BLASTX nr result

ID: Atractylodes22_contig00010598 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00010598
         (1065 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320006.1| predicted protein [Populus trichocarpa] gi|2...    70   7e-10
ref|XP_002310889.1| predicted protein [Populus trichocarpa] gi|2...    70   1e-09
ref|XP_002525296.1| conserved hypothetical protein [Ricinus comm...    64   6e-08
ref|NP_001236250.1| uncharacterized protein LOC100500571 [Glycin...    57   6e-06

>ref|XP_002320006.1| predicted protein [Populus trichocarpa] gi|222860779|gb|EEE98321.1|
           predicted protein [Populus trichocarpa]
          Length = 126

 Score = 70.5 bits (171), Expect = 7e-10
 Identities = 40/82 (48%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
 Frame = -3

Query: 931 SYLNSLHSVRKLTNKPITKQFIAPLPPTPAKVYNIESSNFKEAVRVLTSSP--EFQSPPV 758
           SY +SLHS+R+   KP  K  IAPLPPTP +VY ++  NF++ V+ LT +P  E +  P 
Sbjct: 4   SYHSSLHSIRRTQMKPWKKP-IAPLPPTPPRVYKVDPINFRDLVQKLTGAPKKEPEPEPQ 62

Query: 757 RRLKDIAPPPLILSTIPKPSLF 692
            RL+ +APPPL L T   P+LF
Sbjct: 63  SRLQSVAPPPLDLFT---PTLF 81


>ref|XP_002310889.1| predicted protein [Populus trichocarpa] gi|222853792|gb|EEE91339.1|
           predicted protein [Populus trichocarpa]
          Length = 193

 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 47/118 (39%), Positives = 68/118 (57%), Gaps = 4/118 (3%)
 Frame = -3

Query: 931 SYLNSLHSVRKLTNKPITKQFIAPLPPTPAKVYNIESSNFKEAVRVLTSSPEFQSPP--- 761
           SY  SLHS+RK   KP  K  IAPLPPTP +VY ++  NF++ V+ LT +PE +  P   
Sbjct: 33  SYHLSLHSIRKPQMKPCKKP-IAPLPPTPPRVYKVDPINFRDLVQKLTGAPEPEPVPEPQ 91

Query: 760 -VRRLKDIAPPPLILSTIPKPSLFPKPTAPEGGGVALSPLSAFTLSPDFCNFLNETLD 590
              RL+ +APPPL L+   KP+L+ +  +     +  SP     LS  +   ++E+LD
Sbjct: 92  HQPRLQSVAPPPLDLA---KPTLYGRDFSAVPLQLLPSPAKT-PLSALYQELMSESLD 145


>ref|XP_002525296.1| conserved hypothetical protein [Ricinus communis]
           gi|223535454|gb|EEF37124.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 199

 Score = 63.9 bits (154), Expect = 6e-08
 Identities = 38/89 (42%), Positives = 55/89 (61%), Gaps = 4/89 (4%)
 Frame = -3

Query: 931 SYLNSLHSVRKLTNKPITKQFIAPLPPTPAKVYNIESSNFKEAVRVLTSSPEFQ----SP 764
           S+ +SLHSVRK       K+ IAPLPPTP +VY ++  NF++ V+ LT +P+      + 
Sbjct: 33  SFHSSLHSVRKPYQVKPWKKPIAPLPPTPPRVYKVDPINFRDLVQKLTGAPDPSESQGNN 92

Query: 763 PVRRLKDIAPPPLILSTIPKPSLFPKPTA 677
             +RL+ +APPPL L    KP+LF +  A
Sbjct: 93  QQQRLQRVAPPPLDLD--KKPALFSREFA 119


>ref|NP_001236250.1| uncharacterized protein LOC100500571 [Glycine max]
           gi|255630653|gb|ACU15686.1| unknown [Glycine max]
          Length = 155

 Score = 57.4 bits (137), Expect = 6e-06
 Identities = 35/100 (35%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
 Frame = -3

Query: 943 STRPSYLNSLHSVRKLTNKPITKQFIAPLPPTPAKVYNIESSNFKEAVRVLTSSPEFQSP 764
           ST+P  ++ LH+VRK+  KP  K  +AP  PTP +VY +++ NF++ V+ LT +PEF+ P
Sbjct: 12  STKP--ISLLHTVRKVQAKPWKKAAVAPPAPTPIRVYKVDAINFRDLVQQLTGAPEFK-P 68

Query: 763 PVRRLKDIAP--PPLILSTIPKPSLFPKPTAPEGGGVALS 650
             +    + P   P+  + +  P    KPT      +A S
Sbjct: 69  ADQEQHQLFPSVAPIAATFVDTPQ---KPTLSSKDNIAAS 105


Top