BLASTX nr result

ID: Atractylodes22_contig00010280 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00010280
         (733 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264763.2| PREDICTED: polypyrimidine tract-binding prot...   325   6e-87
emb|CBI18226.3| unnamed protein product [Vitis vinifera]              325   6e-87
ref|XP_002302167.1| predicted protein [Populus trichocarpa] gi|2...   321   9e-86
ref|XP_002264689.2| PREDICTED: polypyrimidine tract-binding prot...   320   2e-85
gb|AEG89703.1| polypyrimidine tract-binding protein 1 [Solanum t...   318   7e-85

>ref|XP_002264763.2| PREDICTED: polypyrimidine tract-binding protein homolog 3 isoform 2
           [Vitis vinifera]
          Length = 432

 Score =  325 bits (833), Expect = 6e-87
 Identities = 161/175 (92%), Positives = 168/175 (96%)
 Frame = -1

Query: 526 MTESSKVIHIRNVGHEISEPDLLQLFQPFGVINKLVMLRAKNQALLQMQDVSSAVNAMQF 347
           MTE SKVIH+RNVGHEISE DLLQLFQPFGVI KLVMLRAKNQALLQMQDV SA NAMQF
Sbjct: 1   MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVPSAANAMQF 60

Query: 346 YANVQPSIRGRNVYVQFSSHQELTTMEQNTQGRGDEPNRILLVTIHHMLYPITVEVLHQV 167
           Y NVQPSIRGRNVYVQFSSHQELTT++QN QGRGDEPNRILLVTIHH+LYPITVEVLHQV
Sbjct: 61  YTNVQPSIRGRNVYVQFSSHQELTTVDQNAQGRGDEPNRILLVTIHHLLYPITVEVLHQV 120

Query: 166 FSPHGYVEKIVTFQKSAGFQALIQFQSRQSAVSARNSLQGRNIYDGCCQLDIQFS 2
           FSPHG+VEKIVTFQKSAGFQALIQ+QSRQSAV+ARNSLQGRNIYDGCCQLDIQFS
Sbjct: 121 FSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVAARNSLQGRNIYDGCCQLDIQFS 175


>emb|CBI18226.3| unnamed protein product [Vitis vinifera]
          Length = 443

 Score =  325 bits (833), Expect = 6e-87
 Identities = 161/175 (92%), Positives = 168/175 (96%)
 Frame = -1

Query: 526 MTESSKVIHIRNVGHEISEPDLLQLFQPFGVINKLVMLRAKNQALLQMQDVSSAVNAMQF 347
           MTE SKVIH+RNVGHEISE DLLQLFQPFGVI KLVMLRAKNQALLQMQDV SA NAMQF
Sbjct: 1   MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVPSAANAMQF 60

Query: 346 YANVQPSIRGRNVYVQFSSHQELTTMEQNTQGRGDEPNRILLVTIHHMLYPITVEVLHQV 167
           Y NVQPSIRGRNVYVQFSSHQELTT++QN QGRGDEPNRILLVTIHH+LYPITVEVLHQV
Sbjct: 61  YTNVQPSIRGRNVYVQFSSHQELTTVDQNAQGRGDEPNRILLVTIHHLLYPITVEVLHQV 120

Query: 166 FSPHGYVEKIVTFQKSAGFQALIQFQSRQSAVSARNSLQGRNIYDGCCQLDIQFS 2
           FSPHG+VEKIVTFQKSAGFQALIQ+QSRQSAV+ARNSLQGRNIYDGCCQLDIQFS
Sbjct: 121 FSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVAARNSLQGRNIYDGCCQLDIQFS 175


>ref|XP_002302167.1| predicted protein [Populus trichocarpa] gi|222843893|gb|EEE81440.1|
           predicted protein [Populus trichocarpa]
          Length = 436

 Score =  321 bits (823), Expect = 9e-86
 Identities = 158/175 (90%), Positives = 166/175 (94%)
 Frame = -1

Query: 526 MTESSKVIHIRNVGHEISEPDLLQLFQPFGVINKLVMLRAKNQALLQMQDVSSAVNAMQF 347
           MTE SKVIH+RNVGHEISE DLLQLFQPFGVI KLVMLRAKNQALLQMQDV SA+NA+Q 
Sbjct: 1   MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVPSAINALQL 60

Query: 346 YANVQPSIRGRNVYVQFSSHQELTTMEQNTQGRGDEPNRILLVTIHHMLYPITVEVLHQV 167
           Y N+QP+IRGRNVYVQFSSHQELTTM+QNTQGRGDEPNRILLVTIHHMLYPITVEVLHQV
Sbjct: 61  YTNIQPTIRGRNVYVQFSSHQELTTMDQNTQGRGDEPNRILLVTIHHMLYPITVEVLHQV 120

Query: 166 FSPHGYVEKIVTFQKSAGFQALIQFQSRQSAVSARNSLQGRNIYDGCCQLDIQFS 2
           FSPHG+VEKIVTFQKSAGFQALIQ+QSRQ AV AR SLQGRNIYDGCCQLDIQFS
Sbjct: 121 FSPHGFVEKIVTFQKSAGFQALIQYQSRQCAVQARTSLQGRNIYDGCCQLDIQFS 175


>ref|XP_002264689.2| PREDICTED: polypyrimidine tract-binding protein homolog 3 isoform 1
           [Vitis vinifera]
          Length = 445

 Score =  320 bits (820), Expect = 2e-85
 Identities = 161/177 (90%), Positives = 168/177 (94%), Gaps = 2/177 (1%)
 Frame = -1

Query: 526 MTESSKVIHIRNVGHEISEPDLLQLFQPFGVINKLVMLRAKNQALLQMQDVSSAVNAMQF 347
           MTE SKVIH+RNVGHEISE DLLQLFQPFGVI KLVMLRAKNQALLQMQDV SA NAMQF
Sbjct: 1   MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVPSAANAMQF 60

Query: 346 YANVQPSIRGRNVYVQFSSHQELTTMEQNTQGRGDE--PNRILLVTIHHMLYPITVEVLH 173
           Y NVQPSIRGRNVYVQFSSHQELTT++QN QGRGDE  PNRILLVTIHH+LYPITVEVLH
Sbjct: 61  YTNVQPSIRGRNVYVQFSSHQELTTVDQNAQGRGDEVSPNRILLVTIHHLLYPITVEVLH 120

Query: 172 QVFSPHGYVEKIVTFQKSAGFQALIQFQSRQSAVSARNSLQGRNIYDGCCQLDIQFS 2
           QVFSPHG+VEKIVTFQKSAGFQALIQ+QSRQSAV+ARNSLQGRNIYDGCCQLDIQFS
Sbjct: 121 QVFSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVAARNSLQGRNIYDGCCQLDIQFS 177


>gb|AEG89703.1| polypyrimidine tract-binding protein 1 [Solanum tuberosum]
          Length = 441

 Score =  318 bits (815), Expect = 7e-85
 Identities = 156/175 (89%), Positives = 168/175 (96%)
 Frame = -1

Query: 526 MTESSKVIHIRNVGHEISEPDLLQLFQPFGVINKLVMLRAKNQALLQMQDVSSAVNAMQF 347
           M++ SKV+H+RNVGHEISE DLLQLFQPFGVI KLVMLRAKNQALLQMQDV SAV A+QF
Sbjct: 1   MSDPSKVVHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVPSAVKALQF 60

Query: 346 YANVQPSIRGRNVYVQFSSHQELTTMEQNTQGRGDEPNRILLVTIHHMLYPITVEVLHQV 167
           Y+NVQPSIRGRNVYVQFSSHQELTTM+QN QGRGDEPNRILLVTIHHMLYPITV+VLHQV
Sbjct: 61  YSNVQPSIRGRNVYVQFSSHQELTTMDQNAQGRGDEPNRILLVTIHHMLYPITVDVLHQV 120

Query: 166 FSPHGYVEKIVTFQKSAGFQALIQFQSRQSAVSARNSLQGRNIYDGCCQLDIQFS 2
           FSPHG+VEKIVTFQKSAGFQALIQ+Q +QS+VSARNSLQGRNIYDGCCQLDIQFS
Sbjct: 121 FSPHGFVEKIVTFQKSAGFQALIQYQVQQSSVSARNSLQGRNIYDGCCQLDIQFS 175


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