BLASTX nr result
ID: Atractylodes22_contig00010546
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atractylodes22_contig00010546 (555 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana] 63 1e-14 gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana] 62 3e-13 dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 62 3e-13 gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc... 55 6e-13 emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga... 59 2e-12 >gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana] Length = 653 Score = 63.2 bits (152), Expect(2) = 1e-14 Identities = 38/92 (41%), Positives = 52/92 (56%), Gaps = 1/92 (1%) Frame = -1 Query: 297 LISLVMEILNLVLVQEIASDRSFTYHKGCE*TKLTHLGFADDLMFCM-GNVPSLMVLKRV 121 L + M++L+ +L Q AS + F YH C+ LTHL FADDLM G V S+ + V Sbjct: 193 LFVMSMDVLSKLLDQA-ASAKKFGYHSRCKELSLTHLSFADDLMVLSDGKVRSIDGIVEV 251 Query: 120 IDKFPRLSGLKVNIMKSTAYFCNVPRETKQEI 25 D F + SGLK+++ KST Y V + EI Sbjct: 252 FDIFAKFSGLKISMEKSTIYLAGVTEDVYHEI 283 Score = 41.2 bits (95), Expect(2) = 1e-14 Identities = 21/41 (51%), Positives = 24/41 (58%) Frame = -2 Query: 416 VGWIMECVRTVSFSINVNGDSHGFFVXXXXXXXGDPLSPYL 294 V WIM C+ T SFS+ VNG+ GFF G LSPYL Sbjct: 153 VHWIMLCISTASFSVQVNGELVGFFQSKRGLRQGCSLSPYL 193 >gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana] Length = 872 Score = 61.6 bits (148), Expect(2) = 3e-13 Identities = 37/94 (39%), Positives = 54/94 (57%), Gaps = 1/94 (1%) Frame = -1 Query: 297 LISLVMEILNLVLVQEIASDRSFTYHKGCE*TKLTHLGFADDLMFCM-GNVPSLMVLKRV 121 L + M++L+ +L + A R F +H C+ LTHL FADDLM G S+ + V Sbjct: 313 LFVICMDVLSKML-DKAAGVRKFGFHPKCQRLGLTHLSFADDLMVLSDGKTRSIEGILEV 371 Query: 120 IDKFPRLSGLKVNIMKSTAYFCNVPRETKQEISA 19 D+F + SGL++++ KST Y V KQEI+A Sbjct: 372 FDEFCKRSGLRISLEKSTLYMAGVSPIIKQEIAA 405 Score = 38.5 bits (88), Expect(2) = 3e-13 Identities = 19/41 (46%), Positives = 23/41 (56%) Frame = -2 Query: 416 VGWIMECVRTVSFSINVNGDSHGFFVXXXXXXXGDPLSPYL 294 + WI C+ T SFS+ VNGD G+F G LSPYL Sbjct: 273 IHWINLCITTASFSVQVNGDLVGYFQSKRGLRQGCSLSPYL 313 >dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis thaliana] Length = 1223 Score = 62.4 bits (150), Expect(2) = 3e-13 Identities = 35/100 (35%), Positives = 57/100 (57%), Gaps = 1/100 (1%) Frame = -1 Query: 297 LISLVMEILNLVLVQEIASDRSFTYHKGCE*TKLTHLGFADDLMFCM-GNVPSLMVLKRV 121 L + M++L+ +L + A+ R F YH C+ LTHL FADDLM G + S+ + +V Sbjct: 666 LFVICMDVLSKML-DKAAAARHFGYHPKCKTMGLTHLSFADDLMVLSDGKIRSIERIIKV 724 Query: 120 IDKFPRLSGLKVNIMKSTAYFCNVPRETKQEISATVKISS 1 D+F + SGL++++ KST Y + + E++ SS Sbjct: 725 FDEFAKWSGLRISLEKSTVYLAGLSATARNEVADRFPFSS 764 Score = 37.4 bits (85), Expect(2) = 3e-13 Identities = 18/41 (43%), Positives = 23/41 (56%) Frame = -2 Query: 416 VGWIMECVRTVSFSINVNGDSHGFFVXXXXXXXGDPLSPYL 294 + WI C+ T SFS+ VNG+ G+F G LSPYL Sbjct: 626 IHWINICITTASFSVQVNGELAGYFQSSRGLRQGCALSPYL 666 >gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus] Length = 1214 Score = 55.1 bits (131), Expect(2) = 6e-13 Identities = 38/99 (38%), Positives = 53/99 (53%), Gaps = 2/99 (2%) Frame = -1 Query: 309 PLS-LLISLVMEILNLVLVQEIASDRSFTYHKGCE*TKLTHLGFADDLM-FCMGNVPSLM 136 PLS L + MEIL+ +L + SD S YH +++ L FADDLM F G SL Sbjct: 654 PLSPSLFVIAMEILSRLLENKF-SDGSIGYHPKASEVRISSLAFADDLMIFYDGKASSLR 712 Query: 135 VLKRVIDKFPRLSGLKVNIMKSTAYFCNVPRETKQEISA 19 +K V++ F LSGL++N KS Y + K++ A Sbjct: 713 GIKSVLESFKNLSGLEMNTEKSAVYTAGLEDTDKEDTLA 751 Score = 43.9 bits (102), Expect(2) = 6e-13 Identities = 21/43 (48%), Positives = 26/43 (60%) Frame = -2 Query: 422 RMVGWIMECVRTVSFSINVNGDSHGFFVXXXXXXXGDPLSPYL 294 R V WI +C+ + SFSINV+G G+F GDPLSP L Sbjct: 617 RFVNWIKQCITSTSFSINVSGSLCGYFKGSKGLRQGDPLSPSL 659 >emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris] Length = 1114 Score = 59.3 bits (142), Expect(2) = 2e-12 Identities = 37/103 (35%), Positives = 56/103 (54%), Gaps = 2/103 (1%) Frame = -1 Query: 309 PLS-LLISLVMEILNLVLVQEIASDRSFTYHKGCE*TKLTHLGFADD-LMFCMGNVPSLM 136 PLS L +L ME L+ + + D F +H CE KLTHL FADD LMF + S+ Sbjct: 649 PLSPFLFALSMEYLSRCM-GNMCKDPEFNFHPKCERIKLTHLMFADDLLMFARADASSIS 707 Query: 135 VLKRVIDKFPRLSGLKVNIMKSTAYFCNVPRETKQEISATVKI 7 + + F + SGL+ +I KS YF V E ++++ +++ Sbjct: 708 KIMAAFNSFSKASGLQASIEKSCIYFGGVCHEEAEQLADRIQM 750 Score = 37.7 bits (86), Expect(2) = 2e-12 Identities = 20/41 (48%), Positives = 25/41 (60%) Frame = -2 Query: 416 VGWIMECVRTVSFSINVNGDSHGFFVXXXXXXXGDPLSPYL 294 + WIM CV+TVS+SI +NG F GDPLSP+L Sbjct: 614 IRWIMACVKTVSYSILLNGIPSIPFDAQKGLRQGDPLSPFL 654