BLASTX nr result

ID: Atractylodes22_contig00010456 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00010456
         (816 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_566107.1| small nuclear ribonucleoprotein D2 [Arabidopsis...   192   6e-47
ref|XP_002878480.1| predicted protein [Arabidopsis lyrata subsp....   192   7e-47
ref|XP_004146504.1| PREDICTED: probable small nuclear ribonucleo...   191   2e-46
ref|NP_001241022.1| uncharacterized protein LOC100793233 [Glycin...   190   4e-46
ref|XP_003630987.1| Small nuclear ribonucleoprotein-like protein...   189   5e-46

>ref|NP_566107.1| small nuclear ribonucleoprotein D2 [Arabidopsis thaliana]
           gi|145331435|ref|NP_001078076.1| small nuclear
           ribonucleoprotein D2 [Arabidopsis thaliana]
           gi|145339793|ref|NP_567134.3| small nuclear
           ribonucleoprotein D2 [Arabidopsis thaliana]
           gi|20196966|gb|AAM14847.1| putative small nuclear
           ribonucleoprotein D2 [Arabidopsis thaliana]
           gi|20197310|gb|AAC63620.2| putative small nuclear
           ribonucleoprotein D2 [Arabidopsis thaliana]
           gi|330255773|gb|AEC10867.1| small nuclear
           ribonucleoprotein D2 [Arabidopsis thaliana]
           gi|330255776|gb|AEC10870.1| small nuclear
           ribonucleoprotein D2 [Arabidopsis thaliana]
           gi|332646879|gb|AEE80400.1| small nuclear
           ribonucleoprotein D2 [Arabidopsis thaliana]
          Length = 109

 Score =  192 bits (489), Expect = 6e-47
 Identities = 93/100 (93%), Positives = 96/100 (96%)
 Frame = +1

Query: 154 MSRPMEEDGQQTKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNM 333
           MS+PMEED  Q K EEEEFNTGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNM
Sbjct: 1   MSKPMEEDTNQGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNM 60

Query: 334 VLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDS 453
           VLENVREMWTEVPKTGKGKKKALPVN+DRFISKMFLRGDS
Sbjct: 61  VLENVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDS 100


>ref|XP_002878480.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297324318|gb|EFH54739.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 109

 Score =  192 bits (488), Expect = 7e-47
 Identities = 93/100 (93%), Positives = 96/100 (96%)
 Frame = +1

Query: 154 MSRPMEEDGQQTKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNM 333
           MS+PMEED  Q K EEEEFNTGPLSVLMMSVKNNTQVLINCRNN+KLLGRVRAFDRHCNM
Sbjct: 1   MSKPMEEDTTQGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNM 60

Query: 334 VLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDS 453
           VLENVREMWTEVPKTGKGKKKALPVN+DRFISKMFLRGDS
Sbjct: 61  VLENVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDS 100


>ref|XP_004146504.1| PREDICTED: probable small nuclear ribonucleoprotein Sm D2-like
           [Cucumis sativus] gi|449499984|ref|XP_004160970.1|
           PREDICTED: probable small nuclear ribonucleoprotein Sm
           D2-like [Cucumis sativus]
          Length = 107

 Score =  191 bits (484), Expect = 2e-46
 Identities = 95/100 (95%), Positives = 96/100 (96%)
 Frame = +1

Query: 154 MSRPMEEDGQQTKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNM 333
           MSRPMEED   +KNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNM
Sbjct: 1   MSRPMEED--TSKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNM 58

Query: 334 VLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDS 453
           VLENVREMWTEVPKTGKGKKKA PVNKDRFISKMFLRGDS
Sbjct: 59  VLENVREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDS 98


>ref|NP_001241022.1| uncharacterized protein LOC100793233 [Glycine max]
           gi|255633912|gb|ACU17317.1| unknown [Glycine max]
          Length = 108

 Score =  190 bits (482), Expect = 4e-46
 Identities = 95/100 (95%), Positives = 95/100 (95%)
 Frame = +1

Query: 154 MSRPMEEDGQQTKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNM 333
           MSRPMEED    KNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNM
Sbjct: 1   MSRPMEEDAAG-KNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNM 59

Query: 334 VLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDS 453
           VLENVREMWTEVPKTGKGKKKA PVNKDRFISKMFLRGDS
Sbjct: 60  VLENVREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDS 99


>ref|XP_003630987.1| Small nuclear ribonucleoprotein-like protein [Medicago truncatula]
           gi|355525009|gb|AET05463.1| Small nuclear
           ribonucleoprotein-like protein [Medicago truncatula]
           gi|388506390|gb|AFK41261.1| unknown [Medicago
           truncatula]
          Length = 108

 Score =  189 bits (481), Expect = 5e-46
 Identities = 95/100 (95%), Positives = 95/100 (95%)
 Frame = +1

Query: 154 MSRPMEEDGQQTKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNM 333
           MSRPMEED    KNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNM
Sbjct: 1   MSRPMEEDAVG-KNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNM 59

Query: 334 VLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDS 453
           VLENVREMWTEVPKTGKGKKKA PVNKDRFISKMFLRGDS
Sbjct: 60  VLENVREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDS 99


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