BLASTX nr result

ID: Atractylodes22_contig00010201 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00010201
         (1006 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_191479.1| F-box/LRR-repeat protein [Arabidopsis thaliana]...    82   1e-25
ref|XP_002876492.1| predicted protein [Arabidopsis lyrata subsp....    60   3e-18
ref|XP_002316907.1| predicted protein [Populus trichocarpa] gi|2...    60   7e-14
ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-13
ref|NP_001030887.1| F-box protein [Arabidopsis thaliana] gi|3326...    78   4e-12

>ref|NP_191479.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
           gi|75264308|sp|Q9LX51.1|FBL64_ARATH RecName:
           Full=F-box/LRR-repeat protein At3g59200
           gi|7801670|emb|CAB91590.1| putative protein [Arabidopsis
           thaliana] gi|26450835|dbj|BAC42525.1| unknown protein
           [Arabidopsis thaliana] gi|29028916|gb|AAO64837.1|
           At3g59200 [Arabidopsis thaliana]
           gi|332646367|gb|AEE79888.1| F-box/LRR-repeat protein
           [Arabidopsis thaliana]
          Length = 520

 Score = 81.6 bits (200), Expect(2) = 1e-25
 Identities = 48/99 (48%), Positives = 56/99 (56%), Gaps = 8/99 (8%)
 Frame = -2

Query: 960 DRLSSLPEEVVSHILSLMPTKLAVRTSILSKRWRYRWTMVRNLDFDDIHPVHGLP----- 796
           DR+SSLP  VVSHILS +PTK A  TS+LSK+WRY +  V NLDFDD     G P     
Sbjct: 7   DRISSLPNPVVSHILSFLPTKEAASTSVLSKKWRYLFAYVTNLDFDDSDYQDGKPKSDVE 66

Query: 795 ---HLMEFVDQVLELCKTSEVQLFRLRFLEISVPKSRVS 688
                MEFVD+VL L     V  F L      V  +RV+
Sbjct: 67  LSRSFMEFVDRVLALQGNGSVNKFSLECSNYDVDLARVT 105



 Score = 62.0 bits (149), Expect(2) = 1e-25
 Identities = 53/153 (34%), Positives = 74/153 (48%), Gaps = 5/153 (3%)
 Frame = -3

Query: 578 VSELDIQVILTELPLSLFNCKTLTSLRLVQNGNDLDVWNFPSSVNLPSLKTL--DILMFS 405
           VSELD+ ++   LP  +F  KTL  L+L    NDL +      V LP LKTL  D +   
Sbjct: 116 VSELDLSILEYPLPSEIFVSKTLVRLKL-GPANDLTLTLDRKDVFLPKLKTLYIDCVDVQ 174

Query: 404 KPYLNALKLLRGSPLLESLSLHVWRNGEEEYNF---NIPTLKRLELRTEKCIWVINKIVL 234
           +     +KLL G P+LE L L     G E + F   ++ TLKRL    E+       +  
Sbjct: 175 ERGFGFVKLLSGCPVLEELVL--MNIGWENWKFCSVSVKTLKRLTFFCEETYENPKSVSF 232

Query: 233 NVPNLEYLFVGGELESIFVMEDLSSLVEVTISV 135
           + PNL YL     + S +   + +SLVE  I +
Sbjct: 233 DTPNLVYLEYSDAIASKYPKVNFNSLVEAHIGL 265


>ref|XP_002876492.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297322330|gb|EFH52751.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 478

 Score = 60.1 bits (144), Expect(2) = 3e-18
 Identities = 40/104 (38%), Positives = 54/104 (51%), Gaps = 13/104 (12%)
 Frame = -2

Query: 960 DRLSSLPEEVVSHILSLMPTKLAVRTSILSKRWRYRWTMVRNLDFDD---IH--PVHGLP 796
           D ++ LP+ ++ HILS + TK A  TS+LS+RWRY    V NL+FDD   +H    H  P
Sbjct: 7   DMINVLPDALLCHILSYLTTKEAASTSLLSRRWRYLLAFVPNLEFDDSVFLHRDKRHDKP 66

Query: 795 --------HLMEFVDQVLELCKTSEVQLFRLRFLEISVPKSRVS 688
                     MEFVD+VL L     +  F L      V  +RV+
Sbjct: 67  KSDDELSTSFMEFVDRVLALQGNGTINRFSLDCSNYDVDLARVT 110



 Score = 58.5 bits (140), Expect(2) = 3e-18
 Identities = 51/153 (33%), Positives = 72/153 (47%), Gaps = 5/153 (3%)
 Frame = -3

Query: 578 VSELDIQVILTELPLSLFNCKTLTSLRLVQNGNDLDVWNFPSSVNLPSLKTL--DILMFS 405
           VS+LD+ ++   LP  +F  KTL  L+L    NDL +      V LP LKTL  D +   
Sbjct: 121 VSDLDLSLLEYSLPSEIFVSKTLVKLKL-GPANDLTLTIDRKDVFLPKLKTLYIDSVEVQ 179

Query: 404 KPYLNALKLLRGSPLLESLSLHVWRNGEEEYNF---NIPTLKRLELRTEKCIWVINKIVL 234
           +     +KLL G P+LE L L     G E + F   ++ TLKRL    E        +  
Sbjct: 180 ERGFGFVKLLSGCPVLEELVL--MNIGWENWKFCSVSVKTLKRLTFFCEDSYENPKSVSF 237

Query: 233 NVPNLEYLFVGGELESIFVMEDLSSLVEVTISV 135
           + PNL YL     +   +   + +SLVE  I +
Sbjct: 238 DTPNLVYLEYSDAIAGKYPKVNFNSLVEAHIGL 270


>ref|XP_002316907.1| predicted protein [Populus trichocarpa] gi|222859972|gb|EEE97519.1|
           predicted protein [Populus trichocarpa]
          Length = 462

 Score = 59.7 bits (143), Expect(2) = 7e-14
 Identities = 39/95 (41%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
 Frame = -2

Query: 966 NADRLSSLPEEVVSHILSLMPTKLAVRTSILSKRWRYRWTMVRNLDFDDIHPVHGLPHLM 787
           N D +S LP  ++ HILS +PTK A+ T ILSK WR  W  + N DFDD           
Sbjct: 14  NKDMISDLPNVIIGHILSFLPTKDALCTCILSKSWRELWRSLSNFDFDD-RTWKSKIIFG 72

Query: 786 EFVDQVLELCKTSE--VQLFRLRFLEISVPKSRVS 688
            F+D+   L  + E  +  FRLR +  S P SR+S
Sbjct: 73  NFMDRFCYLHNSRENSITKFRLR-VNGSYPSSRMS 106



 Score = 44.3 bits (103), Expect(2) = 7e-14
 Identities = 59/230 (25%), Positives = 96/230 (41%), Gaps = 35/230 (15%)
 Frame = -3

Query: 590 VRLNVSELDIQVILTE---LPLSLFNCKTLTSLRLVQNGNDLDVWNFPSSVNLPSLKTLD 420
           ++ N+ EL + +   +   LP  +F+C+ L  L L   G  +D+      V+ P LK L 
Sbjct: 113 IKDNLEELKLWIYTADHVPLPRRIFSCEKLVILDL---GYRIDIDLLGVGVHFPCLKVLH 169

Query: 419 I--LMFSKPYLNALKLLRGSPLLESLSL-HVWRNGEEEYNFNIPTLKRLELRTEKCIW-- 255
           +  L     + +  KLL GSP+LE L + H              +LKRL +R     +  
Sbjct: 170 LQELPMLDDHASIEKLLAGSPVLEELKIEHEDCESRNVLRICSSSLKRLIIRFPFVAYDE 229

Query: 254 ---VINKIVLNVPNLEYLFVGGEL-ESIFVMEDLSSLVEVTISVCGVR--------YAYL 111
                 ++ L+ PNLE L +   + E + +++   SLVE  +SV            Y  +
Sbjct: 230 KDPGCRELTLDTPNLELLKLTDLVSEKLNMLQIPYSLVEAALSVAYKHVFTIQVDDYIDM 289

Query: 110 LVELLKGIRGAKSLSWFCETI---------------DVPSILPLPKFPNL 6
            V+LL+ I     +   C+T                 +P +  LP F NL
Sbjct: 290 AVQLLRPIMTIVKILRLCDTTMRTSPLQTLSDAVHKKLPCVGNLPDFQNL 339


>ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|222859667|gb|EEE97214.1|
           predicted protein [Populus trichocarpa]
          Length = 460

 Score = 57.4 bits (137), Expect(2) = 2e-13
 Identities = 37/89 (41%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
 Frame = -2

Query: 954 LSSLPEEVVSHILSLMPTKLAVRTSILSKRWRYRWTMVRNLDFDDI-HPVHGLPHLMEFV 778
           + +LP+ ++ HILS + T+ AVRTSILSK+W + W    NL F  +  P   L   M+FV
Sbjct: 28  IGNLPDALLEHILSFLSTEAAVRTSILSKKWLHLWKSTTNLTFFGLKSPKRKL--FMDFV 85

Query: 777 DQVLELCKTSEVQLFRLRFLEISVPKSRV 691
           D+VL L   S +  F L   E+    SRV
Sbjct: 86  DRVLALRGPSNIVQFYLS-CEVKDDPSRV 113



 Score = 45.1 bits (105), Expect(2) = 2e-13
 Identities = 60/217 (27%), Positives = 96/217 (44%), Gaps = 22/217 (10%)
 Frame = -3

Query: 590 VRLNVSELDIQVILTE----LPLSLFNCKTLTSLRLVQNGNDLDVWNFPSSVNLPSLKTL 423
           V  NV +L +++   E    LP  LFNC+TLT L +    N   +   PSS++L  LK L
Sbjct: 121 VNRNVKDLYLELRDFEASFVLPHCLFNCETLTELEI----NMPYILKLPSSISLSCLKIL 176

Query: 422 DILMFSKPYLNALKLLRGSPLLESLSLHV--WRNGEEEYNFNIPTLKRLELRTEKC---- 261
           ++        ++ + L   P L  L +H   W N     + + P L+ L++  E C    
Sbjct: 177 NLYEVIFTDDHSTQQLFSLPNLVELEIHECNWMN-LVAVSISAPKLQSLDIH-EPCQSSP 234

Query: 260 --IWVINKIVLNVPNLEYLFVGGELESIFVMEDLSSLVEVTISVCGV-----RYAYLLVE 102
             +   +  +      ++  +G       + E  SS+VE  IS+        + AY   +
Sbjct: 235 ASLGGCHVRIFGTHLADFTIIGTLSNDYCLYE--SSVVETCISIFSAADKPRQTAYRASK 292

Query: 101 LLKGIRGAKSLSWFCETIDV----PSILPLP-KFPNL 6
           LL+GI  A+SL      +DV    P +L  P +F NL
Sbjct: 293 LLEGISSAQSLCLTTNVVDVLDDAPELLAFPLEFRNL 329


>ref|NP_001030887.1| F-box protein [Arabidopsis thaliana] gi|332646338|gb|AEE79859.1|
           F-box protein [Arabidopsis thaliana]
          Length = 345

 Score = 77.8 bits (190), Expect = 4e-12
 Identities = 48/100 (48%), Positives = 59/100 (59%), Gaps = 10/100 (10%)
 Frame = -2

Query: 960 DRLSSLPEEVVSHILSLMPTKLAVRTSILSKRWRYRWTMVRNLDFDDI---HPVHGLPH- 793
           DR+ SLP+E++SHILS + TK A  TS+LSKRWRY    V NL FDDI   HP  G P  
Sbjct: 2   DRVGSLPDELLSHILSFLTTKEAALTSLLSKRWRYLIAFVPNLAFDDIVFLHPEEGKPER 61

Query: 792 ------LMEFVDQVLELCKTSEVQLFRLRFLEISVPKSRV 691
                  M+FVD+VL L   S ++ F L+   I V   RV
Sbjct: 62  DEIRQSFMDFVDRVLALQAESPIKKFSLK-CRIGVDSDRV 100


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