocarpa]
          Length = 396

 Score =  258 bits (659), Expect = 3e-66
 Identities = 143/362 (39%), Positives = 212/362 (58%), Gaps = 8/362 (2%)
 Frame = +3

Query: 105  MPPDVLAQILSWLPVTPLLRFRSVSKSFRALIDSDYVIKLHLNHSVQTNTNINLIFGGDR 284
            +P +++A+IL  LP   LL  RSVSK + ALID    +KLHL HS+ T++N+ +I     
Sbjct: 4    LPLEMIAEILCRLPAKELLCCRSVSKPWCALIDGPNFVKLHLKHSMDTSSNLYIILRTTS 63

Query: 285  TLCYLNLDSS-----SKAVNKIDNPLYFAIFETVILGSCNGVVCLCTTEPDNEIAFWNPL 449
             + Y++ + +        + ++++PL        +LGS NG++C+     D  IA WNP 
Sbjct: 64   HVHYMDFEQNLVLNDCVTLKELNHPLMCYNHGIKVLGSVNGLLCISNVVDD--IAVWNPS 121

Query: 450  VRKFKKVRLAPAKCSEGFGRGIC---IKGFGYDHVNDDHKVVRLVQHCSMYNELVYSKIE 620
             RK + V   P +    FG   C   + GFGYD V DD+K+VR+ Q          S+++
Sbjct: 122  TRKHRVVPFLPIELKRYFGTKSCSVYVFGFGYDSVRDDYKLVRIAQFGGGGKRSFESEVK 181

Query: 621  VFSSKTDAWREIGDFPYYLCFRKNFNVFAKGALHWLVKEKPESKVDFLIAALDLATEELR 800
            V+S +  +WR IGD PY + +     VFA GALHW+V E PES V  ++ ALDL  E+ R
Sbjct: 182  VYSLRKQSWRRIGDMPYCVHYPGANGVFANGALHWVVGENPESNVANIVVALDLGVEDYR 241

Query: 801  LVPQPEFANEMVHVNLAVLGGCLSMVCNYPRKFVDIWVMKSYGVKDSWTKLISTTDVKLI 980
             V QPE+ ++  +++L VL GCL  + N+  + VD+W+MK YGVK+SWTKL S    ++I
Sbjct: 242  EVLQPEYKDKNFYIDLGVLRGCLCFLANFLGERVDVWMMKEYGVKESWTKLFSVAQYEVI 301

Query: 981  KELDFLRPIVYSKSGKEVLLEKNFERLYWYNLESKMVKRLNVAGMPRLFVTEIFTGSLVQ 1160
              L  L+P+ YSKSG EVL+E +   L WY+L+ K VK   + G+P  F  + F  SL+ 
Sbjct: 302  GFLRSLKPLAYSKSGDEVLIEHDNLDLCWYDLKRKQVKN-RIPGIPYSFEADTFVESLIS 360

Query: 1161 VN 1166
            V+
Sbjct: 361  VS 362


>ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|222844963|gb|EEE82510.1|
            predicted protein [Populus trichocarpa]
          Length = 408

 Score =  239 bits (609), Expect = 2e-60
 Identities = 143/378 (37%), Positives = 211/378 (55%), Gaps = 24/378 (6%)
 Frame = +3

Query: 111  PDVLAQILSWLPVTPLLRFRSVSKSFRALIDSDYVIKLHLNHSVQTNTNINLIFGGDRTL 290
            P++ A ILS LPV  L RFR VSKS+   IDS Y I  HL  S Q +T++NLI      L
Sbjct: 5    PEITADILSRLPVKSLKRFRCVSKSWCKEIDSPYFINTHLKRSSQAHTHLNLILRDATNL 64

Query: 291  CYLNLDSSS-KAVNKIDNPLYFAIFETVILGSCNGVVCLCTTEPDNEIAFWNPLVRKFKK 467
            C ++LDS    ++   +NPL      T ++GSCNG++ L  +  D  IA +NP  R+ K 
Sbjct: 65   CTVDLDSPDFTSIELKNNPLKSDDCATEVMGSCNGLLALLNS--DFSIALYNPSTREKKM 122

Query: 468  VRLAP---------AKCSEGFGRGICIKGFGYDHVNDDHKVVRLVQ-HCSMYNELVYSKI 617
            + ++P         +K S  F       GFG+D +N+D+KVVR +  +    +   + ++
Sbjct: 123  IPVSPLELPNDLDDSKVSSLFN----FYGFGHDPINEDYKVVRFIHFYGDSPDGFFHCEV 178

Query: 618  EVFSSKTDAWREIGDFPYYLCF----------RKNFNVFAKGALHW--LVKEKPESKVDF 761
            +V+S K+++W+ I D+PY L F          R+ + VFA  A+HW   V  K +     
Sbjct: 179  KVYSLKSNSWKRIDDYPYDLRFILPPDYHPRCRRGYGVFANSAVHWKATVVGKGKENGSD 238

Query: 762  LIAALDLATEELRLVPQPEFANEMVHVNLAVLGGCLSMVCNYPRKFVDIWVMKSYGVKDS 941
            LI A DL  EE +++PQP++++    +N+ VLGGCL + CN   K V+IWVMK YGVK+S
Sbjct: 239  LIVAFDLGAEEFKIIPQPDYSSNEHEMNVGVLGGCLCVFCNKNCKQVEIWVMKEYGVKES 298

Query: 942  WTKLISTTDVKLIKELDF-LRPIVYSKSGKEVLLEKNFERLYWYNLESKMVKRLNVAGMP 1118
            WT L +      +K      RP+ YSK G ++LLE +     WY+L  +  K + + G P
Sbjct: 299  WTHLCTVIAQLQVKAFWLHARPLAYSKGGDKILLELDNRFFVWYDLRRRKSKIIRIRGAP 358

Query: 1119 RLFVTEIFTGSLVQVNVG 1172
             +F+ EI  GSLV +N G
Sbjct: 359  PIFIAEICVGSLVTLNGG 376


>ref|XP_003594391.1| F-box protein [Medicago truncatula] gi|355483439|gb|AES64642.1| F-box
            protein [Medicago truncatula]
          Length = 388

 Score =  232 bits (592), Expect = 2e-58
 Identities = 141/369 (38%), Positives = 212/369 (57%), Gaps = 18/369 (4%)
 Frame = +3

Query: 105  MPPDVLAQILSWLPVTPLLRFRSVSKSFRALIDSDYVIKLHLNHSVQTNTNINLIFGGDR 284
            +PP++L++I S LPV  LLRFRS SKS ++LIDS   I LHL +S+    N NLI     
Sbjct: 4    LPPEILSEIFSRLPVKSLLRFRSTSKSLKSLIDSHKFINLHLQNSL----NFNLILRRKT 59

Query: 285  TLCYLNLDSSSKAVNKIDNPLYFAIFETVILGSCNGVVCLCTTE-------PDNEIAFWN 443
             L +L+  + + AV  +++P         +LGSCNG++ +   E         NEIAF N
Sbjct: 60   DLYHLHFPNLTTAV-PLNHPFIHHSNNIALLGSCNGLLAISNGEIAFTNPYSANEIAFCN 118

Query: 444  PLVRKFKKVRLAPAKC---SEGFGRGICIKGFGYDHVNDDHKVVRL-----VQHCSMYNE 599
            P +RK + +   P      S+     +C+ GFG+D ++ D+K++R+     +QH +  N 
Sbjct: 119  PTIRKHRIIPYLPLPIPSRSQSDNIALCVHGFGFDSLSADYKLLRISWFVDLQHHTFDN- 177

Query: 600  LVYSKIEVFSSKTDAWREIGDFPYYLCFRKNFNVFAKGALHWLVKEKPESKVDFLIAALD 779
               S + +FSSKT++W+ + D PY L +     VF + +LHW++  K +     LIAA +
Sbjct: 178  ---SHLTLFSSKTNSWKTLPDMPYILYYTLTMGVFVENSLHWIMTPKLDGLQPCLIAAFN 234

Query: 780  LATEELRLVPQPE--FANEMVHVNLAVLGGCLSMVCNYPRKFVDIWVMKSYGVKDSWTKL 953
            L+ E    VP P+   +NE   +++AVLGGCL +  NY    +D+WVMK YG +DSW K 
Sbjct: 235  LSLEIFNEVPLPDEIISNESFKISIAVLGGCLCLPVNYQTTKIDVWVMKEYGCRDSWCKH 294

Query: 954  ISTTDVKLIKE-LDFLRPIVYSKSGKEVLLEKNFERLYWYNLESKMVKRLNVAGMPRLFV 1130
             +     L+K  LDFLRP+ Y   G +VLLE + ++L+WY+L+S+ +    V G+P L  
Sbjct: 295  FT-----LVKSCLDFLRPLGYCSDGSKVLLEIDCKKLFWYDLKSEQIS--YVEGIPNLDD 347

Query: 1131 TEIFTGSLV 1157
            T I  GSLV
Sbjct: 348  TMICVGSLV 356


>ref|XP_003546182.1| PREDICTED: F-box protein CPR30-like [Glycine max]
          Length = 394

 Score =  228 bits (581), Expect = 3e-57
 Identities = 130/363 (35%), Positives = 205/363 (56%), Gaps = 7/363 (1%)
 Frame = +3

Query: 90   MSDVPMPPDVLAQILSWLPVTPLLRFRSVSKSFRALIDSDYVIKLHLNHSVQTNTNINLI 269
            MSD  +P +VL +ILS LPV  LLRFRS SKS+++LIDS ++  LHL  S+   +N +LI
Sbjct: 1    MSD-HLPREVLTEILSRLPVRSLLRFRSTSKSWKSLIDSQHLNWLHLTRSLTLTSNTSLI 59

Query: 270  FGGDRTLCYLNLDSSSKAVNKIDNPLYFAIFETVILGSCNGVVCLCTTEPDNEIAFWNPL 449
               D  L   N  +    V+ +++PL        +LGSCNG++C+     D  IAFWNP 
Sbjct: 60   LRVDSDLYQTNFPTLDPPVS-LNHPLMCYSNSITLLGSCNGLLCISNVADD--IAFWNPS 116

Query: 450  VRKFKKVRLAPAKCSEG-----FGRGICIKGFGYDHVNDDHKVVRLVQHCSMYNELVYSK 614
            +R+ + +   P           F   +C  GFG+DH   D+K+VR+     +++    S+
Sbjct: 117  LRQHRILPYLPVPRRRHPDTTLFAARVC--GFGFDHKTRDYKLVRISYFVDLHDRSFDSQ 174

Query: 615  IEVFSSKTDAWREIGDFPYYLCFRKNFNVFAKGALHWLVKEKPESKVDFLIAALDLATEE 794
            +++++ + +AW+ +   PY LC  +   VF   +LHW+V  K E     LI A DL  + 
Sbjct: 175  VKLYTLRANAWKTLPSLPYALCCARTMGVFVGNSLHWVVTRKLEPDQPDLIIAFDLTHDI 234

Query: 795  LRLVPQPEFA--NEMVHVNLAVLGGCLSMVCNYPRKFVDIWVMKSYGVKDSWTKLISTTD 968
             R +P P+    +    ++LA+LGG L M  N+ +  +D+WVM+ Y  +DSW K+ +  +
Sbjct: 235  FRELPLPDTGGVDGGFEIDLALLGGSLCMTVNFHKTRIDVWVMREYNRRDSWCKVFTLEE 294

Query: 969  VKLIKELDFLRPIVYSKSGKEVLLEKNFERLYWYNLESKMVKRLNVAGMPRLFVTEIFTG 1148
             + ++ L  +RP+ YS  G +VLLE + +RL+WY+LE K V  + + G+P L    I  G
Sbjct: 295  SREMRSLKCVRPLGYSSDGNKVLLEHDRKRLFWYDLEKKEVALVKIQGLPNLNEAMICLG 354

Query: 1149 SLV 1157
            +LV
Sbjct: 355  TLV 357


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