BLASTX nr result

ID: Atractylodes22_contig00010206 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00010206
         (2059 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308172.1| predicted protein [Populus trichocarpa] gi|2...   136   2e-29
gb|ABN08132.1| Putative non-LTR retroelement reverse transcripta...   134   7e-29
ref|XP_003528143.1| PREDICTED: uncharacterized protein LOC100778...   133   2e-28
ref|XP_003526344.1| PREDICTED: uncharacterized protein LOC100799...   133   2e-28
gb|ABD32793.1| Putative non-LTR retroelement reverse transcripta...   132   3e-28

>ref|XP_002308172.1| predicted protein [Populus trichocarpa] gi|222854148|gb|EEE91695.1|
            predicted protein [Populus trichocarpa]
          Length = 670

 Score =  136 bits (342), Expect = 2e-29
 Identities = 98/345 (28%), Positives = 156/345 (45%), Gaps = 15/345 (4%)
 Frame = +3

Query: 69   ICHNK*TII-----DGGLNIQSLKVKNLALLAKWHWRYLDNEEALWKDVIAEFYG---SD 224
            IC+ + +II     DGGL I SL+ KN AL+ KW WR+   E ++WKDVI   Y    S 
Sbjct: 127  ICNVRWSIISLPKNDGGLGIGSLRDKNKALMFKWLWRFGSKESSMWKDVINNIYNTKCSS 186

Query: 225  DYIR-PNQLGNSVWNSILE--VNDLIERMGVGIKSSFFKTIANGSSSPFWDISVCAAGPK 395
              ++ P     S W+ I+   V D+  R+   +K      + NG    FW     A G  
Sbjct: 187  IILKYPIAGTGSTWSRIVNHCVTDI--RLQDIVKHQSVMLVGNGKRIKFWLDDWTATG-S 243

Query: 396  FKHLFPRLYAQEVNKNALFRERWTFEANSWKGNWCWRSTVRGRTLAELNSMEDLLRNMNF 575
                FP L+    +K A   +   ++ ++W   + W   +RGR    L+ M  +L  +  
Sbjct: 244  LADQFPALFRLTNDKEASLDKMGIWDGHAWHWLFTWSRPLRGRNYGLLDRMTAILSKVQL 303

Query: 576  RENGVDSWIWPVDSHGIFSVNXXXXXXXXXXAAPDGCDIFNHWSSTVPLKVNIFIWRMLL 755
             ++  D  IW  +S G FS+                      W   VP KV +F W  ++
Sbjct: 304  DKDAEDRLIWKANSTGRFSIKSLCGLLSPKPPMDTSFSFTGIWRGIVPPKVEVFCWMAII 363

Query: 756  NALPTKVNLQRRGI-NLGSVDCALCGSEEENLDHCLFRCAKVDSLWRKVWAWCGIS---S 923
              + T+  L RRGI ++ +  C +C +EEE++DH L  C K   +W K+  W G++    
Sbjct: 364  KKINTRSMLVRRGILDISAAACPICLAEEESVDHILLHCHKHWIVWSKIINWWGLAWCCP 423

Query: 924  LRMDSVLSFKNSLLSRDFHRNRSELIHAVLLVSLWLIWQWRNRVV 1058
              + ++ S  +SL+   F +    ++   L    W +W  RN V+
Sbjct: 424  KNLAALFSQWDSLVYGKFQKKAWLML---LFSVAWSLWLHRNDVI 465


>gb|ABN08132.1| Putative non-LTR retroelement reverse transcriptase, related
            [Medicago truncatula]
          Length = 532

 Score =  134 bits (338), Expect = 7e-29
 Identities = 104/372 (27%), Positives = 160/372 (43%), Gaps = 8/372 (2%)
 Frame = +3

Query: 105  LNIQSLKVKNLALLAKWHWRYLDNEEALWKDVIAEFYGS--DDYIRPNQLGNSVWNSILE 278
            + ++ +   NL+LL KW WR L ++E LW  V+   YG          + G+S W  +  
Sbjct: 162  VGVRRMGAFNLSLLGKWCWRMLVDKEGLWYRVLKARYGEIGGRLQEGGRQGSSWWKMLCH 221

Query: 279  VNDLI-ERMGVGIKSSFFKTIANGSSSPFWDISVCAAGPKFKHLFPRLYAQEVNKNALFR 455
            + D + E +G     +  + + +G+++ FW  S     P     FPRL+   VNK     
Sbjct: 222  IRDGVGEGVGNWFDENIRRVVGDGNNTFFWYDSWVGEMPLCTK-FPRLFDLAVNKECSVG 280

Query: 456  ERWTFEANSWKGNWCWRSTVRGRTLAELNSMED---LLRNMNFRENGVDSWIWPVDSHGI 626
            E  T         W WR   RG    E +S+ +   LL N+  + N  D W W +D    
Sbjct: 281  EMVTLGWAEGGRAWVWR---RGLLAWEEDSVRECTLLLHNVVLQVNVPDKWSWLLDPING 337

Query: 627  FSVNXXXXXXXXXXAAPDGCDIFNHWSSTVPLKVNIFIWRMLLNALPTKVNLQRRGINLG 806
            +SV              D   + + W   +P KV++F+WR+L N LPTK NL RR I L 
Sbjct: 338  YSVRESYRHITTSGEYVDQSVVDDVWHRYIPQKVSLFVWRLLRNRLPTKDNLMRRRIILA 397

Query: 807  S-VDCALCGSEEENLDHCLFRCAKVDSLWRKVWAWCGISSLRMDSVLS-FKNSLLSRDFH 980
            + VDC     + E+  H    C     +W  V  W GIS++    +   F    L     
Sbjct: 398  NVVDCVYECGKLESATHLFLDCRIPTMVWLHVQNWIGISTVSPSQMREHFTQFTLMAGMP 457

Query: 981  RNRSELIHAVLLVSLWLIWQWRNRVVHSSQEDAVRVLQEDLFPGVQRLASLWILNRKPRL 1160
            R+   +   +    +W+IW+ RN  V ++      V    LF  V+  + LW+  + P L
Sbjct: 458  RSSHSVFKVIWFAYVWVIWKDRNNRVFNNTGSNHSV----LFEKVKLNSFLWLKAKCPSL 513

Query: 1161 KVYWQQWSSFPL 1196
               +  W   PL
Sbjct: 514  NFGYHDWWQHPL 525


>ref|XP_003528143.1| PREDICTED: uncharacterized protein LOC100778359 [Glycine max]
          Length = 2621

 Score =  133 bits (334), Expect = 2e-28
 Identities = 96/368 (26%), Positives = 142/368 (38%), Gaps = 6/368 (1%)
 Frame = +3

Query: 99   GGLNIQSLKVKNLALLAKWHWRYLDNEEALWKDVIAEFYGSDDYIRPNQLGNSVWNSILE 278
            GGL I+ +   N+ALL KW W  +  + ALW  V+   YG    +     GNS   SI  
Sbjct: 1469 GGLGIKDIHTFNMALLGKWMWNLMYQQGALWVAVLEAKYGGWRGLVGE--GNSSCQSIWW 1526

Query: 279  VNDLIERM-----GVGIKSSFFKTIANGSSSPFWDISVCAAGPKFKHLFPRLYAQEVNKN 443
              DLI+ M     G  +       +  G    FW+    +        +PRLY    ++ 
Sbjct: 1527 -RDLIKVMHMPYNGKTLYQQIKWKVEAGDKVRFWEDRWISHDQSLAEKYPRLYVNSNHQY 1585

Query: 444  ALFRERWTFEANSWKGNWCWRSTVRGRTLAELNSMEDLLRNMNFRENGVDSWIWPVDSHG 623
             L           W  N+ WR  +  R +    S    +  ++    G D+W+W  ++ G
Sbjct: 1586 QLVGSLGQHSNLGWNWNFSWRCQLFDREIESAISFLSEVEGISINSQGSDTWVWTAEASG 1645

Query: 624  IFSVNXXXXXXXXXXAAPDGCDIFNH-WSSTVPLKVNIFIWRMLLNALPTKVNLQRRGIN 800
            IFS            A  +  D F   W   +P K  +F WR+L + LPTK NL+ R + 
Sbjct: 1646 IFSTRSAYSSFWEEVAVDNLHDCFKDLWKIKIPSKFLMFAWRLLWDRLPTKANLRARQVQ 1705

Query: 801  LGSVDCALCGSEEENLDHCLFRCAKVDSLWRKVWAWCGISSLRMDSVLSFKNSLLSRDFH 980
            +  + C  C   EE   H    C K   +W +   W  +      S+        S    
Sbjct: 1706 ISDLTCPFCRRVEETASHMFIHCIKTQPIWWETMNWINMQGPLPWSITDHFMQFSSLKEA 1765

Query: 981  RNRSELIHAVLLVSLWLIWQWRNRVVHSSQEDAVRVLQEDLFPGVQRLASLWILNRKPRL 1160
              RS       +   W IWQ RN +V S+       L ED       L   W+ N +   
Sbjct: 1766 GIRSRRWQWWWMAVTWSIWQLRNSIVFSNATFDGNKLVED----ASFLLWTWLHNLEKDF 1821

Query: 1161 KVYWQQWS 1184
             +++ QWS
Sbjct: 1822 SLHFNQWS 1829


>ref|XP_003526344.1| PREDICTED: uncharacterized protein LOC100799415 [Glycine max]
          Length = 3081

 Score =  133 bits (334), Expect = 2e-28
 Identities = 86/347 (24%), Positives = 152/347 (43%), Gaps = 9/347 (2%)
 Frame = +3

Query: 96   DGGLNIQSLKVKNLALLAKWHWRYLDNEEALWKDVIAEFYGS-DDYIRPNQLGNSV--WN 266
            +GGL I+ ++  N ALL KW W      + LW  ++A  YG     +   ++ N    W 
Sbjct: 2228 NGGLGIKDIRTFNKALLGKWRWDLFHQHKELWARILASKYGGWRSLVDAKRVSNESVWWQ 2287

Query: 267  SILEVNDLIERMGVGIKSSFFKTIANGSSSPFWDISVCAAGPKFKHLFPRLYAQEVNKNA 446
             +L V    +   +  + + ++ +  G     W+     +G      +PRLY     +  
Sbjct: 2288 DLLAVTHDQQFNNILNEGTMWR-VGCGDKIRLWEDRWTGSGQPLMLKYPRLYQISSQQQK 2346

Query: 447  LFRERWTFEANSWKGNWCWRSTVRGRTLAELNSMEDLLRNMNFRENGVDSWIWPVDSHGI 626
            L  +  TF  ++W+ N  WR  +    +A      + + ++  +++  DSW W  +S+G 
Sbjct: 2347 LILQMGTFIQSAWEWNLLWRRPLFDNEVASAVGFLEDISHITLQQHEADSWTWKHESNGY 2406

Query: 627  FSVNXXXXXXXXXXAAPDGCDIFNH-WSSTVPLKVNIFIWRMLLNALPTKVNLQRRGINL 803
            +S                  DIF   W   +P K  IF WR++ + LPTK NL+RR I++
Sbjct: 2407 YSSRSAYRLLQGISDVASMDDIFKDLWKLKIPTKATIFAWRLIRDRLPTKSNLRRRQIDI 2466

Query: 804  GSVDCALCGSEEENLDHCLFRCAKVDSLWRKVWAWCGISSLRMDSVLSFKNSLLSRDFHR 983
                C  C  ++E   H  F C+K+  LW +  +W G S       ++ ++  L  +   
Sbjct: 2467 SDSLCPFCSIKDETASHLFFECSKIQHLWWESQSWIGTSGA---YPINPRHHFLQHNIGM 2523

Query: 984  NRSELIH--AVLLVSL-WLIWQWRNRVV--HSSQEDAVRVLQEDLFP 1109
               ++        V+L W IWQ RN+++   SS +   + +  D+ P
Sbjct: 2524 KGGKIYKRWKCWWVALNWSIWQQRNKILSNQSSHQIIAKGVISDISP 2570


>gb|ABD32793.1| Putative non-LTR retroelement reverse transcriptase, related
            [Medicago truncatula]
          Length = 373

 Score =  132 bits (333), Expect = 3e-28
 Identities = 101/357 (28%), Positives = 164/357 (45%), Gaps = 10/357 (2%)
 Frame = +3

Query: 102  GLNIQSLKVKNLALLAKWHWRYLDNEEALWKDVIAEFYGS-DDYIRPNQLGNSVWNSILE 278
            G  ++ L+  N++LL KW WR L++ E+LW  V+   YG     +R  +   S+W S L 
Sbjct: 2    GFGVKRLREFNISLLGKWVWRVLEDRESLWNVVLRAKYGEVGGRVRFCEGVGSIWWSHL- 60

Query: 279  VNDLIERMGVGIKSSFF------KTIANGSSSPFWDISVCAAGPKFKHLFPRLYAQEVNK 440
             N +  R GVG+  + +      + + + S++ FW+       P     F RL+    NK
Sbjct: 61   -NQI--RSGVGLAETTWLVDNIVRKVEDESTTMFWEDPWLLDVP-LAVSFSRLFELSENK 116

Query: 441  NALFRERWTFEANSWKGNWCWRSTVRGRTLAELNSMEDLLRNMNFRENGVDSWIWPVDSH 620
            +   RE +     +  G W WR  +       +    + L N   + +  + W+W + S 
Sbjct: 117  DVTVREMFLLGWGADGGAWRWRRRLFAWEEELVGECVERLVNFVLQVDMTNRWVWRLHSS 176

Query: 621  GIFSVNXXXXXXXXXXAAPDGCDIFNHWSSTVPLKVNIFIWRMLLNALPTKVNLQRRGI- 797
             ++ V+                     W   VPLKVNIF+WR+ LN L TK NL++R + 
Sbjct: 177  QLYMVHSAYSYLTAVDTNITAEFDQFLWLKAVPLKVNIFVWRLFLNRLATKDNLRKRNVL 236

Query: 798  NLGSVDC-ALCGSEEENLDHCLFRCAKVDSLWRKVWAWCGISSLRMDSVLSFKNSLLS-R 971
                V C ALCG EEE +DH  F+C     LW  +  W G  ++   ++ +  N   + R
Sbjct: 237  EATYVSCGALCGKEEE-MDHLFFQCDYYGQLWLLISNWLGFVTVFHGNLYTHDNQFCALR 295

Query: 972  DFHRNRSELIHAVLLVSLWLIWQWRNRVVHSSQEDAVRVLQEDLFPGVQRLASLWIL 1142
            DF +N  +    + +  L+ IW+ RNR +  +Q D +  L E +     +L + W L
Sbjct: 296  DFSKNSMKAFTIIWISVLFTIWKDRNRRIFQNQIDHLEALLERV-----KLQTFWWL 347


Top