BLASTX nr result

ID: Atractylodes22_contig00010205 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00010205
         (448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632276.1| PREDICTED: putative SWI/SNF-related matrix-a...   204   6e-51
emb|CBI17093.3| unnamed protein product [Vitis vinifera]              204   6e-51
ref|XP_002270098.1| PREDICTED: putative SWI/SNF-related matrix-a...   204   6e-51
ref|XP_002527439.1| DNA repair helicase rad5,16, putative [Ricin...   203   1e-50
ref|XP_002328182.1| chromatin remodeling complex subunit [Populu...   190   9e-47

>ref|XP_003632276.1| PREDICTED: putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 2-like [Vitis vinifera]
          Length = 1029

 Score =  204 bits (519), Expect = 6e-51
 Identities = 101/148 (68%), Positives = 117/148 (79%)
 Frame = +2

Query: 2   PSPGKFXXXXXXXQPTACSEIVRFSTLASGEIGRIPNEWSRCLLPLVRDKKVQIEGFCKS 181
           PSPGK        Q  ACSEIVRFST  SGE+GRIPNEW+RCLLPLVRDKKV+IEGFCK+
Sbjct: 151 PSPGKLTGRGR--QMGACSEIVRFSTKESGEVGRIPNEWARCLLPLVRDKKVKIEGFCKA 208

Query: 182 APDILGLMDTIDLRVSVYINSSMLHKSHQTSPKVPSSSNDETAIQPLPILFRLLGLVPFK 361
           APD+LG+MDTI L +SVYINSSM  K  QTS +  S+S++E+ +  LP LFRLLGL PFK
Sbjct: 209 APDVLGIMDTILLSISVYINSSMFRKCQQTSLRAASNSSEESVVHALPTLFRLLGLTPFK 268

Query: 362 KAEFTPSDLYTRKRPLDIKDGSGVPARL 445
           KAEF+P DLYTRKRPL+ KD SG+P  L
Sbjct: 269 KAEFSPDDLYTRKRPLESKDNSGIPGLL 296


>emb|CBI17093.3| unnamed protein product [Vitis vinifera]
          Length = 1025

 Score =  204 bits (519), Expect = 6e-51
 Identities = 101/148 (68%), Positives = 117/148 (79%)
 Frame = +2

Query: 2   PSPGKFXXXXXXXQPTACSEIVRFSTLASGEIGRIPNEWSRCLLPLVRDKKVQIEGFCKS 181
           PSPGK        Q  ACSEIVRFST  SGE+GRIPNEW+RCLLPLVRDKKV+IEGFCK+
Sbjct: 147 PSPGKLTGRGR--QMGACSEIVRFSTKESGEVGRIPNEWARCLLPLVRDKKVKIEGFCKA 204

Query: 182 APDILGLMDTIDLRVSVYINSSMLHKSHQTSPKVPSSSNDETAIQPLPILFRLLGLVPFK 361
           APD+LG+MDTI L +SVYINSSM  K  QTS +  S+S++E+ +  LP LFRLLGL PFK
Sbjct: 205 APDVLGIMDTILLSISVYINSSMFRKCQQTSLRAASNSSEESVVHALPTLFRLLGLTPFK 264

Query: 362 KAEFTPSDLYTRKRPLDIKDGSGVPARL 445
           KAEF+P DLYTRKRPL+ KD SG+P  L
Sbjct: 265 KAEFSPDDLYTRKRPLESKDNSGIPGLL 292


>ref|XP_002270098.1| PREDICTED: putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 2-like isoform 2 [Vitis vinifera]
          Length = 1016

 Score =  204 bits (519), Expect = 6e-51
 Identities = 101/148 (68%), Positives = 117/148 (79%)
 Frame = +2

Query: 2   PSPGKFXXXXXXXQPTACSEIVRFSTLASGEIGRIPNEWSRCLLPLVRDKKVQIEGFCKS 181
           PSPGK        Q  ACSEIVRFST  SGE+GRIPNEW+RCLLPLVRDKKV+IEGFCK+
Sbjct: 138 PSPGKLTGRGR--QMGACSEIVRFSTKESGEVGRIPNEWARCLLPLVRDKKVKIEGFCKA 195

Query: 182 APDILGLMDTIDLRVSVYINSSMLHKSHQTSPKVPSSSNDETAIQPLPILFRLLGLVPFK 361
           APD+LG+MDTI L +SVYINSSM  K  QTS +  S+S++E+ +  LP LFRLLGL PFK
Sbjct: 196 APDVLGIMDTILLSISVYINSSMFRKCQQTSLRAASNSSEESVVHALPTLFRLLGLTPFK 255

Query: 362 KAEFTPSDLYTRKRPLDIKDGSGVPARL 445
           KAEF+P DLYTRKRPL+ KD SG+P  L
Sbjct: 256 KAEFSPDDLYTRKRPLESKDNSGIPGLL 283


>ref|XP_002527439.1| DNA repair helicase rad5,16, putative [Ricinus communis]
           gi|223533174|gb|EEF34931.1| DNA repair helicase rad5,16,
           putative [Ricinus communis]
          Length = 1028

 Score =  203 bits (516), Expect = 1e-50
 Identities = 103/149 (69%), Positives = 118/149 (79%), Gaps = 1/149 (0%)
 Frame = +2

Query: 5   SPGKFXXXXXXXQP-TACSEIVRFSTLASGEIGRIPNEWSRCLLPLVRDKKVQIEGFCKS 181
           SP +        QP TACSEIVRFST  SGE+GRIPNEW+RCLLPLVR KKV+IEG+CKS
Sbjct: 147 SPSQGKAFGKGRQPATACSEIVRFSTRDSGEVGRIPNEWARCLLPLVRYKKVRIEGYCKS 206

Query: 182 APDILGLMDTIDLRVSVYINSSMLHKSHQTSPKVPSSSNDETAIQPLPILFRLLGLVPFK 361
           APDILG+MDTI L +SVYINS++     QTS K  S+  +ET + PLP LFRLLGL PFK
Sbjct: 207 APDILGIMDTILLSISVYINSALFRMHQQTSLKAVSNPTEETIVHPLPNLFRLLGLTPFK 266

Query: 362 KAEFTPSDLYTRKRPLDIKDGSGVPARLL 448
           KAEFTP+DLYTRKRPL+ KDGSG+PA LL
Sbjct: 267 KAEFTPADLYTRKRPLNSKDGSGIPALLL 295


>ref|XP_002328182.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222837697|gb|EEE76062.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 896

 Score =  190 bits (483), Expect = 9e-47
 Identities = 100/155 (64%), Positives = 115/155 (74%), Gaps = 6/155 (3%)
 Frame = +2

Query: 2   PSPGKFXXXXXXXQPTACSEIVRFSTLASGEIGRIPNEWSRCLLPLVRDKKVQIEGFCKS 181
           PSPGK          TACSEIVRFST  SGE+GRIPN+W+RCLLPLVRD KV+I G CKS
Sbjct: 43  PSPGK-GSGRRRQTATACSEIVRFSTKDSGELGRIPNDWARCLLPLVRDGKVRIMGCCKS 101

Query: 182 APDILGLMDTIDLRVSVYINSSMLHKSHQTSPKVPSSSNDETAIQPLPILFRLLGLVPFK 361
           AP++LG+MDTI L +SVY+NS M HK HQTS K  ++S +ET   PL ILF LLGL PFK
Sbjct: 102 APNVLGIMDTIQLSISVYLNSVMFHKHHQTSLKATANSTEETVGHPLSILFCLLGLTPFK 161

Query: 362 KAEFTPSDLYTRKRPLDIK------DGSGVPARLL 448
           KAEFTP+DL TRKRPL+ K      DGSG+P  LL
Sbjct: 162 KAEFTPADLNTRKRPLNSKVKKQGLDGSGLPVSLL 196


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