BLASTX nr result

ID: Atractylodes22_contig00010366 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00010366
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270546.2| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   127   7e-28
ref|XP_002514778.1| pentatricopeptide repeat-containing protein,...   124   1e-26
ref|XP_002300357.1| predicted protein [Populus trichocarpa] gi|2...   117   7e-25
ref|XP_004138984.1| PREDICTED: pentatricopeptide repeat-containi...   102   3e-20
ref|XP_003542095.1| PREDICTED: pentatricopeptide repeat-containi...    99   3e-19

>ref|XP_002270546.2| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g02650, mitochondrial-like [Vitis vinifera]
          Length = 509

 Score =  127 bits (320), Expect = 7e-28
 Identities = 62/113 (54%), Positives = 84/113 (74%)
 Frame = +2

Query: 2   GYEVYNKFGDFLCATNADSYYFTIEALCRRSIFDRVGLVCERMLSEEKIPETGKVGNIIC 181
           G EV+N FG++ C  NADSYYFTIEALCRRSIFD    VCE+ML+   +P++ KV NII 
Sbjct: 242 GLEVFNAFGEYGCEPNADSYYFTIEALCRRSIFDWALSVCEKMLNASSLPDSEKVWNIIS 301

Query: 182 YLCKAGFVKEAHSVYLLAKEKQRYPAQSSVNFLISSLCDRKKNDPGSVHLALK 340
           + CK   VK+A+ VYLLAKEK +YP +++VNFLI+SLC     + G++ +A++
Sbjct: 302 WFCKGRKVKDAYLVYLLAKEKNKYPPKTTVNFLIASLC----REDGTISMAVE 350


>ref|XP_002514778.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545829|gb|EEF47332.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 584

 Score =  124 bits (310), Expect = 1e-26
 Identities = 60/112 (53%), Positives = 80/112 (71%)
 Frame = +2

Query: 5   YEVYNKFGDFLCATNADSYYFTIEALCRRSIFDRVGLVCERMLSEEKIPETGKVGNIICY 184
           +EV+NKFGDF C  ++++Y++TIEALCRRSIFD    V E+ML  E +P+T K+G IIC+
Sbjct: 262 FEVFNKFGDFGCVPDSETYHYTIEALCRRSIFDWASSVREKMLRAEALPDTEKIGKIICW 321

Query: 185 LCKAGFVKEAHSVYLLAKEKQRYPAQSSVNFLISSLCDRKKNDPGSVHLALK 340
            CK     +A+ VYLLAKEK +YP Q SVNFLI  LC + +    +V LAL+
Sbjct: 322 FCKGDKANDAYLVYLLAKEKNKYPPQPSVNFLIGLLCQKNE----TVKLALE 369


>ref|XP_002300357.1| predicted protein [Populus trichocarpa] gi|222847615|gb|EEE85162.1|
           predicted protein [Populus trichocarpa]
          Length = 476

 Score =  117 bits (294), Expect = 7e-25
 Identities = 55/111 (49%), Positives = 79/111 (71%)
 Frame = +2

Query: 8   EVYNKFGDFLCATNADSYYFTIEALCRRSIFDRVGLVCERMLSEEKIPETGKVGNIICYL 187
           EV++K  DF C  ++++YY+TIEALCRRS +D   +VCE+ML +  +P++ K+G IIC+ 
Sbjct: 155 EVFDKSKDFGCVPDSETYYYTIEALCRRSFYDWAWIVCEKMLDQGPLPDSEKIGKIICWF 214

Query: 188 CKAGFVKEAHSVYLLAKEKQRYPAQSSVNFLISSLCDRKKNDPGSVHLALK 340
           CK    K+AH VYLLAKEK + P + ++ FLI SLC     D G+V+LAL+
Sbjct: 215 CKGSKAKDAHKVYLLAKEKSKCPPKPALYFLIGSLC----RDDGTVNLALE 261


>ref|XP_004138984.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02650,
           mitochondrial-like [Cucumis sativus]
           gi|449477884|ref|XP_004155152.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g02650,
           mitochondrial-like [Cucumis sativus]
          Length = 479

 Score =  102 bits (254), Expect = 3e-20
 Identities = 56/111 (50%), Positives = 67/111 (60%)
 Frame = +2

Query: 8   EVYNKFGDFLCATNADSYYFTIEALCRRSIFDRVGLVCERMLSEEKIPETGKVGNIICYL 187
           EV N +    C  NA+SYYFT+EALCRRS +D    VCE+ML    +PE+ +VG II   
Sbjct: 157 EVLNSYEVLGCVPNAESYYFTVEALCRRSSYDLAWPVCEKMLDSGSMPESNRVGKIISLF 216

Query: 188 CKAGFVKEAHSVYLLAKEKQRYPAQSSVNFLISSLCDRKKNDPGSVHLALK 340
           CK    K AHSVYLLAKEK     Q  +N LI SLC     D  +V LAL+
Sbjct: 217 CKGNKAKNAHSVYLLAKEKHVNLPQCYMNILIHSLC----RDDETVKLALE 263


>ref|XP_003542095.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02650,
           mitochondrial-like [Glycine max]
          Length = 539

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 47/96 (48%), Positives = 64/96 (66%)
 Frame = +2

Query: 8   EVYNKFGDFLCATNADSYYFTIEALCRRSIFDRVGLVCERMLSEEKIPETGKVGNIICYL 187
           EV++KF  F C  +AD+YYFTIEALCRR  FD    VC++M+    +P+  KVG I+ +L
Sbjct: 217 EVFDKFEAFHCVPDADTYYFTIEALCRRRAFDWACGVCQKMVDARTLPDAEKVGAILSWL 276

Query: 188 CKAGFVKEAHSVYLLAKEKQRYPAQSSVNFLISSLC 295
           CK    KEAH VY++A EK + P  + V+FL+  LC
Sbjct: 277 CKGKKAKEAHGVYVVATEKGKLPPVNVVSFLVLKLC 312


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