BLASTX nr result

ID: Atractylodes22_contig00010283 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00010283
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAL79340.1|AC099402_4 Putative 22 kDa kafirin cluster; Ty3-Gy...    69   3e-10
ref|NP_001176105.1| Os10g0357350 [Oryza sativa Japonica Group] g...    69   3e-10
ref|XP_003562014.1| PREDICTED: uncharacterized protein LOC100838...    65   6e-09
gb|ABA93462.1| retrotransposon protein, putative, Ty3-gypsy subc...    64   1e-08
gb|AAL83344.1|AC074282_11 Putative polyprotein [Oryza sativa Jap...    64   1e-08

>gb|AAL79340.1|AC099402_4 Putative 22 kDa kafirin cluster; Ty3-Gypsy type [Oryza sativa]
           gi|21327374|gb|AAM48279.1|AC122148_32 Putative 22 kDa
           kafirin cluster; Ty3-Gypsy type [Oryza sativa Japonica
           Group] gi|31431495|gb|AAP53268.1| retrotransposon
           protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 1230

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 29/60 (48%), Positives = 39/60 (65%)
 Frame = +1

Query: 79  FHKQKPRTFSSASNPIDAEHWIRHLEKIFELMGCSDNTQVRLAAYMLEGDADQWWQTWKQ 258
           F K KP TFS  +NP++AE WI  +EK FE MGC+D  ++  A YML+  A +WW   K+
Sbjct: 74  FQKLKPPTFSGTANPLEAEEWIVAMEKSFEAMGCTDKEKIIYATYMLQSSAFEWWDAHKK 133


>ref|NP_001176105.1| Os10g0357350 [Oryza sativa Japonica Group]
           gi|255679330|dbj|BAH94833.1| Os10g0357350 [Oryza sativa
           Japonica Group]
          Length = 443

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 29/60 (48%), Positives = 39/60 (65%)
 Frame = +1

Query: 79  FHKQKPRTFSSASNPIDAEHWIRHLEKIFELMGCSDNTQVRLAAYMLEGDADQWWQTWKQ 258
           F K KP TFS  +NP++AE WI  +EK FE MGC+D  ++  A YML+  A +WW   K+
Sbjct: 162 FQKLKPPTFSGTANPLEAEEWIVAMEKSFEAMGCTDKEKIIYATYMLQSSAFEWWDAHKK 221


>ref|XP_003562014.1| PREDICTED: uncharacterized protein LOC100838358 [Brachypodium
           distachyon]
          Length = 361

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 28/77 (36%), Positives = 46/77 (59%)
 Frame = +1

Query: 25  PNNPLYETPQTLLQWAERFHKQKPRTFSSASNPIDAEHWIRHLEKIFELMGCSDNTQVRL 204
           P+N     P   +    RF + +P TF+S+  PI A+ W+R + K    +GC++  +VR 
Sbjct: 39  PHNNQNPNPPPQVDMLTRFLRLRPPTFTSSPEPIVADDWLRSVSKCLVTVGCNEADKVRF 98

Query: 205 AAYMLEGDADQWWQTWK 255
           AA++LEG A  WW+T++
Sbjct: 99  AAHLLEGPATAWWETYQ 115


>gb|ABA93462.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 1687

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 31/87 (35%), Positives = 44/87 (50%)
 Frame = +1

Query: 4   HAAGGAGPNNPLYETPQTLLQWAERFHKQKPRTFSSASNPIDAEHWIRHLEKIFELMGCS 183
           H+  G GP  PL E P         F + +P TFSS +NP++A  W+  +EK   L+ C+
Sbjct: 283 HSDSGNGPP-PLPENPTLAQSKLPEFLRVRPPTFSSTTNPMEANDWLHAIEKKLNLLQCN 341

Query: 184 DNTQVRLAAYMLEGDADQWWQTWKQVR 264
           D  +V  A + L+G A  WW      R
Sbjct: 342 DQEKVAFATHQLQGPASAWWDNHMATR 368


>gb|AAL83344.1|AC074282_11 Putative polyprotein [Oryza sativa Japonica Group]
           gi|20042905|gb|AAM08733.1|AC116601_26 Putative
           polyprotein [Oryza sativa Japonica Group]
           gi|31429938|gb|AAP51922.1| retrotransposon protein,
           putative, Ty3-gypsy subclass [Oryza sativa Japonica
           Group]
          Length = 1443

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 4/100 (4%)
 Frame = +1

Query: 10  AGGAGPNNPLY----ETPQTLLQWAERFHKQKPRTFSSASNPIDAEHWIRHLEKIFELMG 177
           + G GPNNP      E P         F + +P  FSS +NP++A  W+  +EK  +L+ 
Sbjct: 6   SNGNGPNNPNNNNNGENPTLAQNKLAEFLRVRPPVFSSTTNPVEAGDWLHAIEKKLDLLQ 65

Query: 178 CSDNTQVRLAAYMLEGDADQWWQTWKQVRGGNACVKNLTW 297
           C+D  +V  A++ L G A +WW  ++  R      + +TW
Sbjct: 66  CTDQEKVSFASHQLHGPASEWWDHFRLNR---ITAEPITW 102


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